RNA–Protein interactions for RNA: YBR254C

TRS20, Transcript of Core component of transport protein particle (TRAPP) complexes I-III, yeastyeast

Gene TRS20, Length 528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS20YBR254C MEK1P24719 497 aaPredicted RBP1.87□□□□□ -2.11
TRS20YBR254C INO2P26798 304 aa1.87□□□□□ -2.11
TRS20YBR254C YKL063CP35725 167 aa1.87□□□□□ -2.11
TRS20YBR254C YKL070WP36087 169 aa1.87□□□□□ -2.11
TRS20YBR254C TAE1P38340 232 aa1.87□□□□□ -2.11
TRS20YBR254C HIS2P38635 335 aa1.87□□□□□ -2.11
TRS20YBR254C DSE1P40077 573 aa1.87□□□□□ -2.11
TRS20YBR254C PMT4P46971 762 aa1.87□□□□□ -2.11
TRS20YBR254C EMC2P47133 292 aaKnown RBP1.87□□□□□ -2.11
TRS20YBR254C MND1P53102 219 aa1.87□□□□□ -2.11
TRS20YBR254C YPL077CQ02831 240 aa1.87□□□□□ -2.11
TRS20YBR254C SCS7Q03529 384 aa1.87□□□□□ -2.11
TRS20YBR254C VTI1Q04338 217 aa1.87□□□□□ -2.11
TRS20YBR254C YMR111CQ04461 462 aaPredicted RBP1.87□□□□□ -2.11
TRS20YBR254C GPN3Q06543 272 aa1.87□□□□□ -2.11
TRS20YBR254C MMT2Q08970 484 aa1.87□□□□□ -2.11
TRS20YBR254C YPL245WQ12179 454 aaKnown RBP1.87□□□□□ -2.11
TRS20YBR254C RRP42Q12277 265 aaPredicted RBP1.87□□□□□ -2.11
TRS20YBR254C CPT1P17898 393 aa1.86□□□□□ -2.11
TRS20YBR254C IFM1P25038 676 aa1.86□□□□□ -2.11
TRS20YBR254C RPL16BP26785 198 aaKnown RBP1.86□□□□□ -2.11
TRS20YBR254C MCH2P36032 473 aa1.86□□□□□ -2.11
TRS20YBR254C SWC4P53201 476 aa1.86□□□□□ -2.11
TRS20YBR254C BIO4P53630 237 aa1.86□□□□□ -2.11
TRS20YBR254C BER1Q06688 274 aaKnown RBP1.86□□□□□ -2.11
TRS20YBR254C TFC7Q12415 435 aa1.86□□□□□ -2.11
TRS20YBR254C SSA3P09435 649 aaKnown RBP1.85□□□□□ -2.11
TRS20YBR254C RPL31AP0C2H8 113 aaKnown RBP1.85□□□□□ -2.11
TRS20YBR254C MRPL20P22354 195 aaPredicted RBP1.85□□□□□ -2.11
TRS20YBR254C GPI12P23797 304 aa1.85□□□□□ -2.11
TRS20YBR254C YKL187CP34231 750 aa1.85□□□□□ -2.11
TRS20YBR254C RCK1P38622 512 aa1.85□□□□□ -2.11
TRS20YBR254C CTM1P38818 585 aa1.85□□□□□ -2.11
TRS20YBR254C SOP4P39543 234 aaPredicted RBP1.85□□□□□ -2.11
TRS20YBR254C AGP3P43548 558 aa1.85□□□□□ -2.11
TRS20YBR254C GCD14P46959 383 aaPredicted RBP1.85□□□□□ -2.11
TRS20YBR254C MRX5P47007 382 aa1.85□□□□□ -2.11
TRS20YBR254C YGL185CP53100 379 aa1.85□□□□□ -2.11
TRS20YBR254C SDS23P53172 527 aa1.85□□□□□ -2.11
TRS20YBR254C TPC1P53257 314 aa1.85□□□□□ -2.11
TRS20YBR254C SMD1Q02260 146 aaPredicted RBP1.85□□□□□ -2.11
TRS20YBR254C ASR1Q06834 288 aa1.85□□□□□ -2.11
TRS20YBR254C VIK1Q12045 647 aa1.85□□□□□ -2.11
TRS20YBR254C YDR018CQ12185 396 aa1.85□□□□□ -2.11
TRS20YBR254C TDH3P00359 332 aaKnown RBP RIP-Chip data1.84□□□□□ -2.11not detected
TRS20YBR254C ILV1P00927 576 aaKnown RBP1.84□□□□□ -2.11
TRS20YBR254C RPL24AP04449 155 aaKnown RBP1.84□□□□□ -2.11
TRS20YBR254C CUP2P15315 225 aa1.84□□□□□ -2.11
TRS20YBR254C RIB7P33312 244 aa1.84□□□□□ -2.11
TRS20YBR254C MRPL37P36532 105 aa1.84□□□□□ -2.11
TRS20YBR254C RFT1P38206 574 aaPredicted RBP1.84□□□□□ -2.11
TRS20YBR254C PET8P38921 284 aa1.84□□□□□ -2.11
TRS20YBR254C PET100P38958 111 aa1.84□□□□□ -2.11
TRS20YBR254C YIL054WP40524 105 aa1.84□□□□□ -2.11
TRS20YBR254C MIC19P43594 170 aa1.84□□□□□ -2.11
TRS20YBR254C FMP48P53233 369 aa1.84□□□□□ -2.11
TRS20YBR254C YNR066CP53752 436 aa1.84□□□□□ -2.11
TRS20YBR254C YNL050CP53952 270 aa1.84□□□□□ -2.11
TRS20YBR254C INP1Q03694 420 aa1.84□□□□□ -2.11
TRS20YBR254C UTP15Q04305 513 aaKnown RBP1.84□□□□□ -2.11
TRS20YBR254C YLR446WQ06204 433 aa1.84□□□□□ -2.11
TRS20YBR254C APC9Q12107 265 aa1.84□□□□□ -2.11
TRS20YBR254C YPR064WQ12492 139 aa1.84□□□□□ -2.11
TRS20YBR254C LAG2Q92325 660 aa1.84□□□□□ -2.11
TRS20YBR254C ATP6P00854 259 aa1.83□□□□□ -2.12
TRS20YBR254C YSR3P23501 404 aa1.83□□□□□ -2.12
TRS20YBR254C ALK2P32789 676 aaPredicted RBP1.83□□□□□ -2.12
TRS20YBR254C IMP3P32899 183 aaPredicted RBP1.83□□□□□ -2.12
TRS20YBR254C TKL2P33315 681 aa1.83□□□□□ -2.12
TRS20YBR254C YIA6P40556 373 aa1.83□□□□□ -2.12
TRS20YBR254C UBC13P52490 153 aa1.83□□□□□ -2.12
TRS20YBR254C LAP3Q01532 483 aaKnown RBP RIP-Chip data1.83□□□□□ -2.12not detected
TRS20YBR254C RRP36Q12481 300 aaPredicted RBP1.83□□□□□ -2.12
TRS20YBR254C FMP16Q12497 93 aa1.83□□□□□ -2.12
TRS20YBR254C TFS1P14306 219 aa1.82□□□□□ -2.12
TRS20YBR254C HPR1P17629 752 aaKnown RBP1.82□□□□□ -2.12
TRS20YBR254C VPS1P21576 704 aaKnown RBP1.82□□□□□ -2.12
TRS20YBR254C CDC13P32797 924 aaKnown RBP1.82□□□□□ -2.12
TRS20YBR254C MRPL6P32904 214 aa1.82□□□□□ -2.12
TRS20YBR254C RPC37P36121 282 aa1.82□□□□□ -2.12
TRS20YBR254C SCC4P40090 624 aa1.82□□□□□ -2.12
TRS20YBR254C SHQ1P40486 507 aaPredicted RBP1.82□□□□□ -2.12
TRS20YBR254C MPP10P47083 593 aaKnown RBP1.82□□□□□ -2.12
TRS20YBR254C CPD1P53314 239 aa1.82□□□□□ -2.12
TRS20YBR254C GMC1Q04399 608 aa1.82□□□□□ -2.12
TRS20YBR254C ARC18Q05933 178 aaKnown RBP1.82□□□□□ -2.12
TRS20YBR254C YOR292CQ08743 309 aa1.82□□□□□ -2.12
TRS20YBR254C POM33Q12164 279 aa1.82□□□□□ -2.12
TRS20YBR254C PRP46Q12417 451 aaPredicted RBP1.82□□□□□ -2.12
TRS20YBR254C FRS2P15625 503 aaKnown RBP1.81□□□□□ -2.12
TRS20YBR254C GCG1P32656 232 aaKnown RBP1.81□□□□□ -2.12
TRS20YBR254C ZRT3P34240 503 aa1.81□□□□□ -2.12
TRS20YBR254C YUH1P35127 236 aa1.81□□□□□ -2.12
TRS20YBR254C YPC1P38298 316 aa1.81□□□□□ -2.12
TRS20YBR254C ECM14P38836 430 aa1.81□□□□□ -2.12
TRS20YBR254C SLM1P40485 686 aa1.81□□□□□ -2.12
TRS20YBR254C GDS1P41913 522 aa1.81□□□□□ -2.12
TRS20YBR254C YPT32P51996 222 aaKnown RBP1.81□□□□□ -2.12
TRS20YBR254C YGL118CP53132 145 aa1.81□□□□□ -2.12
TRS20YBR254C MPP6P53725 186 aaPredicted RBP1.81□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 62.2 ms