RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 KRT13P13646 458 aa17.01■□□□□ 0.31
CTSA-202ENST00000354880 PRPF4BQ13523 1007 aaKnown RBP17.01■□□□□ 0.31
CTSA-202ENST00000354880 FAM187BQ17R55 369 aa17.01■□□□□ 0.31
CTSA-202ENST00000354880 PPFIBP1Q86W92 1011 aa17.01■□□□□ 0.31
CTSA-202ENST00000354880 CBWD2Q8IUF1 395 aa17.01■□□□□ 0.31
CTSA-202ENST00000354880 GPD1LQ8N335 351 aa17.01■□□□□ 0.31
CTSA-202ENST00000354880 CCDC150Q8NCX0 1101 aa17.01■□□□□ 0.31
CTSA-202ENST00000354880 DNAJB3Q8WWF6 145 aa17.01■□□□□ 0.31
CTSA-202ENST00000354880 ZBTB45Q96K62 511 aaPredicted RBP17.01■□□□□ 0.31
CTSA-202ENST00000354880 ANKFY1Q9P2R3 1169 aa17.01■□□□□ 0.31
CTSA-202ENST00000354880 AGO2Q9UKV8 859 aaKnown RBP17.01■□□□□ 0.31
CTSA-202ENST00000354880 CLDN3O15551 220 aa17■□□□□ 0.31
CTSA-202ENST00000354880 IQCF3P0C7M6 154 aa17■□□□□ 0.31
CTSA-202ENST00000354880 SFPQP23246 707 aaKnown RBP eCLIP17■□□□□ 0.31
CTSA-202ENST00000354880 MATR3P43243 847 aaKnown RBP eCLIP17■□□□□ 0.31
CTSA-202ENST00000354880 TMEM62Q0P6H9 643 aa17■□□□□ 0.31
CTSA-202ENST00000354880 TRIM14Q14142 442 aa17■□□□□ 0.31
CTSA-202ENST00000354880 ARID5BQ14865 1188 aa17■□□□□ 0.31
CTSA-202ENST00000354880 KIZQ2M2Z5 673 aa17■□□□□ 0.31
CTSA-202ENST00000354880 FAM47CQ5HY64 1035 aa17■□□□□ 0.31
CTSA-202ENST00000354880 SRGAP1Q7Z6B7 1085 aa17■□□□□ 0.31
CTSA-202ENST00000354880 LRRC8AQ8IWT6 810 aa17■□□□□ 0.31
CTSA-202ENST00000354880 CCDC155Q8N6L0 562 aa17■□□□□ 0.31
CTSA-202ENST00000354880 PRIMPOLQ96LW4 560 aa17■□□□□ 0.31
CTSA-202ENST00000354880 ZNF830Q96NB3 372 aaPredicted RBP17■□□□□ 0.31
CTSA-202ENST00000354880 MSTO1Q9BUK6 570 aa17■□□□□ 0.31
CTSA-202ENST00000354880 HAPLN2Q9GZV7 340 aa17■□□□□ 0.31
CTSA-202ENST00000354880 ADAMTS10Q9H324 1103 aa17■□□□□ 0.31
CTSA-202ENST00000354880 KIAA1586Q9HCI6 787 aa17■□□□□ 0.31
CTSA-202ENST00000354880 A0A0B4J269 797 aa17■□□□□ 0.31
CTSA-202ENST00000354880 MOXD2PA6NHM9 499 aa17■□□□□ 0.31
CTSA-202ENST00000354880 EXTL3O43909 919 aa17■□□□□ 0.31
CTSA-202ENST00000354880 GPR32O75388 356 aa17■□□□□ 0.31
CTSA-202ENST00000354880 CSDE1O75534 798 aaKnown RBP17■□□□□ 0.31
CTSA-202ENST00000354880 LDHAP00338 332 aaKnown RBP17■□□□□ 0.31
CTSA-202ENST00000354880 GYPCP04921 128 aa17■□□□□ 0.31
CTSA-202ENST00000354880 ACLYP53396 1101 aa17■□□□□ 0.31
CTSA-202ENST00000354880 RBL2Q08999 1139 aa17■□□□□ 0.31
CTSA-202ENST00000354880 TAF2Q6P1X5 1199 aa17■□□□□ 0.31
CTSA-202ENST00000354880 TSHZ1Q6ZSZ6 1077 aa17■□□□□ 0.31
CTSA-202ENST00000354880 SESTD1Q86VW0 696 aa17■□□□□ 0.31
CTSA-202ENST00000354880 CACTINQ8WUQ7 758 aaKnown RBP17■□□□□ 0.31
CTSA-202ENST00000354880 PCMTD1Q96MG8 357 aaPredicted RBP17■□□□□ 0.31
CTSA-202ENST00000354880 FAM213AQ9BRX8 229 aa17■□□□□ 0.31
CTSA-202ENST00000354880 TCHPQ9BT92 498 aa17■□□□□ 0.31
CTSA-202ENST00000354880 XRN2Q9H0D6 950 aaKnown RBP eCLIP17■□□□□ 0.31
CTSA-202ENST00000354880 SIK3Q9Y2K2 1263 aa17■□□□□ 0.31
CTSA-202ENST00000354880 FRMPD3Q5JV73 1810 aa17■□□□□ 0.31
CTSA-202ENST00000354880 B4GALT5O43286 388 aa16.99■□□□□ 0.31
CTSA-202ENST00000354880 ADRB2P07550 413 aa16.99■□□□□ 0.31
CTSA-202ENST00000354880 TPM1P09493 284 aa16.99■□□□□ 0.31
CTSA-202ENST00000354880 VAMP7P51809 220 aa16.99■□□□□ 0.31
CTSA-202ENST00000354880 HSP90AA2PQ14568 343 aaPredicted RBP16.99■□□□□ 0.31
CTSA-202ENST00000354880 TMEM132AQ24JP5 1023 aa16.99■□□□□ 0.31
CTSA-202ENST00000354880 SLC9C1Q4G0N8 1177 aa16.99■□□□□ 0.31
CTSA-202ENST00000354880 ATF7IP2Q5U623 682 aa16.99■□□□□ 0.31
CTSA-202ENST00000354880 GDF6Q6KF10 455 aaPredicted RBP16.99■□□□□ 0.31
CTSA-202ENST00000354880 ZNF710Q8N1W2 664 aa16.99■□□□□ 0.31
CTSA-202ENST00000354880 NME8Q8N427 588 aa16.99■□□□□ 0.31
CTSA-202ENST00000354880 CPLX3Q8WVH0 158 aa16.99■□□□□ 0.31
CTSA-202ENST00000354880 TSEN34Q9BSV6 310 aaKnown RBP16.99■□□□□ 0.31
CTSA-202ENST00000354880 NUP58Q9BVL2 599 aa16.99■□□□□ 0.31
CTSA-202ENST00000354880 GCOM2Q9BZD3 368 aaPredicted RBP16.99■□□□□ 0.31
CTSA-202ENST00000354880 KCNF1Q9H3M0 494 aa16.99■□□□□ 0.31
CTSA-202ENST00000354880 GINS2Q9Y248 185 aa16.99■□□□□ 0.31
CTSA-202ENST00000354880 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.99■□□□□ 0.31
CTSA-202ENST00000354880 ZNF233A6NK53 670 aa16.98■□□□□ 0.31
CTSA-202ENST00000354880 TRIM49P0CI25 452 aa16.98■□□□□ 0.31
CTSA-202ENST00000354880 TRIM49CP0CI26 452 aa16.98■□□□□ 0.31
CTSA-202ENST00000354880 TRIM21P19474 475 aaKnown RBP16.98■□□□□ 0.31
CTSA-202ENST00000354880 CASP14P31944 242 aa16.98■□□□□ 0.31
CTSA-202ENST00000354880 KLK7P49862 253 aa16.98■□□□□ 0.31
CTSA-202ENST00000354880 MCCD1P59942 119 aaPredicted RBP16.98■□□□□ 0.31
CTSA-202ENST00000354880 AMHR2Q16671 573 aa16.98■□□□□ 0.31
CTSA-202ENST00000354880 ARRDC4Q8NCT1 418 aa16.98■□□□□ 0.31
CTSA-202ENST00000354880 VTI1AQ96AJ9 217 aa16.98■□□□□ 0.31
CTSA-202ENST00000354880 MFSD14AQ96MC6 490 aa16.98■□□□□ 0.31
CTSA-202ENST00000354880 UNC93B1Q9H1C4 597 aa16.98■□□□□ 0.31
CTSA-202ENST00000354880 GRIN2DO15399 1336 aa16.98■□□□□ 0.31
CTSA-202ENST00000354880 CNTNAP2Q9UHC6 1331 aa16.98■□□□□ 0.31
CTSA-202ENST00000354880 AKR1B15C9JRZ8 316 aaPredicted RBP16.98■□□□□ 0.31
CTSA-202ENST00000354880 PROZP22891 400 aa16.98■□□□□ 0.31
CTSA-202ENST00000354880 ADKP55263 362 aaKnown RBP16.98■□□□□ 0.31
CTSA-202ENST00000354880 MCL1Q07820 350 aa16.98■□□□□ 0.31
CTSA-202ENST00000354880 CYP24A1Q07973 514 aa16.98■□□□□ 0.31
CTSA-202ENST00000354880 GOLGA8FQ08AF8 430 aa16.98■□□□□ 0.31
CTSA-202ENST00000354880 GOLGA8DPQ0D2H9 430 aa16.98■□□□□ 0.31
CTSA-202ENST00000354880 KCNMA1Q12791 1236 aa16.98■□□□□ 0.31
CTSA-202ENST00000354880 LRMPQ12912 555 aa16.98■□□□□ 0.31
CTSA-202ENST00000354880 ITGA7Q13683 1181 aa16.98■□□□□ 0.31
CTSA-202ENST00000354880 FIGNQ5HY92 759 aa16.98■□□□□ 0.31
CTSA-202ENST00000354880 MPZL3Q6UWV2 235 aa16.98■□□□□ 0.31
CTSA-202ENST00000354880 USP37Q86T82 979 aa16.98■□□□□ 0.31
CTSA-202ENST00000354880 TC2NQ8N9U0 490 aa16.98■□□□□ 0.31
CTSA-202ENST00000354880 PARD3BQ8TEW8 1205 aa16.98■□□□□ 0.31
CTSA-202ENST00000354880 GLT1D1Q96MS3 346 aa16.98■□□□□ 0.31
CTSA-202ENST00000354880 OSMRQ99650 979 aa16.98■□□□□ 0.31
CTSA-202ENST00000354880 MMRN2Q9H8L6 949 aa16.98■□□□□ 0.31
CTSA-202ENST00000354880 PTPRHQ9HD43 1115 aa16.98■□□□□ 0.31
CTSA-202ENST00000354880 TNFSF13BQ9Y275 285 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms