RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 PDCD2LQ9BRP1 358 aa4.57□□□□□ -1.68
PHC3-216ENST00000497171 CELF4Q9BZC1 486 aaKnown RBP4.57□□□□□ -1.68
PHC3-216ENST00000497171 ZNF768Q9H5H4 540 aaKnown RBP4.57□□□□□ -1.68
PHC3-216ENST00000497171 PCDH12Q9NPG4 1184 aa4.57□□□□□ -1.68
PHC3-216ENST00000497171 DNAI1Q9UI46 699 aa4.57□□□□□ -1.68
PHC3-216ENST00000497171 FRMD4BQ9Y2L6 1034 aa4.57□□□□□ -1.68
PHC3-216ENST00000497171 A0A087X0B3 334 aa4.56□□□□□ -1.68
PHC3-216ENST00000497171 TCRBV16S1A1N1A0A5B0 115 aa4.56□□□□□ -1.68
PHC3-216ENST00000497171 PRLP01236 227 aa4.56□□□□□ -1.68
PHC3-216ENST00000497171 HLA-DOAP06340 250 aa4.56□□□□□ -1.68
PHC3-216ENST00000497171 TYRP1P17643 537 aa4.56□□□□□ -1.68
PHC3-216ENST00000497171 SOX5P35711 763 aa4.56□□□□□ -1.68
PHC3-216ENST00000497171 FNTBP49356 437 aa4.56□□□□□ -1.68
PHC3-216ENST00000497171 RGS3P49796 1198 aa4.56□□□□□ -1.68
PHC3-216ENST00000497171 SEC24CP53992 1094 aa4.56□□□□□ -1.68
PHC3-216ENST00000497171 ANTXR2P58335 489 aa4.56□□□□□ -1.68
PHC3-216ENST00000497171 GUCY1B3Q02153 619 aa4.56□□□□□ -1.68
PHC3-216ENST00000497171 MAN2A1Q16706 1144 aa4.56□□□□□ -1.68
PHC3-216ENST00000497171 PIK3R6Q5UE93 754 aa4.56□□□□□ -1.68
PHC3-216ENST00000497171 CC2D1AQ6P1N0 951 aaPredicted RBP4.56□□□□□ -1.68
PHC3-216ENST00000497171 FAM83AQ86UY5 434 aa4.56□□□□□ -1.68
PHC3-216ENST00000497171 THNSL2Q86YJ6 484 aa4.56□□□□□ -1.68
PHC3-216ENST00000497171 PLXDC1Q8IUK5 500 aa4.56□□□□□ -1.68
PHC3-216ENST00000497171 PPM1KQ8N3J5 372 aa4.56□□□□□ -1.68
PHC3-216ENST00000497171 C2orf69Q8N8R5 385 aa4.56□□□□□ -1.68
PHC3-216ENST00000497171 UIMC1Q96RL1 719 aa4.56□□□□□ -1.68
PHC3-216ENST00000497171 NDC1Q9BTX1 674 aa4.56□□□□□ -1.68
PHC3-216ENST00000497171 BRIP1Q9BX63 1249 aa4.56□□□□□ -1.68
PHC3-216ENST00000497171 SLC29A3Q9BZD2 475 aa4.56□□□□□ -1.68
PHC3-216ENST00000497171 TMX1Q9H3N1 280 aa4.56□□□□□ -1.68
PHC3-216ENST00000497171 CAAP1Q9H8G2 361 aa4.56□□□□□ -1.68
PHC3-216ENST00000497171 AKIP1Q9NQ31 210 aa4.56□□□□□ -1.68
PHC3-216ENST00000497171 INTS7Q9NVH2 962 aaKnown RBP4.56□□□□□ -1.68
PHC3-216ENST00000497171 RNF7Q9UBF6 113 aa4.56□□□□□ -1.68
PHC3-216ENST00000497171 TLK1Q9UKI8 766 aa4.56□□□□□ -1.68
PHC3-216ENST00000497171 NOP58Q9Y2X3 529 aaKnown RBP4.56□□□□□ -1.68
PHC3-216ENST00000497171 COQ6Q9Y2Z9 468 aa4.56□□□□□ -1.68
PHC3-216ENST00000497171 UBA6A0AVT1 1052 aaPredicted RBP4.55□□□□□ -1.68
PHC3-216ENST00000497171 KCNQ2O43526 872 aa4.55□□□□□ -1.68
PHC3-216ENST00000497171 NDUFA10O95299 355 aa4.55□□□□□ -1.68
PHC3-216ENST00000497171 ZFP36P26651 326 aaKnown RBP4.55□□□□□ -1.68
PHC3-216ENST00000497171 BCAR1P56945 870 aa4.55□□□□□ -1.68
PHC3-216ENST00000497171 MAPK7Q13164 816 aa4.55□□□□□ -1.68
PHC3-216ENST00000497171 PCBP1Q15365 356 aaKnown RBP eCLIP4.55□□□□□ -1.68
PHC3-216ENST00000497171 VPS72Q15906 364 aa4.55□□□□□ -1.68
PHC3-216ENST00000497171 TTC38Q5R3I4 469 aa4.55□□□□□ -1.68
PHC3-216ENST00000497171 CDCA2Q69YH5 1023 aaPredicted RBP4.55□□□□□ -1.68
PHC3-216ENST00000497171 DDX53Q86TM3 631 aaKnown RBP4.55□□□□□ -1.68
PHC3-216ENST00000497171 AHI1Q8N157 1196 aa4.55□□□□□ -1.68
PHC3-216ENST00000497171 SIMC1Q8NDZ2 872 aa4.55□□□□□ -1.68
