RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 ADAMTS4O75173 837 aa25.26■■□□□ 1.63
SDF4-202ENST00000360001 VAMP7P51809 220 aa25.26■■□□□ 1.63
SDF4-202ENST00000360001 DLG4P78352 724 aa25.26■■□□□ 1.63
SDF4-202ENST00000360001 MBTD1Q05BQ5 628 aa25.26■■□□□ 1.63
SDF4-202ENST00000360001 SLFN12LQ6IEE8 588 aa25.26■■□□□ 1.63
SDF4-202ENST00000360001 GPD1LQ8N335 351 aa25.26■■□□□ 1.63
SDF4-202ENST00000360001 C17orf53Q8N3J3 647 aaPredicted RBP25.26■■□□□ 1.63
SDF4-202ENST00000360001 MAP7D2Q96T17 732 aa25.26■■□□□ 1.63
SDF4-202ENST00000360001 SPC25Q9HBM1 224 aa25.26■■□□□ 1.63
SDF4-202ENST00000360001 A0A087WZ62 844 aa25.25■■□□□ 1.63
SDF4-202ENST00000360001 PHKA2P46019 1235 aa25.25■■□□□ 1.63
SDF4-202ENST00000360001 FMO5P49326 533 aa25.25■■□□□ 1.63
SDF4-202ENST00000360001 C1orf220Q5T0J3 134 aa25.25■■□□□ 1.63
SDF4-202ENST00000360001 FDXACB1Q9BRP7 624 aaPredicted RBP25.25■■□□□ 1.63
SDF4-202ENST00000360001 LSM14BQ9BX40 385 aaKnown RBP25.25■■□□□ 1.63
SDF4-202ENST00000360001 XPNPEP3Q9NQH7 507 aa25.25■■□□□ 1.63
SDF4-202ENST00000360001 A0A0B4J269 797 aa25.25■■□□□ 1.63
SDF4-202ENST00000360001 GTPBP10A4D1E9 387 aaKnown RBP25.25■■□□□ 1.63
SDF4-202ENST00000360001 KIAA0391O15091 583 aaKnown RBP25.25■■□□□ 1.63
SDF4-202ENST00000360001 ZNF500O60304 480 aaPredicted RBP25.25■■□□□ 1.63
SDF4-202ENST00000360001 STX10O60499 249 aa25.25■■□□□ 1.63
SDF4-202ENST00000360001 FECHP22830 423 aa25.25■■□□□ 1.63
SDF4-202ENST00000360001 NEK11Q8NG66 645 aa25.25■■□□□ 1.63
SDF4-202ENST00000360001 MFSD14AQ96MC6 490 aa25.25■■□□□ 1.63
SDF4-202ENST00000360001 DNAJC7Q99615 494 aa25.25■■□□□ 1.63
SDF4-202ENST00000360001 ACO2Q99798 780 aaKnown RBP25.25■■□□□ 1.63
SDF4-202ENST00000360001 RRAGDQ9NQL2 400 aaPredicted RBP25.25■■□□□ 1.63
SDF4-202ENST00000360001 AGO2Q9UKV8 859 aaKnown RBP25.25■■□□□ 1.63
SDF4-202ENST00000360001 SCN10AQ9Y5Y9 1956 aa25.24■■□□□ 1.63
SDF4-202ENST00000360001 INO80B-WBP1J3KQ70 363 aa25.24■■□□□ 1.63
SDF4-202ENST00000360001 ACKR2O00590 384 aa25.24■■□□□ 1.63
SDF4-202ENST00000360001 EXTL3O43909 919 aa25.24■■□□□ 1.63
SDF4-202ENST00000360001 NOL4O94818 638 aa25.24■■□□□ 1.63
SDF4-202ENST00000360001 HOXC8P31273 242 aa25.24■■□□□ 1.63
SDF4-202ENST00000360001 ZBED6P86452 979 aa25.24■■□□□ 1.63
SDF4-202ENST00000360001 CBWD6Q4V339 395 aa25.24■■□□□ 1.63
SDF4-202ENST00000360001 CBWD3Q5JTY5 395 aa25.24■■□□□ 1.63
SDF4-202ENST00000360001 CBWD5Q5RIA9 395 aa25.24■■□□□ 1.63
SDF4-202ENST00000360001 DPY19L2P1Q6NXN4 242 aa25.24■■□□□ 1.63
SDF4-202ENST00000360001 PPP1R16BQ96T49 567 aa25.24■■□□□ 1.63
SDF4-202ENST00000360001 FAM213AQ9BRX8 229 aa25.24■■□□□ 1.63
SDF4-202ENST00000360001 MTG1Q9BT17 334 aaPredicted RBP25.24■■□□□ 1.63
SDF4-202ENST00000360001 INO80BQ9C086 356 aaPredicted RBP25.24■■□□□ 1.63
SDF4-202ENST00000360001 ANKFY1Q9P2R3 1169 aa25.24■■□□□ 1.63
SDF4-202ENST00000360001 IQCF3P0C7M6 154 aa25.24■■□□□ 1.63
SDF4-202ENST00000360001 GPC3P51654 580 aa25.24■■□□□ 1.63
SDF4-202ENST00000360001 EXOC3L4Q17RC7 722 aa25.24■■□□□ 1.63
SDF4-202ENST00000360001 GBP6Q6ZN66 633 aa25.24■■□□□ 1.63
SDF4-202ENST00000360001 OR8K1Q8NGG5 319 aa25.24■■□□□ 1.63
SDF4-202ENST00000360001 KIAA1586Q9HCI6 787 aa25.24■■□□□ 1.63
SDF4-202ENST00000360001 TRIP12Q14669 1992 aaPredicted RBP25.23■■□□□ 1.63
SDF4-202ENST00000360001 SMIM35A0A1B0GVV1 85 aa25.23■■□□□ 1.63
SDF4-202ENST00000360001 TOM1L1O75674 476 aa25.23■■□□□ 1.63
SDF4-202ENST00000360001 SLC9A1P19634 815 aa25.23■■□□□ 1.63
SDF4-202ENST00000360001 APBA1Q02410 837 aa25.23■■□□□ 1.63
SDF4-202ENST00000360001 CYP24A1Q07973 514 aa25.23■■□□□ 1.63
SDF4-202ENST00000360001 ARHGEF6Q15052 776 aa25.23■■□□□ 1.63
SDF4-202ENST00000360001 MSTO1Q9BUK6 570 aa25.23■■□□□ 1.63
SDF4-202ENST00000360001 HDAC6Q9UBN7 1215 aa25.23■■□□□ 1.63
SDF4-202ENST00000360001 PON1P27169 355 aa25.22■■□□□ 1.63
SDF4-202ENST00000360001 PPP3CAQ08209 521 aa25.22■■□□□ 1.63
SDF4-202ENST00000360001 FAM187BQ17R55 369 aa25.22■■□□□ 1.63
SDF4-202ENST00000360001 CXCL17Q6UXB2 119 aa25.22■■□□□ 1.63
SDF4-202ENST00000360001 RUFY4Q6ZNE9 571 aa25.22■■□□□ 1.63
SDF4-202ENST00000360001 KLHDC9Q8NEP7 349 aa25.22■■□□□ 1.63
SDF4-202ENST00000360001 PARD3BQ8TEW8 1205 aa25.22■■□□□ 1.63
SDF4-202ENST00000360001 NAA15Q9BXJ9 866 aaKnown RBP25.22■■□□□ 1.63
SDF4-202ENST00000360001 EDEM3Q9BZQ6 932 aa25.22■■□□□ 1.63
SDF4-202ENST00000360001 PLCB1Q9NQ66 1216 aa25.22■■□□□ 1.63
SDF4-202ENST00000360001 GCNT4Q9P109 453 aa25.22■■□□□ 1.63
SDF4-202ENST00000360001 ZNF233A6NK53 670 aa25.22■■□□□ 1.63
SDF4-202ENST00000360001 ABLIM1O14639 778 aa25.22■■□□□ 1.63
SDF4-202ENST00000360001 ZEB2O60315 1214 aa25.22■■□□□ 1.63
SDF4-202ENST00000360001 CYP2C9P11712 490 aa25.22■■□□□ 1.63
SDF4-202ENST00000360001 KCNJ6P48051 423 aa25.22■■□□□ 1.63
SDF4-202ENST00000360001 NLRP11P59045 1033 aaKnown RBP25.22■■□□□ 1.63
SDF4-202ENST00000360001 ZNF200P98182 395 aaPredicted RBP25.22■■□□□ 1.63
SDF4-202ENST00000360001 CRELD2Q6UXH1 353 aaPredicted RBP25.22■■□□□ 1.63
SDF4-202ENST00000360001 TSHZ1Q6ZSZ6 1077 aa25.22■■□□□ 1.63
SDF4-202ENST00000360001 TMC2Q8TDI7 906 aa25.22■■□□□ 1.63
SDF4-202ENST00000360001 NLRP7Q8WX94 980 aa25.22■■□□□ 1.63
SDF4-202ENST00000360001 FAM49AQ9H0Q0 323 aaPredicted RBP25.22■■□□□ 1.63
SDF4-202ENST00000360001 GANQ9H2C0 597 aa25.22■■□□□ 1.63
SDF4-202ENST00000360001 PRMT7Q9NVM4 692 aaPredicted RBP25.22■■□□□ 1.63
SDF4-202ENST00000360001 C17orf102A2RUQ5 167 aa25.21■■□□□ 1.63
SDF4-202ENST00000360001 CLDN3O15551 220 aa25.21■■□□□ 1.63
SDF4-202ENST00000360001 ARHGAP6O43182 974 aa25.21■■□□□ 1.63
SDF4-202ENST00000360001 TREHO43280 583 aa25.21■■□□□ 1.63
SDF4-202ENST00000360001 B4GALT5O43286 388 aa25.21■■□□□ 1.63
SDF4-202ENST00000360001 PROZP22891 400 aa25.21■■□□□ 1.63
SDF4-202ENST00000360001 MATR3P43243 847 aaKnown RBP eCLIP25.21■■□□□ 1.63
SDF4-202ENST00000360001 PRPF4BQ13523 1007 aaKnown RBP25.21■■□□□ 1.63
SDF4-202ENST00000360001 AMHR2Q16671 573 aa25.21■■□□□ 1.63
SDF4-202ENST00000360001 ZNF410Q86VK4 478 aa25.21■■□□□ 1.63
SDF4-202ENST00000360001 C7orf31Q8N865 590 aa25.21■■□□□ 1.63
SDF4-202ENST00000360001 ZNF397Q8NF99 534 aaPredicted RBP25.21■■□□□ 1.63
SDF4-202ENST00000360001 BAP1Q92560 729 aa25.21■■□□□ 1.63
SDF4-202ENST00000360001 PTPRHQ9HD43 1115 aa25.21■■□□□ 1.63
SDF4-202ENST00000360001 CEP72Q9P209 647 aa25.21■■□□□ 1.63
SDF4-202ENST00000360001 CSDE1O75534 798 aaKnown RBP25.2■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms