RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 PRKAG2Q9UGJ0 569 aa16.03■□□□□ 0.16
SHANK2-210ENST00000449116 PADI3Q9ULW8 664 aa16.03■□□□□ 0.16
SHANK2-210ENST00000449116 TNFSF13BQ9Y275 285 aa16.03■□□□□ 0.16
SHANK2-210ENST00000449116 TANC1Q9C0D5 1861 aa16.02■□□□□ 0.16
SHANK2-210ENST00000449116 A0A1B0GUA9 196 aa16.02■□□□□ 0.16
SHANK2-210ENST00000449116 TISP43B9A030 160 aa16.02■□□□□ 0.16
SHANK2-210ENST00000449116 ANKRD63C9JTQ0 380 aa16.02■□□□□ 0.16
SHANK2-210ENST00000449116 NBNO60934 754 aa16.02■□□□□ 0.16
SHANK2-210ENST00000449116 TOM1L1O75674 476 aa16.02■□□□□ 0.16
SHANK2-210ENST00000449116 RAG1P15918 1043 aa16.02■□□□□ 0.16
SHANK2-210ENST00000449116 PROZP22891 400 aa16.02■□□□□ 0.16
SHANK2-210ENST00000449116 HOXA11P31270 313 aaPredicted RBP16.02■□□□□ 0.16
SHANK2-210ENST00000449116 RFC2P35250 354 aa16.02■□□□□ 0.16
SHANK2-210ENST00000449116 ZNF165P49910 485 aa16.02■□□□□ 0.16
SHANK2-210ENST00000449116 NFIL3Q16649 462 aa16.02■□□□□ 0.16
SHANK2-210ENST00000449116 EDRF1Q3B7T1 1238 aa16.02■□□□□ 0.16
SHANK2-210ENST00000449116 ANKRD40Q6AI12 368 aa16.02■□□□□ 0.16
SHANK2-210ENST00000449116 SLFN12LQ6IEE8 588 aa16.02■□□□□ 0.16
SHANK2-210ENST00000449116 TTI2Q6NXR4 508 aa16.02■□□□□ 0.16
SHANK2-210ENST00000449116 NOTUMQ6P988 496 aa16.02■□□□□ 0.16
SHANK2-210ENST00000449116 C7orf61Q8IZ16 206 aa16.02■□□□□ 0.16
SHANK2-210ENST00000449116 SCLYQ96I15 445 aa16.02■□□□□ 0.16
SHANK2-210ENST00000449116 CPB2Q96IY4 423 aa16.02■□□□□ 0.16
SHANK2-210ENST00000449116 PDZD7Q9H5P4 517 aa16.02■□□□□ 0.16
SHANK2-210ENST00000449116 PTPRHQ9HD43 1115 aa16.02■□□□□ 0.16
SHANK2-210ENST00000449116 CHST12Q9NRB3 414 aa16.02■□□□□ 0.16
SHANK2-210ENST00000449116 PIN4Q9Y237 131 aaKnown RBP16.02■□□□□ 0.16
SHANK2-210ENST00000449116 STYXL1Q9Y6J8 313 aa16.02■□□□□ 0.16
SHANK2-210ENST00000449116 N4BP3O15049 544 aa16.01■□□□□ 0.15
SHANK2-210ENST00000449116 CLIC2O15247 247 aa16.01■□□□□ 0.15
SHANK2-210ENST00000449116 CLDN3O15551 220 aa16.01■□□□□ 0.15
SHANK2-210ENST00000449116 EVI5O60447 810 aa16.01■□□□□ 0.15
SHANK2-210ENST00000449116 CXCL10P02778 98 aa16.01■□□□□ 0.15
SHANK2-210ENST00000449116 NR3C1P04150 777 aa16.01■□□□□ 0.15
SHANK2-210ENST00000449116 GARTP22102 1010 aa16.01■□□□□ 0.15
SHANK2-210ENST00000449116 ADSSP30520 456 aa16.01■□□□□ 0.15
SHANK2-210ENST00000449116 GPNMBQ14956 572 aa16.01■□□□□ 0.15
SHANK2-210ENST00000449116 ARMCX5Q6P1M9 558 aa16.01■□□□□ 0.15
SHANK2-210ENST00000449116 MPZL3Q6UWV2 235 aa16.01■□□□□ 0.15
SHANK2-210ENST00000449116 FAM43BQ6ZT52 329 aaPredicted RBP16.01■□□□□ 0.15
SHANK2-210ENST00000449116 C12orf56Q8IXR9 622 aa16.01■□□□□ 0.15
SHANK2-210ENST00000449116 ENOX1Q8TC92 643 aaKnown RBP16.01■□□□□ 0.15
SHANK2-210ENST00000449116 FAM200AQ8TCP9 573 aa16.01■□□□□ 0.15
SHANK2-210ENST00000449116 TMEM174Q8WUU8 243 aa16.01■□□□□ 0.15
SHANK2-210ENST00000449116 POMGNT1Q8WZA1 660 aa16.01■□□□□ 0.15
SHANK2-210ENST00000449116 CCDC51Q96ER9 411 aa16.01■□□□□ 0.15
SHANK2-210ENST00000449116 MED15Q96RN5 788 aa16.01■□□□□ 0.15
SHANK2-210ENST00000449116 CBWD1Q9BRT8 395 aa16.01■□□□□ 0.15
SHANK2-210ENST00000449116 TCHPQ9BT92 498 aa16.01■□□□□ 0.15
SHANK2-210ENST00000449116 IFIH1Q9BYX4 1025 aaKnown RBP16.01■□□□□ 0.15
SHANK2-210ENST00000449116 ANKFY1Q9P2R3 1169 aa16.01■□□□□ 0.15
SHANK2-210ENST00000449116 ALPK3Q96L96 1907 aa16.01■□□□□ 0.15
SHANK2-210ENST00000449116 ABLIM1O14639 778 aa16■□□□□ 0.15
SHANK2-210ENST00000449116 ZSCAN20P17040 1043 aaPredicted RBP16■□□□□ 0.15
SHANK2-210ENST00000449116 NR2F2P24468 414 aa16■□□□□ 0.15
SHANK2-210ENST00000449116 ITGB8P26012 769 aa16■□□□□ 0.15
SHANK2-210ENST00000449116 RPL13P26373 211 aaKnown RBP16■□□□□ 0.15
SHANK2-210ENST00000449116 MATR3P43243 847 aaKnown RBP eCLIP16■□□□□ 0.153e-9■■■□□ 18.4
SHANK2-210ENST00000449116 FKBP3Q00688 224 aaKnown RBP16■□□□□ 0.15
SHANK2-210ENST00000449116 MYL5Q02045 173 aa16■□□□□ 0.15
SHANK2-210ENST00000449116 MCL1Q07820 350 aa16■□□□□ 0.15
SHANK2-210ENST00000449116 MYBPC2Q14324 1141 aa16■□□□□ 0.15
SHANK2-210ENST00000449116 NOLC1Q14978 699 aaKnown RBP eCLIP16■□□□□ 0.15
SHANK2-210ENST00000449116 ZNF568Q3ZCX4 644 aa16■□□□□ 0.15
SHANK2-210ENST00000449116 PLEKHG4Q58EX7 1191 aa16■□□□□ 0.15
SHANK2-210ENST00000449116 EEF1DP3Q658K8 133 aa16■□□□□ 0.15
SHANK2-210ENST00000449116 MFSD5Q6N075 450 aa16■□□□□ 0.15
SHANK2-210ENST00000449116 APBB1IPQ7Z5R6 666 aaPredicted RBP16■□□□□ 0.15
SHANK2-210ENST00000449116 CDR2LQ86X02 465 aaPredicted RBP16■□□□□ 0.15
SHANK2-210ENST00000449116 SLC9A9Q8IVB4 645 aa16■□□□□ 0.15
SHANK2-210ENST00000449116 TMEM199Q8N511 208 aa16■□□□□ 0.15
SHANK2-210ENST00000449116 APBB2Q92870 758 aa16■□□□□ 0.15
SHANK2-210ENST00000449116 ZBTB45Q96K62 511 aaPredicted RBP16■□□□□ 0.15
SHANK2-210ENST00000449116 ADPGKQ9BRR6 497 aa16■□□□□ 0.15
SHANK2-210ENST00000449116 MKI67P46013 3256 aaKnown RBP15.99■□□□□ 0.15
SHANK2-210ENST00000449116 A0A0B4J269 797 aa15.99■□□□□ 0.15
SHANK2-210ENST00000449116 SMTNL1A8MU46 457 aa15.99■□□□□ 0.15
SHANK2-210ENST00000449116 KIAA0391O15091 583 aaKnown RBP15.99■□□□□ 0.15
SHANK2-210ENST00000449116 MCF2P10911 925 aa15.99■□□□□ 0.15
SHANK2-210ENST00000449116 ADAM9Q13443 819 aa15.99■□□□□ 0.15
SHANK2-210ENST00000449116 TPD52L1Q16890 204 aaPredicted RBP15.99■□□□□ 0.15
SHANK2-210ENST00000449116 DCAF4L1Q3SXM0 396 aa15.99■□□□□ 0.15
SHANK2-210ENST00000449116 SPATA1Q5VX52 437 aa15.99■□□□□ 0.15
SHANK2-210ENST00000449116 SLC27A1Q6PCB7 646 aa15.99■□□□□ 0.15
SHANK2-210ENST00000449116 ZBTB33Q86T24 672 aa15.99■□□□□ 0.15
SHANK2-210ENST00000449116 DHX40Q8IX18 779 aaKnown RBP15.99■□□□□ 0.15
SHANK2-210ENST00000449116 ZC3H3Q8IXZ2 948 aaKnown RBP15.99■□□□□ 0.15
SHANK2-210ENST00000449116 CSGALNACT2Q8N6G5 542 aa15.99■□□□□ 0.15
SHANK2-210ENST00000449116 AOPEPQ8N6M6 819 aa15.99■□□□□ 0.15
SHANK2-210ENST00000449116 SEPT8Q92599 483 aa15.99■□□□□ 0.15
SHANK2-210ENST00000449116 DPF3Q92784 378 aa15.99■□□□□ 0.15
SHANK2-210ENST00000449116 DUSP9Q99956 384 aaKnown RBP15.99■□□□□ 0.15
SHANK2-210ENST00000449116 MSTO1Q9BUK6 570 aa15.99■□□□□ 0.15
SHANK2-210ENST00000449116 FTHL17Q9BXU8 183 aa15.99■□□□□ 0.15
SHANK2-210ENST00000449116 HAPLN2Q9GZV7 340 aa15.99■□□□□ 0.15
SHANK2-210ENST00000449116 CDT1Q9H211 546 aa15.99■□□□□ 0.15
SHANK2-210ENST00000449116 TMX1Q9H3N1 280 aa15.99■□□□□ 0.15
SHANK2-210ENST00000449116 PCIF1Q9H4Z3 704 aa15.99■□□□□ 0.15
SHANK2-210ENST00000449116 CBX8Q9HC52 389 aa15.99■□□□□ 0.15
SHANK2-210ENST00000449116 HSPBP1Q9NZL4 362 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms