RNA–Protein interactions for RNA: YBL067C

UBP13, Transcript of Ubiquitin-specific protease that cleaves Ub-protein fusions, yeast

Gene UBP13, Length 2,244 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP13	YBL067C	RPS28B	P0C0X0	67 aa	Known RBP	6.3	□□□□□ -1.4
UBP13	YBL067C	ZWF1	P11412	505 aa	Known RBP	6.3	□□□□□ -1.4
UBP13	YBL067C	CSG2	P35206	410 aa		6.3	□□□□□ -1.4
UBP13	YBL067C	YPC1	P38298	316 aa		6.3	□□□□□ -1.4
UBP13	YBL067C	CSM2	P40465	213 aa		6.3	□□□□□ -1.4
UBP13	YBL067C	OST3	P48439	350 aa		6.3	□□□□□ -1.4
UBP13	YBL067C	YGR151C	P53287	111 aa		6.3	□□□□□ -1.4
UBP13	YBL067C	COG5	P53951	403 aa		6.3	□□□□□ -1.4
UBP13	YBL067C	YPL077C	Q02831	240 aa		6.3	□□□□□ -1.4
UBP13	YBL067C	NOC4	Q06512	552 aa	Predicted RBP	6.3	□□□□□ -1.4
UBP13	YBL067C	YET3	Q07451	203 aa		6.3	□□□□□ -1.4
UBP13	YBL067C	YOR289W	Q12012	251 aa	Predicted RBP	6.3	□□□□□ -1.4
UBP13	YBL067C	TAF10	Q12030	206 aa		6.3	□□□□□ -1.4
UBP13	YBL067C	RPS28A	Q3E7X9	67 aa	Predicted RBP	6.3	□□□□□ -1.4
UBP13	YBL067C	SHG1	P38337	142 aa		6.3	□□□□□ -1.4
UBP13	YBL067C	PFA5	Q03289	374 aa		6.3	□□□□□ -1.4
UBP13	YBL067C	GAS2	Q06135	555 aa		6.3	□□□□□ -1.4
UBP13	YBL067C	TAZ1	Q06510	381 aa		6.3	□□□□□ -1.4
UBP13	YBL067C	YOR283W	Q12040	230 aa	Known RBP	6.3	□□□□□ -1.4
UBP13	YBL067C	YCT1	Q12235	531 aa		6.3	□□□□□ -1.4
UBP13	YBL067C	YKL033W-A	Q86ZR7	236 aa		6.3	□□□□□ -1.4
UBP13	YBL067C	RPL20A	P0CX23	172 aa	Known RBP	6.29	□□□□□ -1.4
UBP13	YBL067C	RPL20B	P0CX24	172 aa	Predicted RBP	6.29	□□□□□ -1.4
UBP13	YBL067C	YCR023C	P25351	611 aa		6.29	□□□□□ -1.4
UBP13	YBL067C	SRY1	P36007	326 aa		6.29	□□□□□ -1.4
UBP13	YBL067C	YHI9	P38765	294 aa		6.29	□□□□□ -1.4
UBP13	YBL067C	RTS2	P40962	232 aa		6.29	□□□□□ -1.4
UBP13	YBL067C	TRM9	P49957	279 aa		6.29	□□□□□ -1.4
UBP13	YBL067C	TOS8	P53147	276 aa		6.29	□□□□□ -1.4
UBP13	YBL067C	MST27	P53176	234 aa		6.29	□□□□□ -1.4
UBP13	YBL067C	YLR152C	P54072	576 aa		6.29	□□□□□ -1.4
UBP13	YBL067C	HCR1	Q05775	265 aa	Known RBP	6.29	□□□□□ -1.4
UBP13	YBL067C	TDA6	Q06466	467 aa		6.29	□□□□□ -1.4
UBP13	YBL067C	LOA1	Q06508	300 aa		6.29	□□□□□ -1.4
UBP13	YBL067C	YLL056C	Q12177	298 aa		6.29	□□□□□ -1.4
UBP13	YBL067C	RPL28	P02406	149 aa	Known RBP	6.29	□□□□□ -1.4
UBP13	YBL067C	AIM17	P23180	465 aa	Known RBP	6.29	□□□□□ -1.4
UBP13	YBL067C	CPR4	P25334	318 aa		6.29	□□□□□ -1.4
UBP13	YBL067C	BUL1	P48524	976 aa		6.29	□□□□□ -1.4
UBP13	YBL067C	NUP57	P48837	541 aa		6.29	□□□□□ -1.4
UBP13	YBL067C	DUG3	P53871	357 aa		6.29	□□□□□ -1.4
UBP13	YBL067C	YPL229W	Q99395	206 aa		6.29	□□□□□ -1.4
UBP13	YBL067C	YCR101C	P25607	182 aa		6.28	□□□□□ -1.4
UBP13	YBL067C	ACB1	P31787	87 aa		6.28	□□□□□ -1.4
UBP13	YBL067C	APE2	P32454	952 aa	Known RBP	6.28	□□□□□ -1.4
UBP13	YBL067C	YKL063C	P35725	167 aa		6.28	□□□□□ -1.4
UBP13	YBL067C	ERV46	P39727	415 aa		6.28	□□□□□ -1.4
UBP13	YBL067C	GAT1	P43574	510 aa		6.28	□□□□□ -1.4
UBP13	YBL067C	POP6	P53218	158 aa		6.28	□□□□□ -1.4
