RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 SCNN1GP51170 649 aa15.51■□□□□ 0.07
VTI1A-206ENST00000489142 NCBP1Q09161 790 aaKnown RBP15.51■□□□□ 0.07
VTI1A-206ENST00000489142 PDIA5Q14554 519 aa15.51■□□□□ 0.07
VTI1A-206ENST00000489142 SMC1AQ14683 1233 aaKnown RBP15.51■□□□□ 0.07
VTI1A-206ENST00000489142 TMEM132AQ24JP5 1023 aa15.51■□□□□ 0.07
VTI1A-206ENST00000489142 LARP1BQ659C4 914 aaKnown RBP15.51■□□□□ 0.07
VTI1A-206ENST00000489142 CDCA2Q69YH5 1023 aaPredicted RBP15.51■□□□□ 0.07
VTI1A-206ENST00000489142 DTHD1Q6ZMT9 781 aa15.51■□□□□ 0.07
VTI1A-206ENST00000489142 KCNK18Q7Z418 384 aa15.51■□□□□ 0.07
VTI1A-206ENST00000489142 SMRP1Q8NCR6 262 aa15.51■□□□□ 0.07
VTI1A-206ENST00000489142 CCDC51Q96ER9 411 aa15.51■□□□□ 0.07
VTI1A-206ENST00000489142 PLIN2Q99541 437 aa15.51■□□□□ 0.07
VTI1A-206ENST00000489142 MMTAG2Q9BU76 263 aaKnown RBP15.51■□□□□ 0.07
VTI1A-206ENST00000489142 RAB34Q9BZG1 259 aa15.51■□□□□ 0.07
VTI1A-206ENST00000489142 ZBP1Q9H171 429 aa15.51■□□□□ 0.07
VTI1A-206ENST00000489142 NGRNQ9NPE2 291 aaKnown RBP15.51■□□□□ 0.07
VTI1A-206ENST00000489142 MIOSQ9NXC5 875 aa15.51■□□□□ 0.07
VTI1A-206ENST00000489142 KLK14Q9P0G3 267 aa15.51■□□□□ 0.07
VTI1A-206ENST00000489142 RAPGEFL1Q9UHV5 662 aa15.51■□□□□ 0.07
VTI1A-206ENST00000489142 CDH22Q9UJ99 828 aa15.51■□□□□ 0.07
VTI1A-206ENST00000489142 USP15Q9Y4E8 981 aaPredicted RBP15.51■□□□□ 0.07
VTI1A-206ENST00000489142 MYH11P35749 1972 aa15.5■□□□□ 0.07
VTI1A-206ENST00000489142 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.5■□□□□ 0.07
VTI1A-206ENST00000489142 VWA3AA6NCI4 1184 aa15.5■□□□□ 0.07
VTI1A-206ENST00000489142 F8W810 466 aa15.5■□□□□ 0.07
VTI1A-206ENST00000489142 EYA4O95677 639 aa15.5■□□□□ 0.07
VTI1A-206ENST00000489142 CXCL14O95715 111 aa15.5■□□□□ 0.07
VTI1A-206ENST00000489142 ATP2C1P98194 919 aaPredicted RBP15.5■□□□□ 0.07
VTI1A-206ENST00000489142 COASYQ13057 564 aa15.5■□□□□ 0.07
VTI1A-206ENST00000489142 PCBP1Q15365 356 aaKnown RBP eCLIP15.5■□□□□ 0.07
VTI1A-206ENST00000489142 RILPL1Q5EBL4 403 aa15.5■□□□□ 0.07
VTI1A-206ENST00000489142 KRT79Q5XKE5 535 aa15.5■□□□□ 0.07
VTI1A-206ENST00000489142 SLC27A1Q6PCB7 646 aa15.5■□□□□ 0.07
VTI1A-206ENST00000489142 DDX53Q86TM3 631 aaKnown RBP15.5■□□□□ 0.07
VTI1A-206ENST00000489142 ZBTB8OSQ8IWT0 167 aa15.5■□□□□ 0.07
VTI1A-206ENST00000489142 ADHFE1Q8IWW8 467 aa15.5■□□□□ 0.07
VTI1A-206ENST00000489142 MRPL43Q8N983 215 aaKnown RBP15.5■□□□□ 0.07
VTI1A-206ENST00000489142 CNNM3Q8NE01 707 aa15.5■□□□□ 0.07
VTI1A-206ENST00000489142 DEPTORQ8TB45 409 aa15.5■□□□□ 0.07
VTI1A-206ENST00000489142 CDCA3Q99618 268 aaPredicted RBP15.5■□□□□ 0.07
VTI1A-206ENST00000489142 RUSC1Q9BVN2 902 aa15.5■□□□□ 0.07
VTI1A-206ENST00000489142 CACNG4Q9UBN1 327 aa15.5■□□□□ 0.07
VTI1A-206ENST00000489142 PRG3Q9Y2Y8 225 aaPredicted RBP15.5■□□□□ 0.07
VTI1A-206ENST00000489142 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.5■□□□□ 0.07
VTI1A-206ENST00000489142 A0A1B0GUA9 196 aa15.49■□□□□ 0.07
VTI1A-206ENST00000489142 LAD1O00515 517 aa15.49■□□□□ 0.07
VTI1A-206ENST00000489142 NRP1O14786 923 aa15.49■□□□□ 0.07
VTI1A-206ENST00000489142 CLASP2O75122 1294 aaKnown RBP15.49■□□□□ 0.07
VTI1A-206ENST00000489142 PRKCBP05771 671 aa15.49■□□□□ 0.07
VTI1A-206ENST00000489142 MUTP22033 750 aa15.49■□□□□ 0.07
VTI1A-206ENST00000489142 PRPHP41219 470 aa15.49■□□□□ 0.07
VTI1A-206ENST00000489142 KCNC3Q14003 757 aa15.49■□□□□ 0.07
VTI1A-206ENST00000489142 RABGGTAQ92696 567 aa15.49■□□□□ 0.07
VTI1A-206ENST00000489142 CCDC113Q9H0I3 377 aa15.49■□□□□ 0.07
VTI1A-206ENST00000489142 FZD8Q9H461 694 aa15.49■□□□□ 0.07
VTI1A-206ENST00000489142 PDZD7Q9H5P4 517 aa15.49■□□□□ 0.07
VTI1A-206ENST00000489142 FOXD4L1Q9NU39 408 aa15.49■□□□□ 0.07
VTI1A-206ENST00000489142 PRMT7Q9NVM4 692 aaPredicted RBP15.49■□□□□ 0.07
VTI1A-206ENST00000489142 MARCH5Q9NX47 278 aa15.49■□□□□ 0.07
VTI1A-206ENST00000489142 PARP2Q9UGN5 583 aa15.49■□□□□ 0.07
VTI1A-206ENST00000489142 FAN1Q9Y2M0 1017 aa15.49■□□□□ 0.07
VTI1A-206ENST00000489142 TRIP11Q15643 1979 aa15.48■□□□□ 0.07
VTI1A-206ENST00000489142 VPS37CA5D8V6 355 aaPredicted RBP15.48■□□□□ 0.07
VTI1A-206ENST00000489142 CTSAP10619 480 aa15.48■□□□□ 0.07
VTI1A-206ENST00000489142 SP100P23497 879 aaPredicted RBP15.48■□□□□ 0.07
VTI1A-206ENST00000489142 NAMPTP43490 491 aa15.48■□□□□ 0.07
VTI1A-206ENST00000489142 OR1G1P47890 313 aa15.48■□□□□ 0.07
VTI1A-206ENST00000489142 RAD51AP2Q09MP3 1159 aa15.48■□□□□ 0.07
VTI1A-206ENST00000489142 PRPF4BQ13523 1007 aaKnown RBP15.48■□□□□ 0.07
VTI1A-206ENST00000489142 MAPK6Q16659 721 aa15.48■□□□□ 0.07
VTI1A-206ENST00000489142 EEF1DP3Q658K8 133 aa15.48■□□□□ 0.07
VTI1A-206ENST00000489142 ANKRD54Q6NXT1 300 aa15.48■□□□□ 0.07
VTI1A-206ENST00000489142 SYCE2Q6PIF2 218 aa15.48■□□□□ 0.07
VTI1A-206ENST00000489142 PPP4R3CPQ6ZMV5 832 aa15.48■□□□□ 0.07
VTI1A-206ENST00000489142 COLGALT2Q8IYK4 626 aa15.48■□□□□ 0.07
VTI1A-206ENST00000489142 RSPH1Q8WYR4 309 aa15.48■□□□□ 0.07
VTI1A-206ENST00000489142 IFT74Q96LB3 600 aa15.48■□□□□ 0.07
VTI1A-206ENST00000489142 PNMA5Q96PV4 448 aa15.48■□□□□ 0.07
VTI1A-206ENST00000489142 BACH2Q9BYV9 841 aa15.48■□□□□ 0.07
VTI1A-206ENST00000489142 C2orf40Q9H1Z8 148 aa15.48■□□□□ 0.07
VTI1A-206ENST00000489142 CXCL16Q9H2A7 254 aa15.48■□□□□ 0.07
VTI1A-206ENST00000489142 UBN1Q9NPG3 1134 aa15.48■□□□□ 0.07
VTI1A-206ENST00000489142 KANSL3Q9P2N6 904 aa15.48■□□□□ 0.07
VTI1A-206ENST00000489142 PRKAG3Q9UGI9 489 aa15.48■□□□□ 0.07
VTI1A-206ENST00000489142 DNM3Q9UQ16 869 aa15.48■□□□□ 0.07
VTI1A-206ENST00000489142 HCFC2Q9Y5Z7 792 aa15.48■□□□□ 0.07
VTI1A-206ENST00000489142 PLXNA3P51805 1871 aa15.48■□□□□ 0.07
VTI1A-206ENST00000489142 C19orf67A6NJJ6 358 aa15.47■□□□□ 0.07
VTI1A-206ENST00000489142 CCDC169A6NNP5 214 aa15.47■□□□□ 0.07
VTI1A-206ENST00000489142 C2CD2LO14523 706 aa15.47■□□□□ 0.07
VTI1A-206ENST00000489142 HIP1RO75146 1068 aa15.47■□□□□ 0.07
VTI1A-206ENST00000489142 ALDH2P05091 517 aa15.47■□□□□ 0.07
VTI1A-206ENST00000489142 SRGAP2BP0DMP2 458 aa15.47■□□□□ 0.07
VTI1A-206ENST00000489142 PEX3P56589 373 aa15.47■□□□□ 0.07
VTI1A-206ENST00000489142 PPP2R5AQ15172 486 aa15.47■□□□□ 0.07
VTI1A-206ENST00000489142 PTPN14Q15678 1187 aa15.47■□□□□ 0.07
VTI1A-206ENST00000489142 FAM187BQ17R55 369 aa15.47■□□□□ 0.07
VTI1A-206ENST00000489142 KANK3Q6NY19 840 aa15.47■□□□□ 0.07
VTI1A-206ENST00000489142 TAS1R1Q7RTX1 841 aa15.47■□□□□ 0.07
VTI1A-206ENST00000489142 HACE1Q8IYU2 909 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 314.8 ms