RNA–Protein interactions for RNA: YGR195W

SKI6, Transcript of Exosome non-catalytic core component, yeast

Gene SKI6, Length 741 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKI6	YGR195W	SNA3	P14359	133 aa		4.65	□□□□□ -1.67
SKI6	YGR195W	RFA3	P26755	122 aa	Known RBP	4.65	□□□□□ -1.67
SKI6	YGR195W	GEP4	P38812	185 aa		4.65	□□□□□ -1.67
SKI6	YGR195W	PCI8	P40512	444 aa		4.65	□□□□□ -1.67
SKI6	YGR195W	YJR012C	P47087	207 aa		4.65	□□□□□ -1.67
SKI6	YGR195W	YJR149W	P47177	404 aa		4.65	□□□□□ -1.67
SKI6	YGR195W	HCH1	P53834	153 aa		4.65	□□□□□ -1.67
SKI6	YGR195W	CTF19	Q02732	369 aa		4.65	□□□□□ -1.67
SKI6	YGR195W	CTL1	Q03220	320 aa	Known RBP	4.65	□□□□□ -1.67
SKI6	YGR195W	DIC1	Q06143	298 aa		4.65	□□□□□ -1.67
SKI6	YGR195W	SEC10	Q06245	871 aa		4.65	□□□□□ -1.67
SKI6	YGR195W	TMS1	Q12116	473 aa		4.65	□□□□□ -1.67
SKI6	YGR195W	TPT1	Q12272	230 aa	Known RBP	4.65	□□□□□ -1.67
SKI6	YGR195W	RRP42	Q12277	265 aa	Predicted RBP	4.65	□□□□□ -1.67
SKI6	YGR195W	JLP1	Q12358	412 aa		4.65	□□□□□ -1.67
SKI6	YGR195W	YCL012C	Q8J0M4	134 aa		4.65	□□□□□ -1.67
SKI6	YGR195W	IRC20	Q06554	1556 aa		4.65	□□□□□ -1.67
SKI6	YGR195W	NUP159	P40477	1460 aa		4.64	□□□□□ -1.67
SKI6	YGR195W	PDR5	P33302	1511 aa	Known RBP	4.64	□□□□□ -1.67
SKI6	YGR195W	RPL28	P02406	149 aa	Known RBP	4.64	□□□□□ -1.67
SKI6	YGR195W	RPL31A	P0C2H8	113 aa	Known RBP	4.64	□□□□□ -1.67
SKI6	YGR195W	NAM2	P11325	894 aa		4.64	□□□□□ -1.67
SKI6	YGR195W	YCR100C	P25606	316 aa		4.64	□□□□□ -1.67
SKI6	YGR195W	VPH2	P32341	215 aa		4.64	□□□□□ -1.67
SKI6	YGR195W	YEF1	P32622	495 aa		4.64	□□□□□ -1.67
SKI6	YGR195W	ECM15	P35195	104 aa		4.64	□□□□□ -1.67
SKI6	YGR195W	DRE2	P36152	348 aa		4.64	□□□□□ -1.67
SKI6	YGR195W	YHK8	P38776	514 aa		4.64	□□□□□ -1.67
SKI6	YGR195W	YPT35	P38815	214 aa	Known RBP	4.64	□□□□□ -1.67
SKI6	YGR195W	VAB2	P40003	282 aa		4.64	□□□□□ -1.67
SKI6	YGR195W	YIR016W	P40572	265 aa		4.64	□□□□□ -1.67
SKI6	YGR195W	YJR030C	P47101	745 aa		4.64	□□□□□ -1.67
SKI6	YGR195W	TIS11	P47977	285 aa		4.64	□□□□□ -1.67
SKI6	YGR195W	SWC4	P53201	476 aa		4.64	□□□□□ -1.67
SKI6	YGR195W	YIP3	P53633	176 aa		4.64	□□□□□ -1.67
SKI6	YGR195W	YNR048W	P53740	393 aa		4.64	□□□□□ -1.67
SKI6	YGR195W	ECM11	Q04110	302 aa		4.64	□□□□□ -1.67
SKI6	YGR195W	MUM3	Q08750	479 aa		4.64	□□□□□ -1.67
SKI6	YGR195W	PFA4	Q12006	378 aa		4.64	□□□□□ -1.67
SKI6	YGR195W	ARP6	Q12509	438 aa		4.64	□□□□□ -1.67
SKI6	YGR195W	DET1	Q99288	334 aa	Known RBP	4.64	□□□□□ -1.67
SKI6	YGR195W	DNF1	P32660	1571 aa		4.64	□□□□□ -1.67
SKI6	YGR195W	RPS2	P25443	254 aa	Known RBP	4.63	□□□□□ -1.67
SKI6	YGR195W	RPL16B	P26785	198 aa	Known RBP	4.63	□□□□□ -1.67
SKI6	YGR195W	BMH1	P29311	267 aa	Known RBP	4.63	□□□□□ -1.67
SKI6	YGR195W	CDC13	P32797	924 aa	Known RBP	4.63	□□□□□ -1.67
SKI6	YGR195W	LOS1	P33418	1100 aa	Predicted RBP	4.63	□□□□□ -1.67
SKI6	YGR195W	ASK1	P35734	292 aa		4.63	□□□□□ -1.67
SKI6	YGR195W	FRE2	P36033	711 aa		4.63	□□□□□ -1.67
SKI6	YGR195W	SRP102	P36057	244 aa	Predicted RBP	4.63	□□□□□ -1.67
SKI6	YGR195W	SOK1	P40317	901 aa		4.63	□□□□□ -1.67
SKI6	YGR195W	CSM2	P40465	213 aa		4.63	□□□□□ -1.67
SKI6	YGR195W	GAB1	P41733	394 aa		4.63	□□□□□ -1.67
SKI6	YGR195W	YFL040W	P43562	540 aa		4.63	□□□□□ -1.67
SKI6	YGR195W	MIC26	P50087	233 aa		4.63	□□□□□ -1.67
SKI6	YGR195W	MRM2	P53123	320 aa		4.63	□□□□□ -1.67
SKI6	YGR195W	YGL082W	P53155	381 aa		4.63	□□□□□ -1.67
SKI6	YGR195W	MHR1	Q06630	226 aa		4.63	□□□□□ -1.67
SKI6	YGR195W	SNU23	Q12368	194 aa	Predicted RBP	4.63	□□□□□ -1.67
SKI6	YGR195W	GEA2	P39993	1459 aa	Known RBP	4.62	□□□□□ -1.67
SKI6	YGR195W	GCN2	P15442	1659 aa		4.62	□□□□□ -1.67
SKI6	YGR195W	AMD1	P15274	810 aa	Known RBP	4.62	□□□□□ -1.67
SKI6	YGR195W	MEI4	P29467	408 aa		4.62	□□□□□ -1.67
SKI6	YGR195W	KAR9	P32526	644 aa		4.62	□□□□□ -1.67
SKI6	YGR195W	TIR2	P33890	251 aa		4.62	□□□□□ -1.67
SKI6	YGR195W	YOX1	P34161	385 aa		4.62	□□□□□ -1.67
SKI6	YGR195W	PHD1	P36093	366 aa		4.62	□□□□□ -1.67
SKI6	YGR195W	BMT2	P38278	337 aa		4.62	□□□□□ -1.67
SKI6	YGR195W	OSH3	P38713	996 aa	Known RBP	4.62	□□□□□ -1.67
SKI6	YGR195W	FLO5	P38894	1075 aa		4.62	□□□□□ -1.67
SKI6	YGR195W	GIM4	P40005	111 aa	Known RBP	4.62	□□□□□ -1.67
SKI6	YGR195W	YCH1	P42937	148 aa		4.62	□□□□□ -1.67
SKI6	YGR195W	ADO1	P47143	340 aa	Known RBP	4.62	□□□□□ -1.67
SKI6	YGR195W	NBP1	P52919	319 aa	Predicted RBP	4.62	□□□□□ -1.67
SKI6	YGR195W	USE1	P53146	245 aa		4.62	□□□□□ -1.67
SKI6	YGR195W	MST27	P53176	234 aa		4.62	□□□□□ -1.67
SKI6	YGR195W	SCW4	P53334	386 aa	Known RBP	4.62	□□□□□ -1.67
SKI6	YGR195W	RPL15B	P54780	204 aa	Predicted RBP	4.62	□□□□□ -1.67
SKI6	YGR195W	NUP100	Q02629	959 aa		4.62	□□□□□ -1.67
SKI6	YGR195W	TIM18	Q08749	192 aa		4.62	□□□□□ -1.67
SKI6	YGR195W	UTP23	Q12339	254 aa	Known RBP	4.62	□□□□□ -1.67
SKI6	YGR195W	DCN1	Q12395	269 aa		4.62	□□□□□ -1.67
SKI6	YGR195W	CDC25	P04821	1589 aa		4.61	□□□□□ -1.67
SKI6	YGR195W	TY1B-JR2	P47100	1755 aa	Known RBP	4.61	□□□□□ -1.67
SKI6	YGR195W	TY1B-ER2	Q03619	1755 aa		4.61	□□□□□ -1.67
SKI6	YGR195W	TY1B-MR1	Q04214	1755 aa		4.61	□□□□□ -1.67
SKI6	YGR195W	TY1B-MR2	Q04670	1755 aa	Known RBP	4.61	□□□□□ -1.67
SKI6	YGR195W	TY1B-LR1	Q12088	1755 aa	Known RBP	4.61	□□□□□ -1.67
SKI6	YGR195W	TY1B-NL1	Q12112	1755 aa		4.61	□□□□□ -1.67
SKI6	YGR195W	TY1B-GR1	Q12141	1755 aa		4.61	□□□□□ -1.67
SKI6	YGR195W	TY1B-BL	Q12490	1755 aa		4.61	□□□□□ -1.67
SKI6	YGR195W	AIM17	P23180	465 aa	Known RBP	4.61	□□□□□ -1.67
SKI6	YGR195W	POF1	P25576	258 aa		4.61	□□□□□ -1.67
SKI6	YGR195W	PRX1	P34227	261 aa	Known RBP	4.61	□□□□□ -1.67
SKI6	YGR195W	ECM8	P38246	354 aa		4.61	□□□□□ -1.67
SKI6	YGR195W	SHG1	P38337	142 aa		4.61	□□□□□ -1.67
SKI6	YGR195W	SEO1	P39709	593 aa		4.61	□□□□□ -1.67
SKI6	YGR195W	YER184C	P39961	794 aa		4.61	□□□□□ -1.67
SKI6	YGR195W	YER121W	P40076	114 aa		4.61	□□□□□ -1.67
SKI6	YGR195W	SIM1	P40472	476 aa		4.61	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 55.1 ms