UBP13	YBL067C	IBD2	P53892	351 aa		6.28	□□□□□ -1.4
UBP13	YBL067C	TRM44	Q02648	567 aa	Known RBP	6.28	□□□□□ -1.4
UBP13	YBL067C	YDR209C	Q03480	137 aa		6.28	□□□□□ -1.4
UBP13	YBL067C	ENB1	Q08299	606 aa		6.28	□□□□□ -1.4
UBP13	YBL067C	UTP23	Q12339	254 aa	Known RBP	6.28	□□□□□ -1.4
UBP13	YBL067C	MTF1	P14908	341 aa	Known RBP	6.27	□□□□□ -1.4
UBP13	YBL067C	SAC1	P32368	623 aa	Known RBP	6.27	□□□□□ -1.4
UBP13	YBL067C	ZRT1	P32804	376 aa		6.27	□□□□□ -1.4
UBP13	YBL067C	SEN34	P39707	275 aa		6.27	□□□□□ -1.4
UBP13	YBL067C	FAU1	P40099	211 aa		6.27	□□□□□ -1.4
UBP13	YBL067C	IKS1	P47042	667 aa		6.27	□□□□□ -1.4
UBP13	YBL067C	CPR8	P53728	308 aa		6.27	□□□□□ -1.4
UBP13	YBL067C	RDI1	Q12434	202 aa		6.27	□□□□□ -1.4
UBP13	YBL067C	SNT2	P53127	1403 aa		6.27	□□□□□ -1.41
UBP13	YBL067C	RPS1A	P33442	255 aa	Known RBP	6.27	□□□□□ -1.41
UBP13	YBL067C	LST4	P34239	828 aa		6.27	□□□□□ -1.41
UBP13	YBL067C	GPX2	P38143	162 aa		6.27	□□□□□ -1.41
UBP13	YBL067C	YJL016W	P47072	561 aa		6.27	□□□□□ -1.41
UBP13	YBL067C	SCW11	P53189	542 aa		6.27	□□□□□ -1.41
UBP13	YBL067C	PCP1	P53259	346 aa		6.27	□□□□□ -1.41
UBP13	YBL067C	SMM1	P53720	384 aa	Known RBP	6.27	□□□□□ -1.41
UBP13	YBL067C	YLR031W	Q07978	186 aa		6.27	□□□□□ -1.41
UBP13	YBL067C	MED7	Q08278	222 aa		6.27	□□□□□ -1.41
UBP13	YBL067C	SRL2	Q12020	392 aa		6.27	□□□□□ -1.41
UBP13	YBL067C	AGC1	Q12482	902 aa		6.27	□□□□□ -1.41
UBP13	YBL067C	MEX67	Q99257	599 aa	Known RBP	6.27	□□□□□ -1.41
UBP13	YBL067C	SSC1	P0CS90	654 aa	Known RBP	6.26	□□□□□ -1.41
UBP13	YBL067C	HSP30	P25619	332 aa		6.26	□□□□□ -1.41
UBP13	YBL067C	MTC4	P38335	694 aa	Known RBP	6.26	□□□□□ -1.41
UBP13	YBL067C	GUF1	P46943	645 aa		6.26	□□□□□ -1.41
UBP13	YBL067C	YVH1	Q02256	364 aa	Known RBP	6.26	□□□□□ -1.41
UBP13	YBL067C	YPL014W	Q02606	381 aa		6.26	□□□□□ -1.41
UBP13	YBL067C	IRC15	Q02733	499 aa		6.26	□□□□□ -1.41
UBP13	YBL067C	DPP1	Q05521	289 aa		6.26	□□□□□ -1.41
UBP13	YBL067C	MMT2	Q08970	484 aa		6.26	□□□□□ -1.41
UBP13	YBL067C	ICT1	Q12385	394 aa		6.26	□□□□□ -1.41
UBP13	YBL067C	RIB3	Q99258	208 aa		6.26	□□□□□ -1.41
UBP13	YBL067C	Q0144	Q9ZZW2	109 aa		6.26	□□□□□ -1.41
UBP13	YBL067C	JEN1	P36035	616 aa		6.26	□□□□□ -1.41
UBP13	YBL067C	YBR137W	P38276	179 aa		6.26	□□□□□ -1.41
UBP13	YBL067C	SLM6	P38343	150 aa		6.26	□□□□□ -1.41
UBP13	YBL067C	SUL1	P38359	859 aa		6.26	□□□□□ -1.41
UBP13	YBL067C	NVJ1	P38881	321 aa		6.26	□□□□□ -1.41
UBP13	YBL067C	YFL015C	P43578	164 aa		6.26	□□□□□ -1.41
UBP13	YBL067C	ECL1	P48235	211 aa		6.26	□□□□□ -1.41
UBP13	YBL067C	USE1	P53146	245 aa		6.26	□□□□□ -1.41
UBP13	YBL067C	GTR2	P53290	341 aa		6.26	□□□□□ -1.41
UBP13	YBL067C	CTR3	Q06686	241 aa		6.26	□□□□□ -1.41
UBP13	YBL067C	COQ3	P27680	312 aa		6.25	□□□□□ -1.41
UBP13	YBL067C	ARO7	P32178	256 aa		6.25	□□□□□ -1.41
UBP13	YBL067C	CPR5	P35176	225 aa		6.25	□□□□□ -1.41

Retrieved 100 of 5,963 RNA–protein pairs in 138.9 ms