RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-216ENST00000509784 ALDH2P05091 517 aa3.98□□□□□ -1.77
CALCOCO2-216ENST00000509784 C1QTNF9P0C862 333 aa3.98□□□□□ -1.77
CALCOCO2-216ENST00000509784 ZNF888P0CJ79 500 aaPredicted RBP3.98□□□□□ -1.77
CALCOCO2-216ENST00000509784 MED14OSP0DP75 135 aa3.98□□□□□ -1.77
CALCOCO2-216ENST00000509784 TRIM27P14373 513 aa3.98□□□□□ -1.77
CALCOCO2-216ENST00000509784 SARSP49591 514 aaKnown RBP3.98□□□□□ -1.77
CALCOCO2-216ENST00000509784 MRE11P49959 708 aa3.98□□□□□ -1.77
CALCOCO2-216ENST00000509784 PER3P56645 1201 aa3.98□□□□□ -1.77
CALCOCO2-216ENST00000509784 PURAQ00577 322 aaKnown RBP3.98□□□□□ -1.77
CALCOCO2-216ENST00000509784 DSC2Q02487 901 aa3.98□□□□□ -1.77
CALCOCO2-216ENST00000509784 UBE4AQ14139 1066 aa3.98□□□□□ -1.77
CALCOCO2-216ENST00000509784 GALEQ14376 348 aa3.98□□□□□ -1.77
CALCOCO2-216ENST00000509784 VWA3BQ502W6 1294 aa3.98□□□□□ -1.77
CALCOCO2-216ENST00000509784 COBLL1Q53SF7 1204 aa3.98□□□□□ -1.77
CALCOCO2-216ENST00000509784 CCDC157Q569K6 752 aa3.98□□□□□ -1.77
CALCOCO2-216ENST00000509784 OVCH2Q7RTZ1 564 aa3.98□□□□□ -1.77
CALCOCO2-216ENST00000509784 GPR155Q7Z3F1 870 aa3.98□□□□□ -1.77
CALCOCO2-216ENST00000509784 TXNDC5Q8NBS9 432 aaKnown RBP3.98□□□□□ -1.77
CALCOCO2-216ENST00000509784 SNX33Q8WV41 574 aa3.98□□□□□ -1.77
CALCOCO2-216ENST00000509784 GCDHQ92947 438 aaPredicted RBP3.98□□□□□ -1.77
CALCOCO2-216ENST00000509784 RAB24Q969Q5 203 aa3.98□□□□□ -1.77
CALCOCO2-216ENST00000509784 SARGQ9BW04 601 aa3.98□□□□□ -1.77
CALCOCO2-216ENST00000509784 KATNBL1Q9H079 304 aa3.98□□□□□ -1.77
CALCOCO2-216ENST00000509784 FAM204AQ9H8W3 233 aa3.98□□□□□ -1.77
CALCOCO2-216ENST00000509784 BARX1Q9HBU1 254 aaPredicted RBP3.98□□□□□ -1.77
CALCOCO2-216ENST00000509784 TLR9Q9NR96 1032 aa3.98□□□□□ -1.77
CALCOCO2-216ENST00000509784 CHST12Q9NRB3 414 aa3.98□□□□□ -1.77
CALCOCO2-216ENST00000509784 ING3Q9NXR8 418 aa3.98□□□□□ -1.77
CALCOCO2-216ENST00000509784 PTPN22Q9Y2R2 807 aa3.98□□□□□ -1.77
CALCOCO2-216ENST00000509784 PCDHB1Q9Y5F3 818 aa3.98□□□□□ -1.77
CALCOCO2-216ENST00000509784 CFAP20Q9Y6A4 193 aaKnown RBP3.98□□□□□ -1.77
CALCOCO2-216ENST00000509784 CLIP1P30622 1438 aa3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 SH3D21A4FU49 640 aa3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 H3BML4 177 aa3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 RFXAPO00287 272 aa3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 TPP1O14773 563 aa3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 FFAR3O14843 346 aa3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 TUSC2O75896 110 aa3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 FTLP02792 175 aaPredicted RBP3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 KRT1P04264 644 aa3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 RPLP2P05387 115 aaKnown RBP3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 NBPF7P0C2Y1 421 aaPredicted RBP3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 SYN1P17600 705 aa3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 ECHS1P30084 290 aa3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 SLC6A9P48067 706 aa3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 USP14P54578 494 aa3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 RHBDL3P58872 404 aa3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 HDAC1Q13547 482 aaPredicted RBP3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 USP10Q14694 798 aaKnown RBP3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 ACAP1Q15027 740 aa3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 VMACQ2NL98 169 aa3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 ZNF385BQ569K4 471 aa3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 C19orf54Q5BKX5 351 aa3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 MCTP1Q6DN14 999 aa3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 PPP4R3AQ6IN85 833 aa3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 CCDC149Q6ZUS6 474 aa3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 Q6ZVL8 140 aa3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 CHST15Q7LFX5 561 aaPredicted RBP3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 TAS1R1Q7RTX1 841 aa3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 CLEC14AQ86T13 490 aa3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 REXO1L1PQ8IX06 675 aa3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 DRC7Q8IY82 874 aa3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 CARFQ8N187 725 aa3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 PQLC1Q8N2U9 271 aa3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 PLA2G15Q8NCC3 412 aa3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 CCHCR1Q8TD31 782 aa3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 HOXB13Q92826 284 aaPredicted RBP3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 TTC17Q96AE7 1141 aa3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 AJUBAQ96IF1 538 aa3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 UHRF1Q96T88 793 aaPredicted RBP3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 SLC38A3Q99624 504 aa3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 CGRRF1Q99675 332 aa3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 LDAHQ9H6V9 325 aa3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 KMT5AQ9NQR1 393 aa3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 TDP1Q9NUW8 608 aa3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 CTDP1Q9Y5B0 961 aaPredicted RBP3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 CUX2O14529 1486 aa3.97□□□□□ -1.77
CALCOCO2-216ENST00000509784 LRRC14BA6NHZ5 514 aa3.96□□□□□ -1.78
CALCOCO2-216ENST00000509784 APAF1O14727 1248 aa3.96□□□□□ -1.78
CALCOCO2-216ENST00000509784 B3GALT2O43825 422 aa3.96□□□□□ -1.78
CALCOCO2-216ENST00000509784 ENDOD1O94919 500 aa3.96□□□□□ -1.78
CALCOCO2-216ENST00000509784 RHCEP18577 417 aa3.96□□□□□ -1.78
CALCOCO2-216ENST00000509784 HTR1BP28222 390 aa3.96□□□□□ -1.78
CALCOCO2-216ENST00000509784 CSF2RBP32927 897 aa3.96□□□□□ -1.78
CALCOCO2-216ENST00000509784 KIR2DL3P43628 341 aa3.96□□□□□ -1.78
CALCOCO2-216ENST00000509784 AFF3P51826 1226 aaKnown RBP3.96□□□□□ -1.78
CALCOCO2-216ENST00000509784 NEK3P51956 506 aa3.96□□□□□ -1.78
CALCOCO2-216ENST00000509784 MAP2K6P52564 334 aa3.96□□□□□ -1.78
CALCOCO2-216ENST00000509784 LINC00310P59036 64 aa3.96□□□□□ -1.78
CALCOCO2-216ENST00000509784 ATP2C1P98194 919 aaPredicted RBP3.96□□□□□ -1.78
CALCOCO2-216ENST00000509784 RHDQ02161 417 aa3.96□□□□□ -1.78
CALCOCO2-216ENST00000509784 SAFBQ15424 915 aaKnown RBP eCLIP3.96□□□□□ -1.78
CALCOCO2-216ENST00000509784 MST1LQ2TV78 715 aa3.96□□□□□ -1.78
CALCOCO2-216ENST00000509784 ZNF648Q5T619 568 aaPredicted RBP3.96□□□□□ -1.78
CALCOCO2-216ENST00000509784 AGBL4Q5VU57 503 aa3.96□□□□□ -1.78
CALCOCO2-216ENST00000509784 IL31Q6EBC2 164 aa3.96□□□□□ -1.78
CALCOCO2-216ENST00000509784 NPNTQ6UXI9 565 aa3.96□□□□□ -1.78
CALCOCO2-216ENST00000509784 USP30Q70CQ3 517 aa3.96□□□□□ -1.78
CALCOCO2-216ENST00000509784 SRGAP1Q7Z6B7 1085 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms