RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 C4BPBP20851 252 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 ARHGAP22Q7Z5H3 698 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 DTX3LQ8TDB6 740 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 ZIM3Q96PE6 472 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 RBM15Q96T37 977 aaKnown RBP eCLIP8.7□□□□□ -1.021e-13■□□□□ 9.9
APOB-201ENST00000233242 ZNF839A8K0R7 811 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 CYFIP1Q7L576 1253 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 RCOR2Q8IZ40 523 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 L1RE1Q9UN81 338 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 MAP3K15Q6ZN16 1313 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 IGSF1Q8N6C5 1336 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 NFKBIAP25963 317 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 PMS1P54277 932 aaKnown RBP8.69□□□□□ -1.02
APOB-201ENST00000233242 ATP2C1P98194 919 aaPredicted RBP8.69□□□□□ -1.02
APOB-201ENST00000233242 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.69□□□□□ -1.024e-12■□□□□ 9.8
APOB-201ENST00000233242 AS3MTQ9HBK9 375 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 SAMD9LQ8IVG5 1584 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 SUPT3HO75486 399 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 FTLP02792 175 aaPredicted RBP8.69□□□□□ -1.02
APOB-201ENST00000233242 KITP10721 976 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 DDX5P17844 614 aaKnown RBP8.69□□□□□ -1.02
APOB-201ENST00000233242 CDC27P30260 824 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 TFAMQ00059 246 aaKnown RBP8.69□□□□□ -1.02
APOB-201ENST00000233242 SHC4Q6S5L8 630 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 USP38Q8NB14 1042 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 HPS3Q969F9 1004 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 ERP44Q9BS26 406 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 VPS11Q9H270 941 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 ADNPQ9H2P0 1102 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 KIF1BO60333 1816 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 TRIM49BA6NDI0 452 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 PIGSQ96S52 555 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 RBM12Q9NTZ6 932 aaKnown RBP8.69□□□□□ -1.02
APOB-201ENST00000233242 ADGRL3Q9HAR2 1447 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 SRRM3A6NNA2 597 aaPredicted RBP8.69□□□□□ -1.02
APOB-201ENST00000233242 EFCAB14O75071 495 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 COPAP53621 1224 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 TRMT5Q32P41 509 aaKnown RBP8.69□□□□□ -1.02
APOB-201ENST00000233242 CEP95Q96GE4 821 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 SUGCTQ9HAC7 445 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 WDR17Q8IZU2 1322 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 GNAT1P11488 350 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 TYK2P29597 1187 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 CHRNDQ07001 517 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 BTNL9Q6UXG8 535 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 OPTNQ96CV9 577 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 PARVBQ9HBI1 364 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 NPHS2Q9NP85 383 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 ABCB5Q2M3G0 1257 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 GPR141Q7Z602 305 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 PIK3R5Q8WYR1 880 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 ZFRQ96KR1 1074 aaKnown RBP8.69□□□□□ -1.02
APOB-201ENST00000233242 CFAP74Q9C0B2 1584 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 FSBPO95073 299 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 ALAS1P13196 640 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 JAK3P52333 1124 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 UGP2Q16851 508 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 ZMYND8Q9ULU4 1186 aaPredicted RBP8.69□□□□□ -1.02
APOB-201ENST00000233242 LAMC1P11047 1609 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 CDC25AP30304 524 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 GYG1P46976 350 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 JAMLQ86YT9 394 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 PIGOQ8TEQ8 1089 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 AIFM3Q96NN9 605 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 AURKCQ9UQB9 309 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 ALDH18A1P54886 795 aaKnown RBP8.69□□□□□ -1.02
APOB-201ENST00000233242 RSRC2Q7L4I2 434 aaKnown RBP8.69□□□□□ -1.02
APOB-201ENST00000233242 FAM20AQ96MK3 541 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 RHBDL2Q9NX52 303 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 ORC4O43929 436 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 RTN2O75298 545 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 LLGL1Q15334 1064 aa8.69□□□□□ -1.02
APOB-201ENST00000233242 CDK17Q00537 523 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 TMC4Q7Z404 712 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 YTHDF3Q7Z739 585 aaKnown RBP8.68□□□□□ -1.02
APOB-201ENST00000233242 CAVIN3Q969G5 261 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 ACSBG1Q96GR2 724 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 ANO3Q9BYT9 981 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 TRIM45Q9H8W5 580 aaPredicted RBP8.68□□□□□ -1.02
APOB-201ENST00000233242 CD248Q9HCU0 757 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 SLC9A2Q9UBY0 812 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 GOLGA8IPA6NC78 632 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 PSAPP07602 524 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 MTF1Q14872 753 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 PUS7LQ9H0K6 701 aaKnown RBP8.68□□□□□ -1.02
APOB-201ENST00000233242 DHX36Q9H2U1 1008 aaKnown RBP8.68□□□□□ -1.02
APOB-201ENST00000233242 WASHC2DQ5SRD0 308 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 OR6B2Q6IFH4 312 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 APBB2Q92870 758 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 TRIM63Q969Q1 353 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 STMN3Q9NZ72 180 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 AIPL1Q9NZN9 384 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 LEMD3Q9Y2U8 911 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 NCOA3Q9Y6Q9 1424 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 KIF2BQ8N4N8 673 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 RAPGEF5Q92565 580 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 STK33Q9BYT3 514 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 UTP6Q9NYH9 597 aaKnown RBP8.68□□□□□ -1.02
APOB-201ENST00000233242 RASSF9O75901 435 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 KBTBD12Q3ZCT8 623 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms