RNA–Protein interactions for RNA: ENST00000325327.3

LMNB2-201, Transcript of lamin B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB2, Length 4,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-201ENST00000325327 RAG1P15918 1043 aa17.95■□□□□ 0.46
LMNB2-201ENST00000325327 ZNF280AP59817 542 aaPredicted RBP17.95■□□□□ 0.46
LMNB2-201ENST00000325327 EPC2Q52LR7 807 aa17.95■□□□□ 0.46
LMNB2-201ENST00000325327 MOXD1Q6UVY6 613 aa17.95■□□□□ 0.46
LMNB2-201ENST00000325327 OTOP1Q7RTM1 612 aa17.95■□□□□ 0.46
LMNB2-201ENST00000325327 CBWD2Q8IUF1 395 aa17.95■□□□□ 0.46
LMNB2-201ENST00000325327 MAGOHBQ96A72 148 aaKnown RBP17.95■□□□□ 0.46
LMNB2-201ENST00000325327 TBX20Q9UMR3 447 aa17.95■□□□□ 0.46
LMNB2-201ENST00000325327 PHLPP2Q6ZVD8 1323 aa17.95■□□□□ 0.46
LMNB2-201ENST00000325327 MYPNQ86TC9 1320 aa17.95■□□□□ 0.46
LMNB2-201ENST00000325327 AHDC1Q5TGY3 1603 aaPredicted RBP17.95■□□□□ 0.46
LMNB2-201ENST00000325327 RGS7P49802 495 aa17.95■□□□□ 0.46
LMNB2-201ENST00000325327 FKBP1BP68106 108 aa17.95■□□□□ 0.46
LMNB2-201ENST00000325327 NOTUMQ6P988 496 aa17.95■□□□□ 0.46
LMNB2-201ENST00000325327 SENP7Q9BQF6 1050 aa17.95■□□□□ 0.46
LMNB2-201ENST00000325327 PDGFCQ9NRA1 345 aa17.95■□□□□ 0.46
LMNB2-201ENST00000325327 CAPN15O75808 1086 aa17.95■□□□□ 0.46
LMNB2-201ENST00000325327 KRT1P04264 644 aa17.95■□□□□ 0.46
LMNB2-201ENST00000325327 HASPINQ8TF76 798 aa17.95■□□□□ 0.46
LMNB2-201ENST00000325327 TIPINQ9BVW5 301 aa17.95■□□□□ 0.46
LMNB2-201ENST00000325327 PCDHA13Q9Y5I0 950 aa17.95■□□□□ 0.46
LMNB2-201ENST00000325327 PSMA2P25787 234 aa17.94■□□□□ 0.46
LMNB2-201ENST00000325327 RARRES1P49788 294 aa17.94■□□□□ 0.46
LMNB2-201ENST00000325327 CDC42EP1Q00587 391 aa17.94■□□□□ 0.46
LMNB2-201ENST00000325327 GCNAQ96QF7 691 aa17.94■□□□□ 0.46
LMNB2-201ENST00000325327 UBE4BO95155 1302 aa17.94■□□□□ 0.46
LMNB2-201ENST00000325327 SPRYD7Q5W111 196 aa17.94■□□□□ 0.46
LMNB2-201ENST00000325327 DHX40Q8IX18 779 aaKnown RBP17.94■□□□□ 0.46
LMNB2-201ENST00000325327 HSPH1Q92598 858 aa17.94■□□□□ 0.46
LMNB2-201ENST00000325327 PGBD4Q96DM1 585 aa17.94■□□□□ 0.46
LMNB2-201ENST00000325327 KCND2Q9NZV8 630 aa17.94■□□□□ 0.46
LMNB2-201ENST00000325327 CPSF3Q9UKF6 684 aaKnown RBP17.94■□□□□ 0.46
LMNB2-201ENST00000325327 FOXP2O15409 715 aa17.94■□□□□ 0.46
LMNB2-201ENST00000325327 SLITRK3O94933 977 aa17.94■□□□□ 0.46
LMNB2-201ENST00000325327 PRKAR2AP13861 404 aaKnown RBP17.94■□□□□ 0.46
LMNB2-201ENST00000325327 ARL4AP40617 200 aa17.94■□□□□ 0.46
LMNB2-201ENST00000325327 MRPS25P82663 173 aaKnown RBP17.94■□□□□ 0.46
LMNB2-201ENST00000325327 ENGASEQ8NFI3 743 aa17.94■□□□□ 0.46
LMNB2-201ENST00000325327 ATP8B4Q8TF62 1192 aa17.94■□□□□ 0.46
LMNB2-201ENST00000325327 CEP72Q9P209 647 aa17.94■□□□□ 0.46
LMNB2-201ENST00000325327 SLC12A6Q9UHW9 1150 aa17.94■□□□□ 0.46
LMNB2-201ENST00000325327 GRIK4Q16099 956 aa17.93■□□□□ 0.46
LMNB2-201ENST00000325327 ZNF560Q96MR9 790 aa17.93■□□□□ 0.46
LMNB2-201ENST00000325327 SIK2Q9H0K1 926 aa17.93■□□□□ 0.46
LMNB2-201ENST00000325327 RBP5P82980 135 aa17.93■□□□□ 0.46
LMNB2-201ENST00000325327 ATP11AP98196 1134 aa17.93■□□□□ 0.46
LMNB2-201ENST00000325327 Q4G0T1 1027 aa17.93■□□□□ 0.46
LMNB2-201ENST00000325327 CCDC60Q8IWA6 550 aaPredicted RBP17.93■□□□□ 0.46
LMNB2-201ENST00000325327 KCTD6Q8NC69 237 aa17.93■□□□□ 0.46
LMNB2-201ENST00000325327 VTA1Q9NP79 307 aa17.93■□□□□ 0.46
LMNB2-201ENST00000325327 RGPD2P0DJD1 1756 aa17.93■□□□□ 0.46
LMNB2-201ENST00000325327 ATP8B3O60423 1300 aa17.93■□□□□ 0.46
LMNB2-201ENST00000325327 PPFIA4O75335 1185 aa17.93■□□□□ 0.46
LMNB2-201ENST00000325327 TCP1P17987 556 aaKnown RBP17.93■□□□□ 0.46
LMNB2-201ENST00000325327 ITGB5P18084 799 aa17.93■□□□□ 0.46
LMNB2-201ENST00000325327 PSMC1P62191 440 aaKnown RBP17.93■□□□□ 0.46
LMNB2-201ENST00000325327 GIT2Q14161 759 aa17.93■□□□□ 0.46
LMNB2-201ENST00000325327 REPS2Q8NFH8 660 aa17.93■□□□□ 0.46
LMNB2-201ENST00000325327 PPP1R13BQ96KQ4 1090 aa17.93■□□□□ 0.46
LMNB2-201ENST00000325327 VPS37BQ9H9H4 285 aa17.93■□□□□ 0.46
LMNB2-201ENST00000325327 AGPAT3Q9NRZ7 376 aa17.93■□□□□ 0.46
LMNB2-201ENST00000325327 HPDP32754 393 aaPredicted RBP17.93■□□□□ 0.46
LMNB2-201ENST00000325327 BIRC2Q13490 618 aa17.93■□□□□ 0.46
LMNB2-201ENST00000325327 ZNF484Q5JVG2 852 aa17.93■□□□□ 0.46
LMNB2-201ENST00000325327 MICALL1Q8N3F8 863 aa17.93■□□□□ 0.46
LMNB2-201ENST00000325327 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.93■□□□□ 0.465e-7■■□□□ 13.8
LMNB2-201ENST00000325327 TRIM11Q96F44 468 aa17.93■□□□□ 0.46
LMNB2-201ENST00000325327 ABHD10Q9NUJ1 306 aa17.93■□□□□ 0.46
LMNB2-201ENST00000325327 ATP2C2O75185 946 aa17.92■□□□□ 0.46
LMNB2-201ENST00000325327 FMO5P49326 533 aa17.92■□□□□ 0.46
LMNB2-201ENST00000325327 PDZD4Q76G19 769 aaPredicted RBP17.92■□□□□ 0.46
LMNB2-201ENST00000325327 KCNK18Q7Z418 384 aa17.92■□□□□ 0.46
LMNB2-201ENST00000325327 FRMD5Q7Z6J6 570 aa17.92■□□□□ 0.46
LMNB2-201ENST00000325327 SHCBP1Q8NEM2 672 aa17.92■□□□□ 0.46
LMNB2-201ENST00000325327 POP1Q99575 1024 aaKnown RBP17.92■□□□□ 0.46
LMNB2-201ENST00000325327 FEZ2Q9UHY8 353 aaPredicted RBP17.92■□□□□ 0.46
LMNB2-201ENST00000325327 RGPD5Q99666 1765 aa17.92■□□□□ 0.46
LMNB2-201ENST00000325327 FTLP02792 175 aaPredicted RBP17.92■□□□□ 0.46
LMNB2-201ENST00000325327 MAP2K5Q13163 448 aa17.92■□□□□ 0.46
LMNB2-201ENST00000325327 IFT20Q8IY31 132 aa17.92■□□□□ 0.46
LMNB2-201ENST00000325327 FBXL16Q8N461 479 aa17.92■□□□□ 0.46
LMNB2-201ENST00000325327 SLC30A5Q8TAD4 765 aa17.92■□□□□ 0.46
LMNB2-201ENST00000325327 HEMGNQ9BXL5 484 aa17.92■□□□□ 0.46
LMNB2-201ENST00000325327 TRAPPC3O43617 180 aa17.92■□□□□ 0.46
LMNB2-201ENST00000325327 ZMYND10O75800 440 aa17.92■□□□□ 0.46
LMNB2-201ENST00000325327 HLA-DRAP01903 254 aa17.92■□□□□ 0.46
LMNB2-201ENST00000325327 LCP1P13796 627 aa17.92■□□□□ 0.46
LMNB2-201ENST00000325327 SF3A3Q12874 501 aaKnown RBP eCLIP17.92■□□□□ 0.462e-8■■■□□ 15.6
LMNB2-201ENST00000325327 ORC1Q13415 861 aa17.92■□□□□ 0.46
LMNB2-201ENST00000325327 PLCB4Q15147 1175 aa17.92■□□□□ 0.46
LMNB2-201ENST00000325327 ATRIPQ8WXE1 791 aa17.92■□□□□ 0.46
LMNB2-201ENST00000325327 SNCAIPQ9Y6H5 919 aa17.92■□□□□ 0.46
LMNB2-201ENST00000325327 PNMA6AP0CW24 399 aaPredicted RBP17.92■□□□□ 0.46
LMNB2-201ENST00000325327 TBXAS1P24557 533 aaPredicted RBP17.92■□□□□ 0.46
LMNB2-201ENST00000325327 C4orf19Q8IY42 314 aa17.92■□□□□ 0.46
LMNB2-201ENST00000325327 ELMO3Q96BJ8 720 aa17.92■□□□□ 0.46
LMNB2-201ENST00000325327 MAD1L1Q9Y6D9 718 aa17.92■□□□□ 0.46
LMNB2-201ENST00000325327 SGK1O00141 431 aa17.91■□□□□ 0.46
LMNB2-201ENST00000325327 NDC80O14777 642 aa17.91■□□□□ 0.46
LMNB2-201ENST00000325327 ERCC6LQ2NKX8 1250 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms