RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C FIT1Q04433 528 aa2.18□□□□□ -2.06
VPS13YLL040C YLR126CQ12288 251 aa2.18□□□□□ -2.06
VPS13YLL040C SAR1P20606 190 aaKnown RBP2.18□□□□□ -2.06
VPS13YLL040C KIN3P22209 435 aa2.18□□□□□ -2.06
VPS13YLL040C URE2P23202 354 aaKnown RBP2.18□□□□□ -2.06
VPS13YLL040C GPI12P23797 304 aa2.18□□□□□ -2.06
VPS13YLL040C MTH1P35198 433 aa2.18□□□□□ -2.06
VPS13YLL040C YAL037WP39728 267 aa2.18□□□□□ -2.06
VPS13YLL040C TOS2P50078 622 aa2.18□□□□□ -2.06
VPS13YLL040C EGD1Q02642 157 aaKnown RBP2.18□□□□□ -2.06
VPS13YLL040C SNX41Q04053 625 aa2.18□□□□□ -2.06
VPS13YLL040C RPN9Q04062 393 aaKnown RBP2.18□□□□□ -2.06
VPS13YLL040C HLR1Q04429 423 aa2.18□□□□□ -2.06
VPS13YLL040C SUT2Q12286 268 aa2.18□□□□□ -2.06
VPS13YLL040C BGL2P15703 313 aaKnown RBP2.18□□□□□ -2.06
VPS13YLL040C MRPS9P38120 278 aa2.18□□□□□ -2.06
VPS13YLL040C TIM17P39515 158 aa2.18□□□□□ -2.06
VPS13YLL040C QDR1P40475 563 aa2.18□□□□□ -2.06
VPS13YLL040C VOA1P53262 265 aa2.18□□□□□ -2.06
VPS13YLL040C YNR021WP53723 404 aaKnown RBP2.18□□□□□ -2.06
VPS13YLL040C YMR315WQ04869 349 aaKnown RBP2.18□□□□□ -2.06
VPS13YLL040C VID22Q05934 901 aa2.18□□□□□ -2.06
VPS13YLL040C YLR179CQ06252 201 aaKnown RBP2.18□□□□□ -2.06
VPS13YLL040C PLB3Q08108 686 aa2.18□□□□□ -2.06
VPS13YLL040C SKI7Q08491 747 aaPredicted RBP2.18□□□□□ -2.06
VPS13YLL040C YCR101CP25607 182 aa2.18□□□□□ -2.06
VPS13YLL040C PEX28P38848 579 aa2.18□□□□□ -2.06
VPS13YLL040C GIP2P40036 548 aa2.18□□□□□ -2.06
VPS13YLL040C RPN4Q03465 531 aa2.18□□□□□ -2.06
VPS13YLL040C YPL245WQ12179 454 aaKnown RBP2.18□□□□□ -2.06
VPS13YLL040C YOP1Q12402 180 aa2.18□□□□□ -2.06
VPS13YLL040C SAG1P20840 650 aa2.18□□□□□ -2.06
VPS13YLL040C MIR1P23641 311 aaKnown RBP2.18□□□□□ -2.06
VPS13YLL040C SRB6P32570 121 aa2.18□□□□□ -2.06
VPS13YLL040C MAC1P35192 417 aa2.18□□□□□ -2.06
VPS13YLL040C WSS1P38838 269 aa2.18□□□□□ -2.06
VPS13YLL040C OSW5P40219 148 aa2.18□□□□□ -2.06
VPS13YLL040C AVT7P40501 490 aa2.18□□□□□ -2.06
VPS13YLL040C RAD17P48581 401 aa2.18□□□□□ -2.06
VPS13YLL040C SLU7Q02775 382 aaKnown RBP2.18□□□□□ -2.06
VPS13YLL040C YPL113CQ02961 396 aa2.18□□□□□ -2.06
VPS13YLL040C NOC4Q06512 552 aaPredicted RBP2.18□□□□□ -2.06
VPS13YLL040C MCP1Q12106 302 aa2.18□□□□□ -2.06
VPS13YLL040C RRI1Q12468 440 aa2.18□□□□□ -2.06
VPS13YLL040C YOS9Q99220 542 aa2.18□□□□□ -2.06
VPS13YLL040C NUP1P20676 1076 aa2.17□□□□□ -2.06
VPS13YLL040C VMA16P23968 213 aa2.17□□□□□ -2.06
VPS13YLL040C MKK1P32490 508 aa2.17□□□□□ -2.06
VPS13YLL040C LAG1P38703 411 aa2.17□□□□□ -2.06
VPS13YLL040C TNA1P53322 534 aa2.17□□□□□ -2.06
VPS13YLL040C AAH1P53909 347 aa2.17□□□□□ -2.06
VPS13YLL040C TY1A-MR1Q04215 440 aa2.17□□□□□ -2.06
VPS13YLL040C AVO1Q08236 1176 aa2.17□□□□□ -2.06
VPS13YLL040C TY1A-BLQ12266 440 aa2.17□□□□□ -2.06
VPS13YLL040C SPS4P09937 338 aa2.17□□□□□ -2.06
VPS13YLL040C YPT7P32939 208 aa2.17□□□□□ -2.06
VPS13YLL040C COS9P36034 407 aa2.17□□□□□ -2.06
VPS13YLL040C TUL1P36096 758 aa2.17□□□□□ -2.06
VPS13YLL040C HTD2P38790 280 aaKnown RBP2.17□□□□□ -2.06
VPS13YLL040C PHO90P39535 881 aa2.17□□□□□ -2.06
VPS13YLL040C GIM4P40005 111 aaKnown RBP2.17□□□□□ -2.06
VPS13YLL040C MFB1Q04922 465 aa2.17□□□□□ -2.06
VPS13YLL040C MSN2P33748 704 aa2.17□□□□□ -2.06
VPS13YLL040C NEM1P38757 446 aa2.17□□□□□ -2.06
VPS13YLL040C RPP1P38786 293 aa2.17□□□□□ -2.06
VPS13YLL040C PAC2P39937 518 aa2.17□□□□□ -2.06
VPS13YLL040C ZIM17P42844 174 aa2.17□□□□□ -2.06
VPS13YLL040C COS12P53053 380 aa2.17□□□□□ -2.06
VPS13YLL040C MAK3Q03503 176 aa2.17□□□□□ -2.06
VPS13YLL040C SSY1Q03770 852 aa2.17□□□□□ -2.06
VPS13YLL040C COQ10Q08058 207 aa2.17□□□□□ -2.06
VPS13YLL040C COX19Q3E731 98 aa2.17□□□□□ -2.06
VPS13YLL040C FLP1P03870 423 aa2.17□□□□□ -2.06
VPS13YLL040C ART10P18634 518 aaKnown RBP2.17□□□□□ -2.06
VPS13YLL040C YCR007CP25354 239 aa2.17□□□□□ -2.06
VPS13YLL040C FPR2P32472 135 aa2.17□□□□□ -2.06
VPS13YLL040C ZTA1P38230 334 aaKnown RBP2.17□□□□□ -2.06
VPS13YLL040C MIT1P40002 666 aa2.17□□□□□ -2.06
VPS13YLL040C YIL166CP40445 542 aa2.17□□□□□ -2.06
VPS13YLL040C ERG25P53045 309 aa2.17□□□□□ -2.06
VPS13YLL040C YNR061CP53747 219 aa2.17□□□□□ -2.06
VPS13YLL040C ERP1Q05359 219 aaKnown RBP2.17□□□□□ -2.06
VPS13YLL040C RPS31P05759 152 aaKnown RBP2.17□□□□□ -2.06
VPS13YLL040C ERG20P08524 352 aaKnown RBP2.17□□□□□ -2.06
VPS13YLL040C RPS21AP0C0V8 87 aaKnown RBP2.17□□□□□ -2.06
VPS13YLL040C UBI4P0CG63 381 aaKnown RBP2.17□□□□□ -2.06
VPS13YLL040C RPL40AP0CH08 128 aaKnown RBP2.17□□□□□ -2.06
VPS13YLL040C RPL40BP0CH09 128 aaKnown RBP2.17□□□□□ -2.06
VPS13YLL040C CDC34P14682 295 aa2.17□□□□□ -2.06
VPS13YLL040C FUS3P16892 353 aaKnown RBP2.17□□□□□ -2.06
VPS13YLL040C YJR141WP47172 347 aaPredicted RBP2.17□□□□□ -2.06
VPS13YLL040C PNC1P53184 216 aaKnown RBP2.17□□□□□ -2.06
VPS13YLL040C REC102Q02721 264 aa2.17□□□□□ -2.06
VPS13YLL040C ELP4Q02884 456 aaKnown RBP2.17□□□□□ -2.06
VPS13YLL040C RPL17AP05740 184 aaKnown RBP2.17□□□□□ -2.06
VPS13YLL040C PEP4P07267 405 aaKnown RBP2.17□□□□□ -2.06
VPS13YLL040C NAM2P11325 894 aa2.17□□□□□ -2.06
VPS13YLL040C COQ8P27697 501 aa2.17□□□□□ -2.06
VPS13YLL040C YJU3P28321 313 aa2.17□□□□□ -2.06
VPS13YLL040C ELF1P36053 145 aa2.17□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 121.9 ms