PHC3-216ENST00000497171 SCARB1Q8WTV0 552 aa4.55□□□□□ -1.68
PHC3-216ENST00000497171 FOXRED1Q96CU9 486 aaPredicted RBP4.55□□□□□ -1.68
PHC3-216ENST00000497171 MAML3Q96JK9 1138 aa4.55□□□□□ -1.68
PHC3-216ENST00000497171 LRFN3Q9BTN0 628 aa4.55□□□□□ -1.68
PHC3-216ENST00000497171 DUSP26Q9BV47 211 aa4.55□□□□□ -1.68
PHC3-216ENST00000497171 PRDM13Q9H4Q3 707 aa4.55□□□□□ -1.68
PHC3-216ENST00000497171 SYBUQ9NX95 663 aa4.55□□□□□ -1.68
PHC3-216ENST00000497171 SAMD15Q9P1V8 674 aa4.55□□□□□ -1.68
PHC3-216ENST00000497171 CLCA2Q9UQC9 943 aa4.55□□□□□ -1.68
PHC3-216ENST00000497171 EPN1Q9Y6I3 576 aaPredicted RBP4.55□□□□□ -1.68
PHC3-216ENST00000497171 GSG1L2A8MUP6 293 aa4.54□□□□□ -1.68
PHC3-216ENST00000497171 AHRRA9YTQ3 701 aa4.54□□□□□ -1.68
PHC3-216ENST00000497171 B4E1Z4 1266 aa4.54□□□□□ -1.68
PHC3-216ENST00000497171 HOXA3O43365 443 aaPredicted RBP4.54□□□□□ -1.68
PHC3-216ENST00000497171 NCR1O76036 304 aa4.54□□□□□ -1.68
PHC3-216ENST00000497171 STC2O76061 302 aa4.54□□□□□ -1.68
PHC3-216ENST00000497171 FSBPO95073 299 aa4.54□□□□□ -1.68
PHC3-216ENST00000497171 SPATA31D3P0C874 917 aa4.54□□□□□ -1.68
PHC3-216ENST00000497171 APOBEC3AP31941 199 aaPredicted RBP4.54□□□□□ -1.68
PHC3-216ENST00000497171 BMPR1AP36894 532 aa4.54□□□□□ -1.68
PHC3-216ENST00000497171 AMPD3Q01432 767 aa4.54□□□□□ -1.68
PHC3-216ENST00000497171 STRN3Q13033 797 aa4.54□□□□□ -1.68
PHC3-216ENST00000497171 SART3Q15020 963 aaKnown RBP4.54□□□□□ -1.68
PHC3-216ENST00000497171 FAM214AQ32MH5 1076 aa4.54□□□□□ -1.68
PHC3-216ENST00000497171 PRAMEF9Q5VWM5 478 aa4.54□□□□□ -1.68
PHC3-216ENST00000497171 FSTL4Q6MZW2 842 aa4.54□□□□□ -1.68
PHC3-216ENST00000497171 ZCCHC8Q6NZY4 707 aaKnown RBP4.54□□□□□ -1.68
PHC3-216ENST00000497171 SPATA31D4Q6ZUB0 917 aa4.54□□□□□ -1.68
PHC3-216ENST00000497171 DDX46Q7L014 1031 aaKnown RBP4.54□□□□□ -1.68
PHC3-216ENST00000497171 KRT26Q7Z3Y9 468 aa4.54□□□□□ -1.68
PHC3-216ENST00000497171 IGSF22Q8N9C0 903 aa4.54□□□□□ -1.68
PHC3-216ENST00000497171 ATL2Q8NHH9 583 aa4.54□□□□□ -1.68
PHC3-216ENST00000497171 LINC00476Q8WZB0 136 aa4.54□□□□□ -1.68
PHC3-216ENST00000497171 BOCQ9BWV1 1114 aa4.54□□□□□ -1.68
PHC3-216ENST00000497171 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.54□□□□□ -1.68
PHC3-216ENST00000497171 KIAA1586Q9HCI6 787 aa4.54□□□□□ -1.68
PHC3-216ENST00000497171 MAPRE3Q9UPY8 281 aa4.54□□□□□ -1.68
PHC3-216ENST00000497171 DIRC3C9JPN6 131 aa4.53□□□□□ -1.68
PHC3-216ENST00000497171 M0R2C6 588 aa4.53□□□□□ -1.68
PHC3-216ENST00000497171 NPTXRO95502 500 aa4.53□□□□□ -1.68
PHC3-216ENST00000497171 HNRNPLP14866 589 aaKnown RBP eCLIP4.53□□□□□ -1.68
PHC3-216ENST00000497171 MPP3Q13368 585 aa4.53□□□□□ -1.68
PHC3-216ENST00000497171 ABHD17BQ5VST6 288 aa4.53□□□□□ -1.68
PHC3-216ENST00000497171 ABHD17CQ6PCB6 329 aa4.53□□□□□ -1.68
PHC3-216ENST00000497171 RNF180Q86T96 592 aa4.53□□□□□ -1.68
PHC3-216ENST00000497171 NME9Q86XW9 330 aa4.53□□□□□ -1.68
PHC3-216ENST00000497171 OR52N2Q8NGI0 321 aa4.53□□□□□ -1.68
PHC3-216ENST00000497171 OR5M3Q8NGP4 307 aa4.53□□□□□ -1.68
PHC3-216ENST00000497171 TUBGCP5Q96RT8 1024 aa4.53□□□□□ -1.68
PHC3-216ENST00000497171 FAM126AQ9BYI3 521 aaPredicted RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms