RNA–Protein interactions for RNA: YHR150W

PEX28, Transcript of Peroxisomal integral membrane peroxin, yeastyeast

Gene PEX28, Length 1,740 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX28YHR150W CYK3Q07533 885 aa6.87□□□□□ -1.31
PEX28YHR150W FMP40Q08968 688 aaPredicted RBP6.87□□□□□ -1.31
PEX28YHR150W GLO4Q12320 285 aa6.87□□□□□ -1.31
PEX28YHR150W YOS9Q99220 542 aa6.87□□□□□ -1.31
PEX28YHR150W DET1Q99288 334 aaKnown RBP6.87□□□□□ -1.31
PEX28YHR150W AAC3P18238 307 aa6.87□□□□□ -1.31
PEX28YHR150W MAG1P22134 296 aaKnown RBP6.87□□□□□ -1.31
PEX28YHR150W RNQ1P25367 405 aa6.87□□□□□ -1.31
PEX28YHR150W PTR2P32901 601 aa6.87□□□□□ -1.31
PEX28YHR150W WSC4P38739 605 aa6.87□□□□□ -1.31
PEX28YHR150W OSH7P38755 437 aa6.87□□□□□ -1.31
PEX28YHR150W NAB3P38996 802 aaKnown RBP RIP-Chip data6.87□□□□□ -1.31not detected
PEX28YHR150W LTP1P40347 161 aa6.87□□□□□ -1.31
PEX28YHR150W ALK1P43633 760 aaKnown RBP6.87□□□□□ -1.31
PEX28YHR150W IDS2P46958 469 aa6.87□□□□□ -1.31
PEX28YHR150W SFH5P47008 294 aa6.87□□□□□ -1.31
PEX28YHR150W SUN4P53616 420 aa6.87□□□□□ -1.31
PEX28YHR150W SIZ1Q04195 904 aa6.87□□□□□ -1.31
PEX28YHR150W UTP15Q04305 513 aaKnown RBP6.87□□□□□ -1.31
PEX28YHR150W SEC13Q04491 297 aaKnown RBP6.87□□□□□ -1.31
PEX28YHR150W GAS2Q06135 555 aa6.87□□□□□ -1.31
PEX28YHR150W YLR352WQ06479 807 aa6.87□□□□□ -1.31
PEX28YHR150W GUP2Q08929 609 aa6.87□□□□□ -1.31
PEX28YHR150W SKM1Q12469 655 aa6.87□□□□□ -1.31
PEX28YHR150W PSF1Q12488 208 aa6.87□□□□□ -1.31
PEX28YHR150W ARG80P07249 177 aa6.86□□□□□ -1.31
PEX28YHR150W RPL3P14126 387 aaKnown RBP6.86□□□□□ -1.31
PEX28YHR150W ERG4P25340 473 aa6.86□□□□□ -1.31
PEX28YHR150W FUN19P28003 413 aaPredicted RBP6.86□□□□□ -1.31
PEX28YHR150W ERG24P32462 438 aaKnown RBP6.86□□□□□ -1.31
PEX28YHR150W VMA8P32610 256 aaKnown RBP6.86□□□□□ -1.31
PEX28YHR150W SFK1P35735 353 aa6.86□□□□□ -1.31
PEX28YHR150W BET3P36149 193 aa6.86□□□□□ -1.31
PEX28YHR150W PHO90P39535 881 aa6.86□□□□□ -1.31
PEX28YHR150W PRP39P39682 629 aaKnown RBP6.86□□□□□ -1.31
PEX28YHR150W YER184CP39961 794 aa6.86□□□□□ -1.31
PEX28YHR150W YIL166CP40445 542 aa6.86□□□□□ -1.31
PEX28YHR150W HIS6P40545 261 aa6.86□□□□□ -1.31
PEX28YHR150W YPS6P40583 537 aa6.86□□□□□ -1.31
PEX28YHR150W LEM3P42838 414 aa6.86□□□□□ -1.31
PEX28YHR150W LSM1P47017 172 aaKnown RBP6.86□□□□□ -1.31
PEX28YHR150W YNR062CP53748 327 aa6.86□□□□□ -1.31
PEX28YHR150W HXT11P54862 567 aa6.86□□□□□ -1.31
PEX28YHR150W SPC19Q03954 165 aa6.86□□□□□ -1.31
PEX28YHR150W SNO4Q04902 237 aa6.86□□□□□ -1.31
PEX28YHR150W YML053CQ04978 212 aa6.86□□□□□ -1.31
PEX28YHR150W DCR2Q05924 578 aa6.86□□□□□ -1.31
PEX28YHR150W SNT309Q06091 175 aaPredicted RBP6.86□□□□□ -1.31
PEX28YHR150W BRX1Q08235 291 aaKnown RBP6.86□□□□□ -1.31
PEX28YHR150W HSP33Q08914 237 aaKnown RBP6.86□□□□□ -1.31
PEX28YHR150W HSP32Q08992 237 aa6.86□□□□□ -1.31
PEX28YHR150W AEP3Q12089 606 aa6.86□□□□□ -1.31
PEX28YHR150W PRE2P30656 287 aaKnown RBP6.85□□□□□ -1.31
PEX28YHR150W SRY1P36007 326 aa6.85□□□□□ -1.31
PEX28YHR150W MRPL36P36531 177 aa6.85□□□□□ -1.31
PEX28YHR150W TRR2P38816 342 aa6.85□□□□□ -1.31
PEX28YHR150W YMR144WP40214 342 aaKnown RBP6.85□□□□□ -1.31
PEX28YHR150W SMK1P41808 388 aa6.85□□□□□ -1.31
PEX28YHR150W VHT1P53241 593 aa6.85□□□□□ -1.31
PEX28YHR150W TIM44Q01852 431 aa6.85□□□□□ -1.31
PEX28YHR150W KAP120Q02932 1032 aa6.85□□□□□ -1.31
PEX28YHR150W TY1A-DR2Q03964 440 aaKnown RBP6.85□□□□□ -1.31
PEX28YHR150W TY1A-MR1Q04215 440 aa6.85□□□□□ -1.31
PEX28YHR150W TY1A-BLQ12266 440 aa6.85□□□□□ -1.31
PEX28YHR150W COX9P07255 59 aa6.84□□□□□ -1.31
PEX28YHR150W PRB1P09232 635 aa6.84□□□□□ -1.31
PEX28YHR150W CNE1P27825 502 aa6.84□□□□□ -1.31
PEX28YHR150W CAM1P29547 415 aaKnown RBP6.84□□□□□ -1.31
PEX28YHR150W TIM12P32830 109 aa6.84□□□□□ -1.31
PEX28YHR150W YOR062CP36025 268 aa6.84□□□□□ -1.31
PEX28YHR150W ANS1P38832 159 aa6.84□□□□□ -1.31
PEX28YHR150W YGL235WP53071 178 aa6.84□□□□□ -1.31
PEX28YHR150W INN1P53901 409 aa6.84□□□□□ -1.31
PEX28YHR150W SSY1Q03770 852 aa6.84□□□□□ -1.31
PEX28YHR150W PEX30Q06169 523 aa6.84□□□□□ -1.31
PEX28YHR150W YPR091CQ06833 770 aa6.84□□□□□ -1.31
PEX28YHR150W AIM6Q07716 390 aa6.84□□□□□ -1.31
PEX28YHR150W YEH1Q07804 573 aa6.84□□□□□ -1.31
PEX28YHR150W RSC58Q07979 502 aa6.84□□□□□ -1.31
PEX28YHR150W YOR365CQ08844 703 aa6.84□□□□□ -1.31
PEX28YHR150W RTC5Q12108 567 aaKnown RBP6.84□□□□□ -1.31
PEX28YHR150W ATP16Q12165 160 aa6.84□□□□□ -1.31
PEX28YHR150W DFG16Q99234 619 aa6.84□□□□□ -1.31
PEX28YHR150W SNF5P18480 905 aa6.84□□□□□ -1.31
PEX28YHR150W GPI12P23797 304 aa6.84□□□□□ -1.31
PEX28YHR150W PBN1P25580 416 aa6.84□□□□□ -1.31
PEX28YHR150W YCR061WP25639 631 aa6.84□□□□□ -1.31
PEX28YHR150W CWP1P28319 239 aa6.84□□□□□ -1.31
PEX28YHR150W PPG1P32838 368 aa6.84□□□□□ -1.31
PEX28YHR150W GIP2P40036 548 aa6.84□□□□□ -1.31
PEX28YHR150W ALB1P47019 175 aaPredicted RBP6.84□□□□□ -1.31
PEX28YHR150W UBX6P47049 396 aa6.84□□□□□ -1.31
PEX28YHR150W YGR042WP53227 271 aa6.84□□□□□ -1.31
PEX28YHR150W FMP48P53233 369 aa6.84□□□□□ -1.31
PEX28YHR150W TPC1P53257 314 aa6.84□□□□□ -1.31
PEX28YHR150W YDR249CQ03787 373 aa6.84□□□□□ -1.31
PEX28YHR150W BNA5Q05979 453 aa6.84□□□□□ -1.31
PEX28YHR150W YHR213W-AQ8TGT4 77 aa6.84□□□□□ -1.31
PEX28YHR150W FSH3Q99369 266 aa6.84□□□□□ -1.31
PEX28YHR150W GAL4P04386 881 aa6.83□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 97.3 ms