RNA–Protein interactions for RNA: ENST00000405598.5

CHEK2-209, Transcript of checkpoint kinase 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CHEK2, Length 1,959 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-209ENST00000405598 C7orf31Q8N865 590 aa11.3□□□□□ -0.6
CHEK2-209ENST00000405598 RETREG2Q8NC44 543 aa11.3□□□□□ -0.6
CHEK2-209ENST00000405598 CACTINQ8WUQ7 758 aaKnown RBP11.3□□□□□ -0.6
CHEK2-209ENST00000405598 CPLX3Q8WVH0 158 aa11.3□□□□□ -0.6
CHEK2-209ENST00000405598 POMGNT1Q8WZA1 660 aa11.3□□□□□ -0.6
CHEK2-209ENST00000405598 TSC1Q92574 1164 aa11.3□□□□□ -0.6
CHEK2-209ENST00000405598 ELMO3Q96BJ8 720 aa11.3□□□□□ -0.6
CHEK2-209ENST00000405598 ABHD8Q96I13 439 aa11.3□□□□□ -0.6
CHEK2-209ENST00000405598 CPB2Q96IY4 423 aa11.3□□□□□ -0.6
CHEK2-209ENST00000405598 INO80BQ9C086 356 aaPredicted RBP11.3□□□□□ -0.6
CHEK2-209ENST00000405598 NDST4Q9H3R1 872 aa11.3□□□□□ -0.6
CHEK2-209ENST00000405598 PPME1Q9Y570 386 aa11.3□□□□□ -0.6
CHEK2-209ENST00000405598 PHLPP2Q6ZVD8 1323 aa11.29□□□□□ -0.6
CHEK2-209ENST00000405598 NRCAMQ92823 1304 aa11.29□□□□□ -0.6
CHEK2-209ENST00000405598 C17orf102A2RUQ5 167 aa11.29□□□□□ -0.6
CHEK2-209ENST00000405598 MAGEB2O15479 319 aa11.29□□□□□ -0.6
CHEK2-209ENST00000405598 HOXC8P31273 242 aa11.29□□□□□ -0.6
CHEK2-209ENST00000405598 LIG4P49917 911 aa11.29□□□□□ -0.6
CHEK2-209ENST00000405598 DNM2P50570 870 aa11.29□□□□□ -0.6
CHEK2-209ENST00000405598 ADKP55263 362 aaKnown RBP11.29□□□□□ -0.6
CHEK2-209ENST00000405598 PTENP60484 403 aa11.29□□□□□ -0.6
CHEK2-209ENST00000405598 MXD4Q14582 209 aaPredicted RBP11.29□□□□□ -0.6
CHEK2-209ENST00000405598 MAN2A1Q16706 1144 aa11.29□□□□□ -0.6
CHEK2-209ENST00000405598 C1orf220Q5T0J3 134 aa11.29□□□□□ -0.6
CHEK2-209ENST00000405598 TCERG1LQ5VWI1 586 aa11.29□□□□□ -0.6
CHEK2-209ENST00000405598 SCARA3Q6AZY7 606 aa11.29□□□□□ -0.6
CHEK2-209ENST00000405598 TMEM40Q8WWA1 233 aa11.29□□□□□ -0.6
CHEK2-209ENST00000405598 NLRP7Q8WX94 980 aa11.29□□□□□ -0.6
CHEK2-209ENST00000405598 POP1Q99575 1024 aaKnown RBP11.29□□□□□ -0.6
CHEK2-209ENST00000405598 OSMRQ99650 979 aa11.29□□□□□ -0.6
CHEK2-209ENST00000405598 HMX1Q9NP08 348 aaPredicted RBP11.29□□□□□ -0.6
CHEK2-209ENST00000405598 TOPORSQ9NS56 1045 aaPredicted RBP11.29□□□□□ -0.6
CHEK2-209ENST00000405598 CGNQ9P2M7 1197 aaKnown RBP11.29□□□□□ -0.6
CHEK2-209ENST00000405598 ARMCX3Q9UH62 379 aaPredicted RBP11.29□□□□□ -0.6
CHEK2-209ENST00000405598 RRN3P2A6NIE6 340 aa11.28□□□□□ -0.6
CHEK2-209ENST00000405598 GAS2O43903 313 aaKnown RBP11.28□□□□□ -0.6
CHEK2-209ENST00000405598 GPR32O75388 356 aa11.28□□□□□ -0.6
CHEK2-209ENST00000405598 TNFSF9P41273 254 aa11.28□□□□□ -0.6
CHEK2-209ENST00000405598 ACOT2P49753 483 aa11.28□□□□□ -0.6
CHEK2-209ENST00000405598 FXR1P51114 621 aaKnown RBP eCLIP11.28□□□□□ -0.6
CHEK2-209ENST00000405598 ACLYP53396 1101 aa11.28□□□□□ -0.6
CHEK2-209ENST00000405598 MARSP56192 900 aaKnown RBP11.28□□□□□ -0.6
CHEK2-209ENST00000405598 NKX3-2P78367 333 aa11.28□□□□□ -0.6
CHEK2-209ENST00000405598 KCNMA1Q12791 1236 aa11.28□□□□□ -0.6
CHEK2-209ENST00000405598 STRN3Q13033 797 aa11.28□□□□□ -0.6
CHEK2-209ENST00000405598 TBX2Q13207 712 aaPredicted RBP11.28□□□□□ -0.6
CHEK2-209ENST00000405598 AMHR2Q16671 573 aa11.28□□□□□ -0.6
CHEK2-209ENST00000405598 FILIP1LQ4L180 1135 aa11.28□□□□□ -0.6
CHEK2-209ENST00000405598 TAF3Q5VWG9 929 aa11.28□□□□□ -0.6
CHEK2-209ENST00000405598 SPECC1LQ69YQ0 1117 aa11.28□□□□□ -0.6
CHEK2-209ENST00000405598 CEP120Q8N960 986 aa11.28□□□□□ -0.6
CHEK2-209ENST00000405598 ANKRD20A12PQ8NF67 263 aa11.28□□□□□ -0.6
CHEK2-209ENST00000405598 SLC35C1Q96A29 364 aa11.28□□□□□ -0.6
CHEK2-209ENST00000405598 HVCN1Q96D96 273 aa11.28□□□□□ -0.6
CHEK2-209ENST00000405598 SCLT1Q96NL6 688 aa11.28□□□□□ -0.6
CHEK2-209ENST00000405598 FAM213AQ9BRX8 229 aa11.28□□□□□ -0.6
CHEK2-209ENST00000405598 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.28□□□□□ -0.6
CHEK2-209ENST00000405598 ADAMTS10Q9H324 1103 aa11.28□□□□□ -0.6
CHEK2-209ENST00000405598 SPC25Q9HBM1 224 aa11.28□□□□□ -0.6
CHEK2-209ENST00000405598 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.28□□□□□ -0.68e-8■■■■■ 44.9
CHEK2-209ENST00000405598 PCDH10Q9P2E7 1040 aa11.28□□□□□ -0.6
CHEK2-209ENST00000405598 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.28□□□□□ -0.6
CHEK2-209ENST00000405598 ABLIM1O14639 778 aa11.28□□□□□ -0.6
CHEK2-209ENST00000405598 FGFR1OPO95684 399 aaKnown RBP11.28□□□□□ -0.6
CHEK2-209ENST00000405598 GYPCP04921 128 aa11.28□□□□□ -0.6
CHEK2-209ENST00000405598 EPB41P11171 864 aaKnown RBP11.28□□□□□ -0.6
CHEK2-209ENST00000405598 RPL13P26373 211 aaKnown RBP11.28□□□□□ -0.6
CHEK2-209ENST00000405598 PSMC2P35998 433 aaKnown RBP11.28□□□□□ -0.6
CHEK2-209ENST00000405598 RBL2Q08999 1139 aa11.28□□□□□ -0.6
CHEK2-209ENST00000405598 KCNH2Q12809 1159 aa11.28□□□□□ -0.6
CHEK2-209ENST00000405598 NFIL3Q16649 462 aa11.28□□□□□ -0.6
CHEK2-209ENST00000405598 CBWD6Q4V339 395 aa11.28□□□□□ -0.6
CHEK2-209ENST00000405598 CBWD3Q5JTY5 395 aa11.28□□□□□ -0.6
CHEK2-209ENST00000405598 CBWD5Q5RIA9 395 aa11.28□□□□□ -0.6
CHEK2-209ENST00000405598 LMBRD2Q68DH5 695 aaPredicted RBP11.28□□□□□ -0.6
CHEK2-209ENST00000405598 CRELD2Q6UXH1 353 aaPredicted RBP11.28□□□□□ -0.6
CHEK2-209ENST00000405598 NYAP1Q6ZVC0 841 aa11.28□□□□□ -0.6
CHEK2-209ENST00000405598 SLC9A9Q8IVB4 645 aa11.28□□□□□ -0.6
CHEK2-209ENST00000405598 TMEM192Q8IY95 271 aa11.28□□□□□ -0.6
CHEK2-209ENST00000405598 XXYLT1Q8NBI6 393 aa11.28□□□□□ -0.6
CHEK2-209ENST00000405598 ACO2Q99798 780 aaKnown RBP11.28□□□□□ -0.6
CHEK2-209ENST00000405598 JPH2Q9BR39 696 aaPredicted RBP11.28□□□□□ -0.6
CHEK2-209ENST00000405598 FZD8Q9H461 694 aa11.28□□□□□ -0.6
CHEK2-209ENST00000405598 TMEM134Q9H6X4 195 aa11.28□□□□□ -0.6
CHEK2-209ENST00000405598 TRMT13Q9NUP7 481 aaKnown RBP11.28□□□□□ -0.6
CHEK2-209ENST00000405598 GTF2IRD1Q9UHL9 959 aa11.28□□□□□ -0.6
CHEK2-209ENST00000405598 EXOC7Q9UPT5 735 aa11.28□□□□□ -0.6
CHEK2-209ENST00000405598 ANK1P16157 1881 aa11.28□□□□□ -0.6
CHEK2-209ENST00000405598 TNRC18O15417 2968 aaPredicted RBP11.28□□□□□ -0.6
CHEK2-209ENST00000405598 PTPRJQ12913 1337 aa11.27□□□□□ -0.6
CHEK2-209ENST00000405598 SLC16A3O15427 465 aaKnown RBP11.27□□□□□ -0.61
CHEK2-209ENST00000405598 TUBB4AP04350 444 aa11.27□□□□□ -0.61
CHEK2-209ENST00000405598 CTSHP09668 335 aa11.27□□□□□ -0.61
CHEK2-209ENST00000405598 ACTN1P12814 892 aa11.27□□□□□ -0.61
CHEK2-209ENST00000405598 CST5P28325 142 aaPredicted RBP11.27□□□□□ -0.61
CHEK2-209ENST00000405598 MATR3P43243 847 aaKnown RBP eCLIP11.27□□□□□ -0.61
CHEK2-209ENST00000405598 KCNJ6P48051 423 aa11.27□□□□□ -0.61
CHEK2-209ENST00000405598 OSTNP61366 133 aa11.27□□□□□ -0.61
CHEK2-209ENST00000405598 PPP3CAQ08209 521 aa11.27□□□□□ -0.61
CHEK2-209ENST00000405598 SNRNP35Q16560 246 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms