RNA–Protein interactions for RNA: YEL041W

YEF1, Transcript of ATP-NADH kinase, yeast

Gene YEF1, Length 1,488 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YEF1	YEL041W	YAK1	P14680	807 aa		4.94	□□□□□ -1.62
YEF1	YEL041W	EXG1	P23776	448 aa	Known RBP	4.94	□□□□□ -1.62
YEF1	YEL041W	DAL2	P25335	343 aa		4.94	□□□□□ -1.62
YEF1	YEL041W	PUT3	P25502	979 aa	Predicted RBP	4.94	□□□□□ -1.62
YEF1	YEL041W	MXR2	P25566	168 aa		4.94	□□□□□ -1.62
YEF1	YEL041W	RAD23	P32628	398 aa	Known RBP	4.94	□□□□□ -1.62
YEF1	YEL041W	ECT1	P33412	323 aa		4.94	□□□□□ -1.62
YEF1	YEL041W	VPS51	P36116	164 aa		4.94	□□□□□ -1.62
YEF1	YEL041W	CHK1	P38147	527 aa		4.94	□□□□□ -1.62
YEF1	YEL041W	FHL1	P39521	936 aa		4.94	□□□□□ -1.62
YEF1	YEL041W	PRM9	P39551	298 aa		4.94	□□□□□ -1.62
YEF1	YEL041W	RFC4	P40339	323 aa	Known RBP	4.94	□□□□□ -1.62
YEF1	YEL041W	YMR226C	Q05016	267 aa	Known RBP	4.94	□□□□□ -1.62
YEF1	YEL041W	NNT1	Q05874	261 aa		4.94	□□□□□ -1.62
YEF1	YEL041W	BUR2	Q05949	395 aa		4.94	□□□□□ -1.62
YEF1	YEL041W	SRO7	Q12038	1033 aa		4.94	□□□□□ -1.62
YEF1	YEL041W	PAA1	Q12447	191 aa	Known RBP	4.94	□□□□□ -1.62
YEF1	YEL041W	TDH2	P00358	332 aa	Known RBP	4.93	□□□□□ -1.62
YEF1	YEL041W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
YEF1	YEL041W	CDC33	P07260	213 aa	Known RBP	4.93	□□□□□ -1.62
YEF1	YEL041W	SSC1	P0CS90	654 aa	Known RBP	4.93	□□□□□ -1.62
YEF1	YEL041W	APA2	P22108	325 aa		4.93	□□□□□ -1.62
YEF1	YEL041W	PPA2	P28239	310 aa		4.93	□□□□□ -1.62
YEF1	YEL041W	CWP1	P28319	239 aa		4.93	□□□□□ -1.62
YEF1	YEL041W	IMP3	P32899	183 aa	Predicted RBP	4.93	□□□□□ -1.62
YEF1	YEL041W	MRPL10	P36520	322 aa		4.93	□□□□□ -1.62
YEF1	YEL041W	YMR262W	P38430	313 aa		4.93	□□□□□ -1.62
YEF1	YEL041W	MET30	P39014	640 aa		4.93	□□□□□ -1.62
YEF1	YEL041W	CUS2	P53830	285 aa	Predicted RBP	4.93	□□□□□ -1.62
YEF1	YEL041W	NAT4	Q04751	285 aa		4.93	□□□□□ -1.62
YEF1	YEL041W	GRS2	Q06817	618 aa		4.93	□□□□□ -1.62
YEF1	YEL041W	SNA4	Q07549	140 aa		4.93	□□□□□ -1.62
YEF1	YEL041W	AYT1	Q12226	474 aa		4.93	□□□□□ -1.62
YEF1	YEL041W	ATG31	Q12421	196 aa		4.93	□□□□□ -1.62
YEF1	YEL041W	RAD3	P06839	778 aa		4.92	□□□□□ -1.62
YEF1	YEL041W	PBN1	P25580	416 aa		4.92	□□□□□ -1.62
YEF1	YEL041W	ZUO1	P32527	433 aa	Known RBP	4.92	□□□□□ -1.62
YEF1	YEL041W	MRPS5	P33759	307 aa		4.92	□□□□□ -1.62
YEF1	YEL041W	GEP4	P38812	185 aa		4.92	□□□□□ -1.62
YEF1	YEL041W	AVT2	P39981	480 aa		4.92	□□□□□ -1.62
YEF1	YEL041W	UTP25	P40498	721 aa	Known RBP	4.92	□□□□□ -1.62
YEF1	YEL041W	CDC40	P40968	455 aa	Predicted RBP	4.92	□□□□□ -1.62
YEF1	YEL041W	HIT1	P46973	164 aa		4.92	□□□□□ -1.62
YEF1	YEL041W	IBD2	P53892	351 aa		4.92	□□□□□ -1.62
YEF1	YEL041W	ENT5	Q03769	411 aa	Known RBP	4.92	□□□□□ -1.62
YEF1	YEL041W	ERP1	Q05359	219 aa	Known RBP	4.92	□□□□□ -1.62
YEF1	YEL041W	DDC1	Q08949	612 aa		4.92	□□□□□ -1.62
YEF1	YEL041W	RPS14A	P06367	137 aa	Known RBP	4.91	□□□□□ -1.62
YEF1	YEL041W	ZRC1	P20107	442 aa		4.91	□□□□□ -1.62
YEF1	YEL041W	DPB2	P24482	689 aa	Predicted RBP	4.91	□□□□□ -1.62
YEF1	YEL041W	YCR043C	P25361	127 aa		4.91	□□□□□ -1.62
YEF1	YEL041W	ATP7	P30902	174 aa		4.91	□□□□□ -1.62
YEF1	YEL041W	NAT2	P37293	288 aa		4.91	□□□□□ -1.62
YEF1	YEL041W	GPX2	P38143	162 aa		4.91	□□□□□ -1.62
YEF1	YEL041W	MIX23	P38162	196 aa		4.91	□□□□□ -1.62
YEF1	YEL041W	ATG12	P38316	186 aa		4.91	□□□□□ -1.62
YEF1	YEL041W	RPS14B	P39516	138 aa	Known RBP	4.91	□□□□□ -1.62
YEF1	YEL041W	YND1	P40009	630 aa		4.91	□□□□□ -1.62
YEF1	YEL041W	OST1	P41543	476 aa	Known RBP	4.91	□□□□□ -1.62
YEF1	YEL041W	TES1	P41903	349 aa	Known RBP	4.91	□□□□□ -1.62
YEF1	YEL041W	ARO80	Q04052	950 aa		4.91	□□□□□ -1.62
YEF1	YEL041W	NDE2	Q07500	545 aa		4.91	□□□□□ -1.62
YEF1	YEL041W	SET6	Q12529	373 aa		4.91	□□□□□ -1.62
YEF1	YEL041W	FAB1	P34756	2278 aa		4.9	□□□□□ -1.62
YEF1	YEL041W	RPL15A	P05748	204 aa	Known RBP	4.9	□□□□□ -1.62
YEF1	YEL041W	POL30	P15873	258 aa	Known RBP	4.9	□□□□□ -1.62
YEF1	YEL041W	ARF2	P19146	181 aa	Known RBP	4.9	□□□□□ -1.62
YEF1	YEL041W	UTR1	P21373	530 aa		4.9	□□□□□ -1.62
YEF1	YEL041W	YSR3	P23501	404 aa		4.9	□□□□□ -1.62
YEF1	YEL041W	RPL24B	P24000	155 aa	Known RBP	4.9	□□□□□ -1.62
YEF1	YEL041W	ECM13	P38195	257 aa		4.9	□□□□□ -1.62
YEF1	YEL041W	IML3	P38265	245 aa		4.9	□□□□□ -1.62
YEF1	YEL041W	MTC6	P38849	526 aa		4.9	□□□□□ -1.62
YEF1	YEL041W	CCT4	P39078	528 aa	Known RBP	4.9	□□□□□ -1.62
YEF1	YEL041W	JLP2	P40206	208 aa		4.9	□□□□□ -1.62
YEF1	YEL041W	RPR2	P40571	144 aa		4.9	□□□□□ -1.62
YEF1	YEL041W	YJL118W	P47022	219 aa		4.9	□□□□□ -1.62
YEF1	YEL041W	MIG2	P53035	382 aa		4.9	□□□□□ -1.62
YEF1	YEL041W	YGR168C	P53293	376 aa		4.9	□□□□□ -1.62
YEF1	YEL041W	TRM112	P53738	135 aa	Predicted RBP	4.9	□□□□□ -1.62
YEF1	YEL041W	IMP4	P53941	290 aa	Known RBP	4.9	□□□□□ -1.62
YEF1	YEL041W	COX20	Q04935	205 aa		4.9	□□□□□ -1.62
YEF1	YEL041W	TAF9	Q05027	157 aa		4.9	□□□□□ -1.62
YEF1	YEL041W	PAM18	Q07914	168 aa		4.9	□□□□□ -1.62
YEF1	YEL041W	YPR1	Q12458	312 aa		4.9	□□□□□ -1.62
YEF1	YEL041W	RAD7	P06779	565 aa		4.89	□□□□□ -1.63
YEF1	YEL041W	RPL27A	P0C2H6	136 aa	Known RBP	4.89	□□□□□ -1.63
YEF1	YEL041W	RPL27B	P0C2H7	136 aa	Known RBP	4.89	□□□□□ -1.63
YEF1	YEL041W	PHO13	P19881	312 aa		4.89	□□□□□ -1.63
YEF1	YEL041W	VMA5	P31412	392 aa	Known RBP	4.89	□□□□□ -1.63
YEF1	YEL041W	TIR2	P33890	251 aa		4.89	□□□□□ -1.63
YEF1	YEL041W	YPT52	P36018	234 aa	Known RBP	4.89	□□□□□ -1.63
YEF1	YEL041W	POP7	P38291	140 aa		4.89	□□□□□ -1.63
YEF1	YEL041W	MED6	P38782	295 aa		4.89	□□□□□ -1.63
YEF1	YEL041W	FET3	P38993	636 aa		4.89	□□□□□ -1.63
YEF1	YEL041W	SEC72	P39742	193 aa	Known RBP	4.89	□□□□□ -1.63
YEF1	YEL041W	YEL075C	P39972	122 aa		4.89	□□□□□ -1.63
YEF1	YEL041W	MRPL50	P53724	139 aa		4.89	□□□□□ -1.63
YEF1	YEL041W	GOR1	P53839	350 aa		4.89	□□□□□ -1.63
YEF1	YEL041W	DIA1	P54005	336 aa		4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 65.4 ms