RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 EIF2AQ9BY44 585 aaKnown RBP13□□□□□ -0.33
HSPG2-206ENST00000439717 MRPL9Q9BYD2 267 aaKnown RBP13□□□□□ -0.33
HSPG2-206ENST00000439717 MRPL4Q9BYD3 311 aaKnown RBP13□□□□□ -0.33
HSPG2-206ENST00000439717 ZHX3Q9H4I2 956 aa13□□□□□ -0.33
HSPG2-206ENST00000439717 PRDM12Q9H4Q4 367 aa13□□□□□ -0.33
HSPG2-206ENST00000439717 PDZD7Q9H5P4 517 aa13□□□□□ -0.33
HSPG2-206ENST00000439717 CERS4Q9HA82 394 aa13□□□□□ -0.33
HSPG2-206ENST00000439717 USP25Q9UHP3 1055 aa13□□□□□ -0.33
HSPG2-206ENST00000439717 TNFSF13BQ9Y275 285 aa13□□□□□ -0.33
HSPG2-206ENST00000439717 STXBP5LQ9Y2K9 1186 aa13□□□□□ -0.33
HSPG2-206ENST00000439717 IPPQ9Y573 584 aa13□□□□□ -0.33
HSPG2-206ENST00000439717 MRPL42Q9Y6G3 142 aaKnown RBP13□□□□□ -0.33
HSPG2-206ENST00000439717 ZMYM2Q9UBW7 1377 aa12.99□□□□□ -0.33
HSPG2-206ENST00000439717 FAM237AA0A1B0GTK4 181 aa12.99□□□□□ -0.33
HSPG2-206ENST00000439717 OFD1O75665 1012 aa12.99□□□□□ -0.33
HSPG2-206ENST00000439717 NPTXRO95502 500 aa12.99□□□□□ -0.33
HSPG2-206ENST00000439717 ITGA4P13612 1032 aa12.99□□□□□ -0.33
HSPG2-206ENST00000439717 CTNNB1P35222 781 aa12.99□□□□□ -0.33
HSPG2-206ENST00000439717 DCAF4L1Q3SXM0 396 aa12.99□□□□□ -0.33
HSPG2-206ENST00000439717 CNNM4Q6P4Q7 775 aa12.99□□□□□ -0.33
HSPG2-206ENST00000439717 AGMOQ6ZNB7 445 aa12.99□□□□□ -0.33
HSPG2-206ENST00000439717 DYMQ7RTS9 669 aa12.99□□□□□ -0.33
HSPG2-206ENST00000439717 TAS1R3Q7RTX0 852 aa12.99□□□□□ -0.33
HSPG2-206ENST00000439717 HAUS6Q7Z4H7 955 aa12.99□□□□□ -0.33
HSPG2-206ENST00000439717 SPRED2Q7Z698 418 aa12.99□□□□□ -0.33
HSPG2-206ENST00000439717 FAM178BQ8IXR5 827 aa12.99□□□□□ -0.33
HSPG2-206ENST00000439717 LRRC43Q8N309 656 aa12.99□□□□□ -0.33
HSPG2-206ENST00000439717 HELQQ8TDG4 1101 aa12.99□□□□□ -0.33
HSPG2-206ENST00000439717 MYLIPQ8WY64 445 aa12.99□□□□□ -0.33
HSPG2-206ENST00000439717 LPPQ93052 612 aa12.99□□□□□ -0.33
HSPG2-206ENST00000439717 ACO2Q99798 780 aaKnown RBP12.99□□□□□ -0.33
HSPG2-206ENST00000439717 ST6GALNAC4Q9H4F1 302 aa12.99□□□□□ -0.33
HSPG2-206ENST00000439717 RSAD1Q9HA92 442 aa12.99□□□□□ -0.33
HSPG2-206ENST00000439717 AAASQ9NRG9 546 aa12.99□□□□□ -0.33
HSPG2-206ENST00000439717 CHMP5Q9NZZ3 219 aa12.99□□□□□ -0.33
HSPG2-206ENST00000439717 HPSEQ9Y251 543 aa12.99□□□□□ -0.33
HSPG2-206ENST00000439717 GIT1Q9Y2X7 761 aa12.99□□□□□ -0.33
HSPG2-206ENST00000439717 FRMD3A2A2Y4 597 aa12.98□□□□□ -0.33
HSPG2-206ENST00000439717 CARNS1A5YM72 827 aa12.98□□□□□ -0.33
HSPG2-206ENST00000439717 EPOPA6NHQ4 379 aa12.98□□□□□ -0.33
HSPG2-206ENST00000439717 TTLL13PA6NNM8 815 aa12.98□□□□□ -0.33
HSPG2-206ENST00000439717 H3BNC9 293 aa12.98□□□□□ -0.33
HSPG2-206ENST00000439717 K7ENM7 598 aa12.98□□□□□ -0.33
HSPG2-206ENST00000439717 INPPL1O15357 1258 aa12.98□□□□□ -0.33
HSPG2-206ENST00000439717 EDN1P05305 212 aa12.98□□□□□ -0.33
HSPG2-206ENST00000439717 FOSL2P15408 326 aa12.98□□□□□ -0.33
HSPG2-206ENST00000439717 PFKFB1P16118 471 aa12.98□□□□□ -0.33
HSPG2-206ENST00000439717 POU3F3P20264 500 aaPredicted RBP12.98□□□□□ -0.33
HSPG2-206ENST00000439717 CSPP1Q1MSJ5 1256 aa12.98□□□□□ -0.33
HSPG2-206ENST00000439717 NOMO2Q5JPE7 1267 aa12.98□□□□□ -0.33
HSPG2-206ENST00000439717 ZPBP2Q6X784 338 aa12.98□□□□□ -0.33
HSPG2-206ENST00000439717 CDR2LQ86X02 465 aaPredicted RBP12.98□□□□□ -0.33
HSPG2-206ENST00000439717 CCDC65Q8IXS2 484 aa12.98□□□□□ -0.33
HSPG2-206ENST00000439717 CEP57L1Q8IYX8 460 aa12.98□□□□□ -0.33
HSPG2-206ENST00000439717 URGCPQ8TCY9 931 aa12.98□□□□□ -0.33
HSPG2-206ENST00000439717 P2RX5Q93086 422 aa12.98□□□□□ -0.33
HSPG2-206ENST00000439717 FIZ1Q96SL8 496 aa12.98□□□□□ -0.33
HSPG2-206ENST00000439717 C7orf25Q9BPX7 421 aa12.98□□□□□ -0.33
HSPG2-206ENST00000439717 C11orf84Q9BUA3 381 aaPredicted RBP12.98□□□□□ -0.33
HSPG2-206ENST00000439717 CWH43Q9H720 699 aa12.98□□□□□ -0.33
HSPG2-206ENST00000439717 GDPD2Q9HCC8 539 aa12.98□□□□□ -0.33
HSPG2-206ENST00000439717 TYW1Q9NV66 732 aaKnown RBP12.98□□□□□ -0.33
HSPG2-206ENST00000439717 LMCD1Q9NZU5 365 aa12.98□□□□□ -0.33
HSPG2-206ENST00000439717 KANSL3Q9P2N6 904 aa12.98□□□□□ -0.33
HSPG2-206ENST00000439717 MTUS1Q9ULD2 1270 aa12.98□□□□□ -0.33
HSPG2-206ENST00000439717 TBX20Q9UMR3 447 aa12.98□□□□□ -0.33
HSPG2-206ENST00000439717 CHD7Q9P2D1 2997 aa12.98□□□□□ -0.33
HSPG2-206ENST00000439717 RALGAPA2Q2PPJ7 1873 aa12.97□□□□□ -0.33
HSPG2-206ENST00000439717 FNDC1Q4ZHG4 1894 aaPredicted RBP12.97□□□□□ -0.33
HSPG2-206ENST00000439717 A0A1B0GVL5 298 aa12.97□□□□□ -0.33
HSPG2-206ENST00000439717 MEIS3P2A8K0S8 358 aa12.97□□□□□ -0.33
HSPG2-206ENST00000439717 TOM1L1O75674 476 aa12.97□□□□□ -0.33
HSPG2-206ENST00000439717 SLFN14P0C7P3 912 aa12.97□□□□□ -0.33
HSPG2-206ENST00000439717 IDEP14735 1019 aa12.97□□□□□ -0.33
HSPG2-206ENST00000439717 LAG3P18627 525 aa12.97□□□□□ -0.33
HSPG2-206ENST00000439717 PROZP22891 400 aa12.97□□□□□ -0.33
HSPG2-206ENST00000439717 GTF2BQ00403 316 aa12.97□□□□□ -0.33
HSPG2-206ENST00000439717 GPM6BQ13491 265 aa12.97□□□□□ -0.33
HSPG2-206ENST00000439717 ADGRE1Q14246 886 aa12.97□□□□□ -0.33
HSPG2-206ENST00000439717 LONRF3Q496Y0 759 aa12.97□□□□□ -0.33
HSPG2-206ENST00000439717 SPOUT1Q5T280 376 aaKnown RBP12.97□□□□□ -0.33
HSPG2-206ENST00000439717 EEF1DP3Q658K8 133 aa12.97□□□□□ -0.33
HSPG2-206ENST00000439717 LRRC55Q6ZSA7 311 aa12.97□□□□□ -0.33
HSPG2-206ENST00000439717 ZNF720Q7Z2F6 126 aa12.97□□□□□ -0.33
HSPG2-206ENST00000439717 SFR1Q86XK3 245 aa12.97□□□□□ -0.33
HSPG2-206ENST00000439717 MRPS27Q92552 414 aaKnown RBP12.97□□□□□ -0.33
HSPG2-206ENST00000439717 HVCN1Q96D96 273 aa12.97□□□□□ -0.33
HSPG2-206ENST00000439717 TARS2Q9BW92 718 aaKnown RBP12.97□□□□□ -0.33
HSPG2-206ENST00000439717 TRIM9Q9C026 710 aa12.97□□□□□ -0.33
HSPG2-206ENST00000439717 NXF3Q9H4D5 531 aaKnown RBP12.97□□□□□ -0.33
HSPG2-206ENST00000439717 PTPRHQ9HD43 1115 aa12.97□□□□□ -0.33
HSPG2-206ENST00000439717 OLFML3Q9NRN5 406 aa12.97□□□□□ -0.33
HSPG2-206ENST00000439717 PANK4Q9NVE7 773 aa12.97□□□□□ -0.33
HSPG2-206ENST00000439717 USP20Q9Y2K6 914 aa12.97□□□□□ -0.33
HSPG2-206ENST00000439717 HES2Q9Y543 173 aa12.97□□□□□ -0.33
HSPG2-206ENST00000439717 PCDHB12Q9Y5F1 795 aa12.97□□□□□ -0.33
HSPG2-206ENST00000439717 MYH11P35749 1972 aa12.96□□□□□ -0.33
HSPG2-206ENST00000439717 ARL5CA6NH57 179 aa12.96□□□□□ -0.33
HSPG2-206ENST00000439717 RFXAPO00287 272 aa12.96□□□□□ -0.33
HSPG2-206ENST00000439717 GTPBP6O43824 516 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms