RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 ATP8B4Q8TF62 1192 aa15.74■□□□□ 0.11
SCARB2-221ENST00000640341 COL24A1Q17RW2 1714 aa15.74■□□□□ 0.11
SCARB2-221ENST00000640341 A0A0A6YYK5 440 aaPredicted RBP15.74■□□□□ 0.11
SCARB2-221ENST00000640341 ACSL3O95573 720 aa15.74■□□□□ 0.11
SCARB2-221ENST00000640341 MMEP08473 750 aa15.74■□□□□ 0.11
SCARB2-221ENST00000640341 SSTR3P32745 418 aaPredicted RBP15.74■□□□□ 0.11
SCARB2-221ENST00000640341 CIITAP33076 1130 aa15.74■□□□□ 0.11
SCARB2-221ENST00000640341 PEX3P56589 373 aa15.74■□□□□ 0.11
SCARB2-221ENST00000640341 PPP1R7Q15435 360 aa15.74■□□□□ 0.11
SCARB2-221ENST00000640341 MCTP2Q6DN12 878 aa15.74■□□□□ 0.11
SCARB2-221ENST00000640341 TATDN1Q6P1N9 297 aa15.74■□□□□ 0.11
SCARB2-221ENST00000640341 DYDC1Q8WWB3 177 aa15.74■□□□□ 0.11
SCARB2-221ENST00000640341 GMCL1Q96IK5 515 aa15.74■□□□□ 0.11
SCARB2-221ENST00000640341 AGBL1Q96MI9 1066 aa15.74■□□□□ 0.11
SCARB2-221ENST00000640341 TEKT3Q9BXF9 490 aa15.74■□□□□ 0.11
SCARB2-221ENST00000640341 WDR11Q9BZH6 1224 aa15.74■□□□□ 0.11
SCARB2-221ENST00000640341 HAUS2Q9NVX0 235 aa15.74■□□□□ 0.11
SCARB2-221ENST00000640341 ADAMTSL1Q8N6G6 1762 aa15.74■□□□□ 0.11
SCARB2-221ENST00000640341 EIF3DO15371 548 aaKnown RBP eCLIP15.74■□□□□ 0.11
SCARB2-221ENST00000640341 ZBTB48P10074 688 aaPredicted RBP15.74■□□□□ 0.11
SCARB2-221ENST00000640341 VAMP7P51809 220 aa15.74■□□□□ 0.11
SCARB2-221ENST00000640341 SEL1L2Q5TEA6 688 aa15.74■□□□□ 0.11
SCARB2-221ENST00000640341 SLC47A2Q86VL8 602 aa15.74■□□□□ 0.11
SCARB2-221ENST00000640341 NAP1L3Q99457 506 aaPredicted RBP15.74■□□□□ 0.11
SCARB2-221ENST00000640341 ARHGEF10LQ9HCE6 1279 aa15.74■□□□□ 0.11
SCARB2-221ENST00000640341 TUFT1Q9NNX1 390 aa15.74■□□□□ 0.11
SCARB2-221ENST00000640341 RASAL2Q9UJF2 1139 aa15.74■□□□□ 0.11
SCARB2-221ENST00000640341 PCNTO95613 3336 aa15.73■□□□□ 0.11
SCARB2-221ENST00000640341 GTPBP10A4D1E9 387 aaKnown RBP15.73■□□□□ 0.11
SCARB2-221ENST00000640341 DLATP10515 647 aaKnown RBP15.73■□□□□ 0.11
SCARB2-221ENST00000640341 DACT2Q5SW24 774 aa15.73■□□□□ 0.11
SCARB2-221ENST00000640341 DAB2IPQ5VWQ8 1189 aa15.73■□□□□ 0.11
SCARB2-221ENST00000640341 C1orf54Q8WWF1 131 aa15.73■□□□□ 0.11
SCARB2-221ENST00000640341 FIZ1Q96SL8 496 aa15.73■□□□□ 0.11
SCARB2-221ENST00000640341 CARD9Q9H257 536 aa15.73■□□□□ 0.11
SCARB2-221ENST00000640341 LARSQ9P2J5 1176 aaKnown RBP15.73■□□□□ 0.11
SCARB2-221ENST00000640341 RAD17O75943 681 aa15.73■□□□□ 0.11
SCARB2-221ENST00000640341 PYGMP11217 842 aa15.73■□□□□ 0.11
SCARB2-221ENST00000640341 KRT5P13647 590 aa15.73■□□□□ 0.11
SCARB2-221ENST00000640341 RPL21P46778 160 aaKnown RBP15.73■□□□□ 0.11
SCARB2-221ENST00000640341 PPATQ06203 517 aa15.73■□□□□ 0.11
SCARB2-221ENST00000640341 MAPK7Q13164 816 aa15.73■□□□□ 0.11
SCARB2-221ENST00000640341 RNF25Q96BH1 459 aaPredicted RBP15.73■□□□□ 0.11
SCARB2-221ENST00000640341 OSBPL7Q9BZF2 842 aa15.73■□□□□ 0.11
SCARB2-221ENST00000640341 MYCLP12524 364 aaPredicted RBP15.72■□□□□ 0.11
SCARB2-221ENST00000640341 SSR1P43307 286 aaKnown RBP15.72■□□□□ 0.11
SCARB2-221ENST00000640341 TTC27Q6P3X3 843 aa15.72■□□□□ 0.11
SCARB2-221ENST00000640341 DAW1Q8N136 415 aa15.72■□□□□ 0.11
SCARB2-221ENST00000640341 GMCL1P1Q8NEA9 526 aa15.72■□□□□ 0.11
SCARB2-221ENST00000640341 ZNF653Q96CK0 615 aa15.72■□□□□ 0.11
SCARB2-221ENST00000640341 TMOD2Q9NZR1 351 aa15.72■□□□□ 0.11
SCARB2-221ENST00000640341 INTUQ9ULD6 942 aa15.72■□□□□ 0.11
SCARB2-221ENST00000640341 ANKRD63C9JTQ0 380 aa15.72■□□□□ 0.11
SCARB2-221ENST00000640341 DNM1LO00429 736 aa15.72■□□□□ 0.11
SCARB2-221ENST00000640341 MXI1P50539 228 aa15.72■□□□□ 0.11
SCARB2-221ENST00000640341 NPEPPSP55786 919 aa15.72■□□□□ 0.11
SCARB2-221ENST00000640341 SOX10P56693 466 aa15.72■□□□□ 0.11
SCARB2-221ENST00000640341 DGKZQ13574 1117 aa15.72■□□□□ 0.11
SCARB2-221ENST00000640341 ZFYVE27Q5T4F4 411 aa15.72■□□□□ 0.11
SCARB2-221ENST00000640341 FAM102BQ5T8I3 360 aa15.72■□□□□ 0.11
SCARB2-221ENST00000640341 HOOK3Q86VS8 718 aa15.72■□□□□ 0.11
SCARB2-221ENST00000640341 COL23A1Q86Y22 540 aaPredicted RBP15.72■□□□□ 0.11
SCARB2-221ENST00000640341 PRELID2Q8N945 189 aa15.72■□□□□ 0.11
SCARB2-221ENST00000640341 DHX38Q92620 1227 aaKnown RBP15.72■□□□□ 0.11
SCARB2-221ENST00000640341 CEP89Q96ST8 783 aa15.72■□□□□ 0.11
SCARB2-221ENST00000640341 PRMT1Q99873 361 aaKnown RBP15.72■□□□□ 0.11
SCARB2-221ENST00000640341 TOPORSQ9NS56 1045 aaPredicted RBP15.72■□□□□ 0.11
SCARB2-221ENST00000640341 RDXP35241 583 aaKnown RBP15.72■□□□□ 0.11
SCARB2-221ENST00000640341 GPC5P78333 572 aa15.72■□□□□ 0.11
SCARB2-221ENST00000640341 E2F5Q15329 346 aa15.72■□□□□ 0.11
SCARB2-221ENST00000640341 STRIP1Q5VSL9 837 aa15.72■□□□□ 0.11
SCARB2-221ENST00000640341 PLA2G4FQ68DD2 849 aa15.72■□□□□ 0.11
SCARB2-221ENST00000640341 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.72■□□□□ 0.11
SCARB2-221ENST00000640341 PCDHB18PQ96TA0 734 aa15.72■□□□□ 0.11
SCARB2-221ENST00000640341 ELAC2Q9BQ52 826 aaKnown RBP15.72■□□□□ 0.11
SCARB2-221ENST00000640341 USP20Q9Y2K6 914 aa15.72■□□□□ 0.11
SCARB2-221ENST00000640341 ZBTB12Q9Y330 459 aaPredicted RBP15.72■□□□□ 0.11
SCARB2-221ENST00000640341 AFF2P51816 1311 aa15.71■□□□□ 0.11
SCARB2-221ENST00000640341 ARFGEF1Q9Y6D6 1849 aa15.71■□□□□ 0.11
SCARB2-221ENST00000640341 FNTAP49354 379 aa15.71■□□□□ 0.11
SCARB2-221ENST00000640341 FAM133BQ5BKY9 247 aaKnown RBP15.71■□□□□ 0.11
SCARB2-221ENST00000640341 DUPD1Q68J44 220 aa15.71■□□□□ 0.11
SCARB2-221ENST00000640341 LDHDQ86WU2 507 aa15.71■□□□□ 0.11
SCARB2-221ENST00000640341 SPATS2Q86XZ4 545 aaKnown RBP15.71■□□□□ 0.11
SCARB2-221ENST00000640341 CBWD2Q8IUF1 395 aa15.71■□□□□ 0.11
SCARB2-221ENST00000640341 ZDHHC14Q8IZN3 488 aa15.71■□□□□ 0.11
SCARB2-221ENST00000640341 ANKRD42Q8N9B4 389 aa15.71■□□□□ 0.11
SCARB2-221ENST00000640341 PRPF38AQ8NAV1 312 aaKnown RBP15.71■□□□□ 0.11
SCARB2-221ENST00000640341 IL31RAQ8NI17 732 aa15.71■□□□□ 0.11
SCARB2-221ENST00000640341 ATG4AQ8WYN0 398 aa15.71■□□□□ 0.11
SCARB2-221ENST00000640341 MASTLQ96GX5 879 aa15.71■□□□□ 0.11
SCARB2-221ENST00000640341 PI4K2AQ9BTU6 479 aa15.71■□□□□ 0.11
SCARB2-221ENST00000640341 NUP85Q9BW27 656 aa15.71■□□□□ 0.11
SCARB2-221ENST00000640341 IDI2Q9BXS1 227 aa15.71■□□□□ 0.11
SCARB2-221ENST00000640341 ASIC3Q9UHC3 531 aa15.71■□□□□ 0.11
SCARB2-221ENST00000640341 NHSQ6T4R5 1651 aa15.71■□□□□ 0.11
SCARB2-221ENST00000640341 CLDN3O15551 220 aa15.71■□□□□ 0.11
SCARB2-221ENST00000640341 ALAS1P13196 640 aa15.71■□□□□ 0.11
SCARB2-221ENST00000640341 EIF2AK2P19525 551 aaKnown RBP15.71■□□□□ 0.11
SCARB2-221ENST00000640341 POU5F1Q01860 360 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms