RNA–Protein interactions for RNA: YLR411W

CTR3, Transcript of High-affinity copper transporter of the plasma membrane, yeast

Gene CTR3, Length 726 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTR3	YLR411W	CAT2	P32796	670 aa	Known RBP	4.84	□□□□□ -1.63
CTR3	YLR411W	PDR3	P33200	976 aa		4.84	□□□□□ -1.63
CTR3	YLR411W	RSM22	P36056	628 aa		4.84	□□□□□ -1.63
CTR3	YLR411W	YBR056W	P38081	501 aa		4.84	□□□□□ -1.63
CTR3	YLR411W	DBP8	P38719	431 aa		4.84	□□□□□ -1.63
CTR3	YLR411W	TVP23	P38962	199 aa		4.84	□□□□□ -1.63
CTR3	YLR411W	PHO90	P39535	881 aa		4.84	□□□□□ -1.63
CTR3	YLR411W	SSU1	P41930	458 aa		4.84	□□□□□ -1.63
CTR3	YLR411W	YJR149W	P47177	404 aa		4.84	□□□□□ -1.63
CTR3	YLR411W	BIO3	P50277	480 aa		4.84	□□□□□ -1.63
CTR3	YLR411W	YGR015C	P53208	328 aa		4.84	□□□□□ -1.63
CTR3	YLR411W	YPL014W	Q02606	381 aa		4.84	□□□□□ -1.63
CTR3	YLR411W	GRX5	Q02784	150 aa		4.84	□□□□□ -1.63
CTR3	YLR411W	DML1	Q03652	475 aa		4.84	□□□□□ -1.63
CTR3	YLR411W	YMR087W	Q04299	284 aa		4.84	□□□□□ -1.63
CTR3	YLR411W	YPR114W	Q06107	315 aa		4.84	□□□□□ -1.63
CTR3	YLR411W	YLR126C	Q12288	251 aa		4.84	□□□□□ -1.63
CTR3	YLR411W	ECM29	P38737	1868 aa		4.83	□□□□□ -1.64
CTR3	YLR411W	GCN4	P03069	281 aa		4.83	□□□□□ -1.64
CTR3	YLR411W	PET54	P10834	293 aa		4.83	□□□□□ -1.64
CTR3	YLR411W	MGR1	P25573	417 aa		4.83	□□□□□ -1.64
CTR3	YLR411W	VMA8	P32610	256 aa	Known RBP	4.83	□□□□□ -1.64
CTR3	YLR411W	SDH3	P33421	198 aa		4.83	□□□□□ -1.64
CTR3	YLR411W	YND1	P40009	630 aa		4.83	□□□□□ -1.64
CTR3	YLR411W	SWM2	P40342	146 aa		4.83	□□□□□ -1.64
CTR3	YLR411W	RTS2	P40962	232 aa		4.83	□□□□□ -1.64
CTR3	YLR411W	YGR210C	P42942	411 aa		4.83	□□□□□ -1.64
CTR3	YLR411W	LSM1	P47017	172 aa	Known RBP	4.83	□□□□□ -1.64
CTR3	YLR411W	RRN9	P53437	365 aa		4.83	□□□□□ -1.64
CTR3	YLR411W	LSM7	P53905	115 aa	Known RBP	4.83	□□□□□ -1.64
CTR3	YLR411W	HXT11	P54862	567 aa		4.83	□□□□□ -1.64
CTR3	YLR411W	MET31	Q03081	177 aa		4.83	□□□□□ -1.64
CTR3	YLR411W	GPN3	Q06543	272 aa		4.83	□□□□□ -1.64
CTR3	YLR411W	PEX27	Q08580	376 aa		4.83	□□□□□ -1.64
CTR3	YLR411W	YPL245W	Q12179	454 aa	Known RBP	4.83	□□□□□ -1.64
CTR3	YLR411W	COX3	P00420	269 aa		4.82	□□□□□ -1.64
CTR3	YLR411W	CDC21	P06785	304 aa		4.82	□□□□□ -1.64
CTR3	YLR411W	DAL81	P21657	970 aa		4.82	□□□□□ -1.64
CTR3	YLR411W	GEX1	P25596	615 aa		4.82	□□□□□ -1.64
CTR3	YLR411W	KRE6	P32486	720 aa		4.82	□□□□□ -1.64
CTR3	YLR411W	PMT1	P33775	817 aa		4.82	□□□□□ -1.64
CTR3	YLR411W	TAF14	P35189	244 aa		4.82	□□□□□ -1.64
CTR3	YLR411W	MRPL3	P36516	390 aa		4.82	□□□□□ -1.64
CTR3	YLR411W	SIF2	P38262	535 aa		4.82	□□□□□ -1.64
CTR3	YLR411W	ANS1	P38832	159 aa		4.82	□□□□□ -1.64
CTR3	YLR411W	ELO1	P39540	310 aa		4.82	□□□□□ -1.64
CTR3	YLR411W	NDE1	P40215	560 aa		4.82	□□□□□ -1.64
CTR3	YLR411W	ERG10	P41338	398 aa	Known RBP	4.82	□□□□□ -1.64
CTR3	YLR411W	YFR018C	P43599	363 aa		4.82	□□□□□ -1.64
CTR3	YLR411W	ATG18	P43601	500 aa		4.82	□□□□□ -1.64
CTR3	YLR411W	YJR030C	P47101	745 aa		4.82	□□□□□ -1.64
CTR3	YLR411W	ECM27	P47144	725 aa		4.82	□□□□□ -1.64
CTR3	YLR411W	UBC12	P52491	188 aa		4.82	□□□□□ -1.64
CTR3	YLR411W	PKP2	P53170	491 aa		4.82	□□□□□ -1.64
CTR3	YLR411W	YGR266W	P53326	701 aa		4.82	□□□□□ -1.64
CTR3	YLR411W	PRM1	P53835	661 aa		4.82	□□□□□ -1.64
CTR3	YLR411W	DID2	P69771	204 aa		4.82	□□□□□ -1.64
CTR3	YLR411W	HER2	Q03557	464 aa		4.82	□□□□□ -1.64
CTR3	YLR411W	YMR130W	Q04223	302 aa		4.82	□□□□□ -1.64
CTR3	YLR411W	RSF1	Q05043	376 aa		4.82	□□□□□ -1.64
CTR3	YLR411W	RQC1	Q05468	723 aa	Known RBP	4.82	□□□□□ -1.64
CTR3	YLR411W	TEN1	Q07921	160 aa		4.82	□□□□□ -1.64
CTR3	YLR411W	YLR046C	Q12253	270 aa		4.82	□□□□□ -1.64
CTR3	YLR411W	FMP16	Q12497	93 aa		4.82	□□□□□ -1.64
CTR3	YLR411W	SPS2	P08459	502 aa		4.81	□□□□□ -1.64
CTR3	YLR411W	MER1	P16523	270 aa		4.81	□□□□□ -1.64
CTR3	YLR411W	PRE7	P23724	241 aa	Known RBP	4.81	□□□□□ -1.64
CTR3	YLR411W	VMA16	P23968	213 aa		4.81	□□□□□ -1.64
CTR3	YLR411W	ADH7	P25377	361 aa		4.81	□□□□□ -1.64
CTR3	YLR411W	AHC2	P25649	128 aa		4.81	□□□□□ -1.64
CTR3	YLR411W	CAM1	P29547	415 aa	Known RBP	4.81	□□□□□ -1.64
CTR3	YLR411W	ANR2	P36090	516 aa	Predicted RBP	4.81	□□□□□ -1.64
CTR3	YLR411W	MUM2	P38236	366 aa		4.81	□□□□□ -1.64
CTR3	YLR411W	YHR035W	P38769	630 aa		4.81	□□□□□ -1.64
CTR3	YLR411W	LSM5	P40089	93 aa	Known RBP	4.81	□□□□□ -1.64
CTR3	YLR411W	MMF1	P40185	145 aa	Known RBP	4.81	□□□□□ -1.64
CTR3	YLR411W	RPE1	P46969	238 aa		4.81	□□□□□ -1.64
CTR3	YLR411W	MNT4	P53745	580 aa		4.81	□□□□□ -1.64
CTR3	YLR411W	CWC25	P53854	179 aa	Known RBP	4.81	□□□□□ -1.64
CTR3	YLR411W	RRG7	Q08774	242 aa	Predicted RBP	4.81	□□□□□ -1.64
CTR3	YLR411W	FEX1	Q08913	375 aa		4.81	□□□□□ -1.64
CTR3	YLR411W	MDM32	Q12171	622 aa		4.81	□□□□□ -1.64
CTR3	YLR411W	YPR011C	Q12251	326 aa		4.81	□□□□□ -1.64
CTR3	YLR411W	RKM5	Q12367	367 aa		4.81	□□□□□ -1.64
CTR3	YLR411W	RRP12	Q12754	1228 aa	Known RBP	4.81	□□□□□ -1.64
CTR3	YLR411W	YHR213W-A	Q8TGT4	77 aa		4.81	□□□□□ -1.64
CTR3	YLR411W	SRN2	Q99176	213 aa		4.81	□□□□□ -1.64
CTR3	YLR411W	ARG80	P07249	177 aa		4.8	□□□□□ -1.64
CTR3	YLR411W	CPA1	P07258	411 aa	Known RBP	4.8	□□□□□ -1.64
CTR3	YLR411W	YGL041W-A	P0C5N3	154 aa		4.8	□□□□□ -1.64
CTR3	YLR411W	RED1	P14291	827 aa		4.8	□□□□□ -1.64
CTR3	YLR411W	GRX2	P17695	143 aa	Known RBP	4.8	□□□□□ -1.64
CTR3	YLR411W	HNM1	P19807	563 aa		4.8	□□□□□ -1.64
CTR3	YLR411W	PEX34	P25584	144 aa		4.8	□□□□□ -1.64
CTR3	YLR411W	HOM6	P31116	359 aa	Known RBP	4.8	□□□□□ -1.64
CTR3	YLR411W	SSO1	P32867	290 aa		4.8	□□□□□ -1.64
CTR3	YLR411W	JEN1	P36035	616 aa		4.8	□□□□□ -1.64
CTR3	YLR411W	SOL2	P37262	315 aa		4.8	□□□□□ -1.64
CTR3	YLR411W	STP2	P38704	541 aa		4.8	□□□□□ -1.64
CTR3	YLR411W	LRP1	P38801	184 aa	Known RBP	4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 30.3 ms