RNA–Protein interactions for RNA: YPR110C

RPC40, Transcript of RNA polymerase subunit AC40, yeastyeast

Gene RPC40, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPC40YPR110C MRP21P38175 177 aa2.49□□□□□ -2.01
RPC40YPR110C RCK1P38622 512 aa2.49□□□□□ -2.01
RPC40YPR110C WSC4P38739 605 aa2.49□□□□□ -2.01
RPC40YPR110C FHL1P39521 936 aa2.49□□□□□ -2.01
RPC40YPR110C STB1P42845 420 aa2.49□□□□□ -2.01
RPC40YPR110C GCD14P46959 383 aaPredicted RBP2.49□□□□□ -2.01
RPC40YPR110C YGR018CP53211 109 aa2.49□□□□□ -2.01
RPC40YPR110C TPC1P53257 314 aa2.49□□□□□ -2.01
RPC40YPR110C BIO4P53630 237 aa2.49□□□□□ -2.01
RPC40YPR110C KTR6P54070 446 aa2.49□□□□□ -2.01
RPC40YPR110C RPL21AQ02753 160 aaKnown RBP2.49□□□□□ -2.01
RPC40YPR110C IRC4Q03036 179 aa2.49□□□□□ -2.01
RPC40YPR110C BCP1Q06338 283 aa2.49□□□□□ -2.01
RPC40YPR110C SIA1Q12212 622 aa2.49□□□□□ -2.01
RPC40YPR110C YPR1Q12458 312 aa2.49□□□□□ -2.01
RPC40YPR110C PSK1P31374 1356 aa2.49□□□□□ -2.01
RPC40YPR110C BCK1Q01389 1478 aa2.48□□□□□ -2.01
RPC40YPR110C ADH1P00330 348 aaKnown RBP2.48□□□□□ -2.01
RPC40YPR110C ASP3-2P0CX77 362 aa2.48□□□□□ -2.01
RPC40YPR110C ASP3-3P0CX78 362 aa2.48□□□□□ -2.01
RPC40YPR110C ASP3-4P0CX79 362 aa2.48□□□□□ -2.01
RPC40YPR110C ASP3-1P0CZ17 362 aa2.48□□□□□ -2.01
RPC40YPR110C DAL5P15365 543 aa2.48□□□□□ -2.01
RPC40YPR110C OM45P16547 393 aa2.48□□□□□ -2.01
RPC40YPR110C TIP20P33891 701 aa2.48□□□□□ -2.01
RPC40YPR110C DTR1P38125 572 aa2.48□□□□□ -2.01
RPC40YPR110C SMP1P38128 452 aa2.48□□□□□ -2.01
RPC40YPR110C YGL262WP53054 175 aa2.48□□□□□ -2.01
RPC40YPR110C PNC1P53184 216 aaKnown RBP2.48□□□□□ -2.01
RPC40YPR110C SED5Q01590 340 aa2.48□□□□□ -2.01
RPC40YPR110C MRX11Q03079 207 aa2.48□□□□□ -2.01
RPC40YPR110C PIN3Q06449 215 aa2.48□□□□□ -2.01
RPC40YPR110C YLR413WQ06689 675 aa2.48□□□□□ -2.01
RPC40YPR110C SRO7Q12038 1033 aa2.48□□□□□ -2.01
RPC40YPR110C YOL085CQ99345 113 aa2.48□□□□□ -2.01
RPC40YPR110C TY3B-IQ7LHG5 1498 aaKnown RBP2.47□□□□□ -2.01
RPC40YPR110C PUT4P15380 627 aa2.47□□□□□ -2.01
RPC40YPR110C BGL2P15703 313 aaKnown RBP2.47□□□□□ -2.01
RPC40YPR110C MEK1P24719 497 aaPredicted RBP2.47□□□□□ -2.01
RPC40YPR110C ZRT1P32804 376 aa2.47□□□□□ -2.01
RPC40YPR110C CBF5P33322 483 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
RPC40YPR110C YKL187CP34231 750 aa2.47□□□□□ -2.01
RPC40YPR110C GGC1P38988 300 aa2.47□□□□□ -2.01
RPC40YPR110C SEO1P39709 593 aa2.47□□□□□ -2.01
RPC40YPR110C MEP1P40260 492 aa2.47□□□□□ -2.01
RPC40YPR110C MPP10P47083 593 aaKnown RBP2.47□□□□□ -2.01
RPC40YPR110C VHS1Q03785 461 aa2.47□□□□□ -2.01
RPC40YPR110C SNX41Q04053 625 aa2.47□□□□□ -2.01
RPC40YPR110C YDR018CQ12185 396 aa2.47□□□□□ -2.01
RPC40YPR110C MHP1P43638 1398 aa2.47□□□□□ -2.01
RPC40YPR110C RPC40P07703 335 aaKnown RBP2.46□□□□□ -2.02
RPC40YPR110C GAL7P08431 366 aa2.46□□□□□ -2.02
RPC40YPR110C HPR1P17629 752 aaKnown RBP2.46□□□□□ -2.02
RPC40YPR110C EPT1P22140 391 aa2.46□□□□□ -2.02
RPC40YPR110C SPS19P32573 292 aaKnown RBP2.46□□□□□ -2.02
RPC40YPR110C PPQ1P32945 549 aa2.46□□□□□ -2.02
RPC40YPR110C MCH2P36032 473 aa2.46□□□□□ -2.02
RPC40YPR110C SOP4P39543 234 aaPredicted RBP2.46□□□□□ -2.02
RPC40YPR110C GTO1P48239 356 aa2.46□□□□□ -2.02
RPC40YPR110C SDS23P53172 527 aa2.46□□□□□ -2.02
RPC40YPR110C YNL260CP53846 198 aa2.46□□□□□ -2.02
RPC40YPR110C YPL080CQ02826 108 aa2.46□□□□□ -2.02
RPC40YPR110C YMR111CQ04461 462 aaPredicted RBP2.46□□□□□ -2.02
RPC40YPR110C PBP4Q07362 185 aaKnown RBP2.46□□□□□ -2.02
RPC40YPR110C MMT2Q08970 484 aa2.46□□□□□ -2.02
RPC40YPR110C APC9Q12107 265 aa2.46□□□□□ -2.02
RPC40YPR110C YPL245WQ12179 454 aaKnown RBP2.46□□□□□ -2.02
RPC40YPR110C KRE5P22023 1365 aa2.46□□□□□ -2.02
RPC40YPR110C YLR419WQ06698 1435 aaKnown RBP2.45□□□□□ -2.02
RPC40YPR110C STE2D6VTK4 431 aa2.45□□□□□ -2.02
RPC40YPR110C ATP6P00854 259 aa2.45□□□□□ -2.02
RPC40YPR110C SPS100P13130 326 aa2.45□□□□□ -2.02
RPC40YPR110C MID2P36027 376 aa2.45□□□□□ -2.02
RPC40YPR110C YKL070WP36087 169 aa2.45□□□□□ -2.02
RPC40YPR110C MRPS9P38120 278 aa2.45□□□□□ -2.02
RPC40YPR110C TAE1P38340 232 aa2.45□□□□□ -2.02
RPC40YPR110C PEX18P38855 283 aa2.45□□□□□ -2.02
RPC40YPR110C RTT105P40063 208 aa2.45□□□□□ -2.02
RPC40YPR110C DSE1P40077 573 aa2.45□□□□□ -2.02
RPC40YPR110C NRM1P53718 249 aa2.45□□□□□ -2.02
RPC40YPR110C YPL077CQ02831 240 aa2.45□□□□□ -2.02
RPC40YPR110C YLR446WQ06204 433 aa2.45□□□□□ -2.02
RPC40YPR110C MCH1Q07376 486 aa2.45□□□□□ -2.02
RPC40YPR110C BSC6Q08280 497 aa2.45□□□□□ -2.02
RPC40YPR110C UTP23Q12339 254 aaKnown RBP2.45□□□□□ -2.02
RPC40YPR110C RRP36Q12481 300 aaPredicted RBP2.45□□□□□ -2.02
RPC40YPR110C IZH4Q99393 312 aa2.45□□□□□ -2.02
RPC40YPR110C CFT1Q06632 1357 aaKnown RBP2.45□□□□□ -2.02
RPC40YPR110C RAD9P14737 1309 aa2.44□□□□□ -2.02
RPC40YPR110C CCH1P50077 2039 aa2.44□□□□□ -2.02
RPC40YPR110C MLP1Q02455 1875 aaKnown RBP2.44□□□□□ -2.02
RPC40YPR110C RPL31AP0C2H8 113 aaKnown RBP2.44□□□□□ -2.02
RPC40YPR110C GPI12P23797 304 aa2.44□□□□□ -2.02
RPC40YPR110C SWD2P36104 329 aaPredicted RBP2.44□□□□□ -2.02
RPC40YPR110C ECM34P38728 170 aa2.44□□□□□ -2.02
RPC40YPR110C PET8P38921 284 aa2.44□□□□□ -2.02
RPC40YPR110C RRT13P40042 185 aa2.44□□□□□ -2.02
RPC40YPR110C RRG9P40156 214 aa2.44□□□□□ -2.02
RPC40YPR110C SLM1P40485 686 aa2.44□□□□□ -2.02
RPC40YPR110C UBC13P52490 153 aa2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 109.6 ms