RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 DNM3Q9UQ16 869 aa5.99□□□□□ -1.45
HMGB3P6-201ENST00000444896 IPPQ9Y573 584 aa5.99□□□□□ -1.45
HMGB3P6-201ENST00000444896 PRPF3O43395 683 aaKnown RBP5.98□□□□□ -1.45
HMGB3P6-201ENST00000444896 HTRA2O43464 458 aaPredicted RBP5.98□□□□□ -1.45
HMGB3P6-201ENST00000444896 SLC26A4O43511 780 aa5.98□□□□□ -1.45
HMGB3P6-201ENST00000444896 TSPAN6O43657 245 aa5.98□□□□□ -1.45
HMGB3P6-201ENST00000444896 AKR1B10O60218 316 aa5.98□□□□□ -1.45
HMGB3P6-201ENST00000444896 PRAMEF4O60810 478 aa5.98□□□□□ -1.45
HMGB3P6-201ENST00000444896 SCGB1D2O95969 90 aa5.98□□□□□ -1.45
HMGB3P6-201ENST00000444896 JUNP05412 331 aaKnown RBP5.98□□□□□ -1.45
HMGB3P6-201ENST00000444896 PF4V1P10720 104 aa5.98□□□□□ -1.45
HMGB3P6-201ENST00000444896 RAC3P60763 192 aa5.98□□□□□ -1.45
HMGB3P6-201ENST00000444896 MGAT2Q10469 447 aa5.98□□□□□ -1.45
HMGB3P6-201ENST00000444896 NOMO1Q15155 1222 aa5.98□□□□□ -1.45
HMGB3P6-201ENST00000444896 PPP2R5AQ15172 486 aa5.98□□□□□ -1.45
HMGB3P6-201ENST00000444896 SURF1Q15526 300 aa5.98□□□□□ -1.45
HMGB3P6-201ENST00000444896 TPH2Q8IWU9 490 aa5.98□□□□□ -1.45
HMGB3P6-201ENST00000444896 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.98□□□□□ -1.45
HMGB3P6-201ENST00000444896 TEPSINQ96N21 525 aa5.98□□□□□ -1.45
HMGB3P6-201ENST00000444896 LMF1Q96S06 567 aa5.98□□□□□ -1.45
HMGB3P6-201ENST00000444896 ADI1Q9BV57 179 aa5.98□□□□□ -1.45
HMGB3P6-201ENST00000444896 RAPGEFL1Q9UHV5 662 aa5.98□□□□□ -1.45
HMGB3P6-201ENST00000444896 INTUQ9ULD6 942 aa5.98□□□□□ -1.45
HMGB3P6-201ENST00000444896 OAZ3Q9UMX2 235 aa5.98□□□□□ -1.45
HMGB3P6-201ENST00000444896 SIK3Q9Y2K2 1263 aa5.98□□□□□ -1.45
HMGB3P6-201ENST00000444896 WNT10BO00744 389 aa5.97□□□□□ -1.45
HMGB3P6-201ENST00000444896 IL33O95760 270 aa5.97□□□□□ -1.45
HMGB3P6-201ENST00000444896 PLATP00750 562 aa5.97□□□□□ -1.45
HMGB3P6-201ENST00000444896 HMGB1P09429 215 aaKnown RBP5.97□□□□□ -1.45
HMGB3P6-201ENST00000444896 CR2P20023 1033 aa5.97□□□□□ -1.45
HMGB3P6-201ENST00000444896 SLC6A9P48067 706 aa5.97□□□□□ -1.45
HMGB3P6-201ENST00000444896 WNT3AP56704 352 aa5.97□□□□□ -1.45
HMGB3P6-201ENST00000444896 RIN1Q13671 783 aa5.97□□□□□ -1.45
HMGB3P6-201ENST00000444896 MST1LQ2TV78 715 aa5.97□□□□□ -1.45
HMGB3P6-201ENST00000444896 SLFN13Q68D06 897 aa5.97□□□□□ -1.45
HMGB3P6-201ENST00000444896 FMNL3Q8IVF7 1028 aa5.97□□□□□ -1.45
HMGB3P6-201ENST00000444896 CHPFQ8IZ52 775 aa5.97□□□□□ -1.45
HMGB3P6-201ENST00000444896 CMTM4Q8IZR5 234 aa5.97□□□□□ -1.45
HMGB3P6-201ENST00000444896 GNRHR2Q96P88 292 aa5.97□□□□□ -1.45
HMGB3P6-201ENST00000444896 LRRC37BQ96QE4 947 aa5.97□□□□□ -1.45
HMGB3P6-201ENST00000444896 BDH2Q9BUT1 245 aa5.97□□□□□ -1.45
HMGB3P6-201ENST00000444896 C12orf65Q9H3J6 166 aaKnown RBP5.97□□□□□ -1.45
HMGB3P6-201ENST00000444896 TRPS1Q9UHF7 1281 aa5.97□□□□□ -1.45
HMGB3P6-201ENST00000444896 TCEAL9Q9UHQ7 104 aa5.97□□□□□ -1.45
HMGB3P6-201ENST00000444896 ZBTB21Q9ULJ3 1066 aa5.97□□□□□ -1.45
HMGB3P6-201ENST00000444896 PNMA8BQ9ULN7 279 aaPredicted RBP5.97□□□□□ -1.45
HMGB3P6-201ENST00000444896 A0A0G2JLL6 359 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P6-201ENST00000444896 CCDC154A6NI56 674 aa5.96□□□□□ -1.46
HMGB3P6-201ENST00000444896 PHF2O75151 1096 aa5.96□□□□□ -1.46
HMGB3P6-201ENST00000444896 POU2F2P09086 479 aa5.96□□□□□ -1.46
HMGB3P6-201ENST00000444896 SYN1P17600 705 aa5.96□□□□□ -1.46
HMGB3P6-201ENST00000444896 CASRP41180 1078 aa5.96□□□□□ -1.46
HMGB3P6-201ENST00000444896 FXR1P51114 621 aaKnown RBP eCLIP5.96□□□□□ -1.46
HMGB3P6-201ENST00000444896 PLP2Q04941 152 aa5.96□□□□□ -1.46
HMGB3P6-201ENST00000444896 C3orf36Q3SXR2 165 aa5.96□□□□□ -1.46
HMGB3P6-201ENST00000444896 RRP12Q5JTH9 1297 aaKnown RBP5.96□□□□□ -1.46
HMGB3P6-201ENST00000444896 TAX1BP1Q86VP1 789 aa5.96□□□□□ -1.46
HMGB3P6-201ENST00000444896 PRR18Q8N4B5 295 aa5.96□□□□□ -1.46
HMGB3P6-201ENST00000444896 SHCBP1Q8NEM2 672 aa5.96□□□□□ -1.46
HMGB3P6-201ENST00000444896 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.96□□□□□ -1.46
HMGB3P6-201ENST00000444896 C20orf173Q96LM9 149 aa5.96□□□□□ -1.46
HMGB3P6-201ENST00000444896 NUP88Q99567 741 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P6-201ENST00000444896 RTEL1Q9NZ71 1219 aa5.96□□□□□ -1.46
HMGB3P6-201ENST00000444896 GPRC5DQ9NZD1 345 aa5.96□□□□□ -1.46
HMGB3P6-201ENST00000444896 CHPF2Q9P2E5 772 aa5.96□□□□□ -1.46
HMGB3P6-201ENST00000444896 NOB1Q9ULX3 412 aaKnown RBP5.96□□□□□ -1.46
HMGB3P6-201ENST00000444896 UBE2QL1A1L167 161 aa5.95□□□□□ -1.46
HMGB3P6-201ENST00000444896 GPR42O15529 346 aa5.95□□□□□ -1.46
HMGB3P6-201ENST00000444896 ADCY6O43306 1168 aa5.95□□□□□ -1.46
HMGB3P6-201ENST00000444896 CDC14BO60729 498 aa5.95□□□□□ -1.46
HMGB3P6-201ENST00000444896 ITGA10O75578 1167 aa5.95□□□□□ -1.46
HMGB3P6-201ENST00000444896 VCAM1P19320 739 aa5.95□□□□□ -1.46
HMGB3P6-201ENST00000444896 PDCP20941 246 aa5.95□□□□□ -1.46
HMGB3P6-201ENST00000444896 AKAP5P24588 427 aa5.95□□□□□ -1.46
HMGB3P6-201ENST00000444896 SREBF1P36956 1147 aa5.95□□□□□ -1.46
HMGB3P6-201ENST00000444896 SLC16A1P53985 500 aa5.95□□□□□ -1.46
HMGB3P6-201ENST00000444896 IL10RAQ13651 578 aa5.95□□□□□ -1.46
HMGB3P6-201ENST00000444896 UAP1L1Q3KQV9 507 aa5.95□□□□□ -1.46
HMGB3P6-201ENST00000444896 FAM102BQ5T8I3 360 aa5.95□□□□□ -1.46
HMGB3P6-201ENST00000444896 KRT40Q6A162 431 aa5.95□□□□□ -1.46
HMGB3P6-201ENST00000444896 LIMS2Q7Z4I7 341 aa5.95□□□□□ -1.46
HMGB3P6-201ENST00000444896 MIER2Q8N344 545 aa5.95□□□□□ -1.46
HMGB3P6-201ENST00000444896 ZNF480Q8WV37 535 aa5.95□□□□□ -1.46
HMGB3P6-201ENST00000444896 RBM15Q96T37 977 aaKnown RBP eCLIP5.95□□□□□ -1.46
HMGB3P6-201ENST00000444896 PLA2G12BQ9BX93 195 aa5.95□□□□□ -1.46
HMGB3P6-201ENST00000444896 CSRNP2Q9H175 543 aa5.95□□□□□ -1.46
HMGB3P6-201ENST00000444896 NPEPPSL1A6NEC2 478 aa5.94□□□□□ -1.46
HMGB3P6-201ENST00000444896 GYPEP15421 78 aa5.94□□□□□ -1.46
HMGB3P6-201ENST00000444896 LPOP22079 712 aaPredicted RBP5.94□□□□□ -1.46
HMGB3P6-201ENST00000444896 CYP2C19P33261 490 aa5.94□□□□□ -1.46
HMGB3P6-201ENST00000444896 DUSP2Q05923 314 aa5.94□□□□□ -1.46
HMGB3P6-201ENST00000444896 FAM180AQ6UWF9 173 aa5.94□□□□□ -1.46
HMGB3P6-201ENST00000444896 EPM2AIP1Q7L775 607 aaPredicted RBP5.94□□□□□ -1.46
HMGB3P6-201ENST00000444896 CATIPQ7Z7H3 387 aa5.94□□□□□ -1.46
HMGB3P6-201ENST00000444896 TCEAL8Q8IYN2 117 aa5.94□□□□□ -1.46
HMGB3P6-201ENST00000444896 REPS2Q8NFH8 660 aa5.94□□□□□ -1.46
HMGB3P6-201ENST00000444896 OR7D4Q8NG98 312 aa5.94□□□□□ -1.46
HMGB3P6-201ENST00000444896 GTPBP4Q9BZE4 634 aaKnown RBP5.94□□□□□ -1.46
HMGB3P6-201ENST00000444896 SLC12A5Q9H2X9 1139 aa5.94□□□□□ -1.46
HMGB3P6-201ENST00000444896 BCO1Q9HAY6 547 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms