RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 DRC1Q96MC2 740 aa8.27□□□□□ -1.09
CPNE1-226ENST00000486021 LRFN3Q9BTN0 628 aa8.27□□□□□ -1.09
CPNE1-226ENST00000486021 POLR3FQ9H1D9 316 aaPredicted RBP8.27□□□□□ -1.09
CPNE1-226ENST00000486021 NRDE2Q9H7Z3 1164 aa8.27□□□□□ -1.09
CPNE1-226ENST00000486021 TOPORSQ9NS56 1045 aaPredicted RBP8.27□□□□□ -1.09
CPNE1-226ENST00000486021 KCND2Q9NZV8 630 aa8.27□□□□□ -1.09
CPNE1-226ENST00000486021 PARP2Q9UGN5 583 aa8.27□□□□□ -1.09
CPNE1-226ENST00000486021 RBM19Q9Y4C8 960 aaKnown RBP8.27□□□□□ -1.09
CPNE1-226ENST00000486021 TRIP11Q15643 1979 aa8.27□□□□□ -1.09
CPNE1-226ENST00000486021 CHD9Q3L8U1 2897 aa8.27□□□□□ -1.09
CPNE1-226ENST00000486021 TMEM150BA6NC51 233 aa8.26□□□□□ -1.09
CPNE1-226ENST00000486021 C2orf71A6NGG8 1288 aa8.26□□□□□ -1.09
CPNE1-226ENST00000486021 POTEMA6NI47 508 aa8.26□□□□□ -1.09
CPNE1-226ENST00000486021 K7ERI5 159 aa8.26□□□□□ -1.09
CPNE1-226ENST00000486021 PER2O15055 1255 aa8.26□□□□□ -1.09
CPNE1-226ENST00000486021 TRAPPC3O43617 180 aa8.26□□□□□ -1.09
CPNE1-226ENST00000486021 JAK2O60674 1132 aa8.26□□□□□ -1.09
CPNE1-226ENST00000486021 CSDE1O75534 798 aaKnown RBP8.26□□□□□ -1.09
CPNE1-226ENST00000486021 LARGE1O95461 756 aa8.26□□□□□ -1.09
CPNE1-226ENST00000486021 SOD2P04179 222 aa8.26□□□□□ -1.09
CPNE1-226ENST00000486021 PDIA4P13667 645 aaKnown RBP8.26□□□□□ -1.09
CPNE1-226ENST00000486021 CYP11B2P19099 503 aa8.26□□□□□ -1.09
CPNE1-226ENST00000486021 DNAJB1P25685 340 aa8.26□□□□□ -1.09
CPNE1-226ENST00000486021 U2AF2P26368 475 aaKnown RBP eCLIP8.26□□□□□ -1.09
CPNE1-226ENST00000486021 OR1G1P47890 313 aa8.26□□□□□ -1.09
CPNE1-226ENST00000486021 GUCY1B3Q02153 619 aa8.26□□□□□ -1.09
CPNE1-226ENST00000486021 DMP1Q13316 513 aaPredicted RBP8.26□□□□□ -1.09
CPNE1-226ENST00000486021 PRPF4BQ13523 1007 aaKnown RBP8.26□□□□□ -1.09
CPNE1-226ENST00000486021 ARL6IP4Q66PJ3 421 aaKnown RBP8.26□□□□□ -1.09
CPNE1-226ENST00000486021 PADI6Q6TGC4 694 aa8.26□□□□□ -1.09
CPNE1-226ENST00000486021 PPP4R3CPQ6ZMV5 832 aa8.26□□□□□ -1.09
CPNE1-226ENST00000486021 LRRC55Q6ZSA7 311 aa8.26□□□□□ -1.09
CPNE1-226ENST00000486021 RNF135Q8IUD6 432 aa8.26□□□□□ -1.09
CPNE1-226ENST00000486021 PIGOQ8TEQ8 1089 aa8.26□□□□□ -1.09
CPNE1-226ENST00000486021 CALML4Q96GE6 196 aa8.26□□□□□ -1.09
CPNE1-226ENST00000486021 ZBP1Q9H171 429 aa8.26□□□□□ -1.09
CPNE1-226ENST00000486021 ADAM7Q9H2U9 754 aa8.26□□□□□ -1.09
CPNE1-226ENST00000486021 EPHX3Q9H6B9 360 aa8.26□□□□□ -1.09
CPNE1-226ENST00000486021 SFXN1Q9H9B4 322 aa8.26□□□□□ -1.09
CPNE1-226ENST00000486021 BMP2KQ9NSY1 1161 aaPredicted RBP8.26□□□□□ -1.09
CPNE1-226ENST00000486021 GJB4Q9NTQ9 266 aa8.26□□□□□ -1.09
CPNE1-226ENST00000486021 BARX2Q9UMQ3 279 aaPredicted RBP8.26□□□□□ -1.09
CPNE1-226ENST00000486021 SMC3Q9UQE7 1217 aa8.26□□□□□ -1.09
CPNE1-226ENST00000486021 USTQ9Y2C2 406 aa8.26□□□□□ -1.09
CPNE1-226ENST00000486021 USP15Q9Y4E8 981 aaPredicted RBP8.26□□□□□ -1.09
CPNE1-226ENST00000486021 IPPQ9Y573 584 aa8.26□□□□□ -1.09
CPNE1-226ENST00000486021 CHD7Q9P2D1 2997 aa8.26□□□□□ -1.09
CPNE1-226ENST00000486021 PRUNE2Q8WUY3 3088 aa8.25□□□□□ -1.09
CPNE1-226ENST00000486021 A0A1B0GUA9 196 aa8.25□□□□□ -1.09
CPNE1-226ENST00000486021 ARL5CA6NH57 179 aa8.25□□□□□ -1.09
CPNE1-226ENST00000486021 LOC730098B7Z3J9 87 aa8.25□□□□□ -1.09
CPNE1-226ENST00000486021 NT5C1B-RDH14C9J2C7 533 aa8.25□□□□□ -1.09
CPNE1-226ENST00000486021 NRP1O14786 923 aa8.25□□□□□ -1.09
CPNE1-226ENST00000486021 INPPL1O15357 1258 aa8.25□□□□□ -1.09
CPNE1-226ENST00000486021 LINC01565O15544 149 aa8.25□□□□□ -1.09
CPNE1-226ENST00000486021 TSPAN1O60635 241 aa8.25□□□□□ -1.09
CPNE1-226ENST00000486021 TADA2AO75478 443 aa8.25□□□□□ -1.09
CPNE1-226ENST00000486021 POMCP01189 267 aa8.25□□□□□ -1.09
CPNE1-226ENST00000486021 PRKCBP05771 671 aa8.25□□□□□ -1.09
CPNE1-226ENST00000486021 THP07101 528 aa8.25□□□□□ -1.09
CPNE1-226ENST00000486021 ARF4P18085 180 aaPredicted RBP8.25□□□□□ -1.09
CPNE1-226ENST00000486021 GLUD2P49448 558 aa8.25□□□□□ -1.09
CPNE1-226ENST00000486021 NUBP1P53384 320 aa8.25□□□□□ -1.09
CPNE1-226ENST00000486021 MBTD1Q05BQ5 628 aa8.25□□□□□ -1.09
CPNE1-226ENST00000486021 STRN3Q13033 797 aa8.25□□□□□ -1.09
CPNE1-226ENST00000486021 PTGDRQ13258 359 aa8.25□□□□□ -1.09
CPNE1-226ENST00000486021 CAPSQ13938 189 aa8.25□□□□□ -1.09
CPNE1-226ENST00000486021 KYAT1Q16773 422 aa8.25□□□□□ -1.09
CPNE1-226ENST00000486021 USP41Q3LFD5 358 aa8.25□□□□□ -1.09
CPNE1-226ENST00000486021 EARS2Q5JPH6 523 aaKnown RBP8.25□□□□□ -1.09
CPNE1-226ENST00000486021 LLGL2Q6P1M3 1020 aa8.25□□□□□ -1.09
CPNE1-226ENST00000486021 AGMOQ6ZNB7 445 aa8.25□□□□□ -1.09
CPNE1-226ENST00000486021 C15orf39Q6ZRI6 1047 aa8.25□□□□□ -1.09
CPNE1-226ENST00000486021 RTL10Q7L3V2 364 aa8.25□□□□□ -1.09
CPNE1-226ENST00000486021 BMP8AQ7Z5Y6 402 aa8.25□□□□□ -1.09
CPNE1-226ENST00000486021 UBALD2Q8IYN6 164 aa8.25□□□□□ -1.09
CPNE1-226ENST00000486021 SNX29Q8TEQ0 813 aa8.25□□□□□ -1.09
CPNE1-226ENST00000486021 EDAQ92838 391 aa8.25□□□□□ -1.09
CPNE1-226ENST00000486021 LPPQ93052 612 aa8.25□□□□□ -1.09
CPNE1-226ENST00000486021 RPGRIP1Q96KN7 1286 aa8.25□□□□□ -1.09
CPNE1-226ENST00000486021 AK8Q96MA6 479 aa8.25□□□□□ -1.09
CPNE1-226ENST00000486021 UROC1Q96N76 676 aa8.25□□□□□ -1.09
CPNE1-226ENST00000486021 PLEKHA4Q9H4M7 779 aa8.25□□□□□ -1.09
CPNE1-226ENST00000486021 RNF19AQ9NV58 838 aa8.25□□□□□ -1.09
CPNE1-226ENST00000486021 SLC38A7Q9NVC3 462 aa8.25□□□□□ -1.09
CPNE1-226ENST00000486021 CLEC1BQ9P126 229 aa8.25□□□□□ -1.09
CPNE1-226ENST00000486021 LARSQ9P2J5 1176 aaKnown RBP8.25□□□□□ -1.09
CPNE1-226ENST00000486021 WRAP73Q9P2S5 460 aaPredicted RBP8.25□□□□□ -1.09
CPNE1-226ENST00000486021 HCFC2Q9Y5Z7 792 aa8.25□□□□□ -1.09
CPNE1-226ENST00000486021 PDCD11Q14690 1871 aaKnown RBP8.24□□□□□ -1.09
CPNE1-226ENST00000486021 CCDC169A6NNP5 214 aa8.24□□□□□ -1.09
CPNE1-226ENST00000486021 ACKR2O00590 384 aa8.24□□□□□ -1.09
CPNE1-226ENST00000486021 XPOTO43592 962 aaKnown RBP8.24□□□□□ -1.09
CPNE1-226ENST00000486021 CLASP2O75122 1294 aaKnown RBP8.24□□□□□ -1.09
CPNE1-226ENST00000486021 NPTXRO95502 500 aa8.24□□□□□ -1.09
CPNE1-226ENST00000486021 GLP2RO95838 553 aa8.24□□□□□ -1.09
CPNE1-226ENST00000486021 GLUD1P00367 558 aa8.24□□□□□ -1.09
CPNE1-226ENST00000486021 GLRA2P23416 452 aa8.24□□□□□ -1.09
CPNE1-226ENST00000486021 HOXA11P31270 313 aaPredicted RBP8.24□□□□□ -1.09
CPNE1-226ENST00000486021 GTF2F1P35269 517 aaKnown RBP eCLIP8.24□□□□□ -1.091e-9■■■■□ 19.4
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms