RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 SH2B1Q9NRF2 756 aaPredicted RBP18.22■□□□□ 0.51
COLCA2-207ENST00000639470 USP15Q9Y4E8 981 aaPredicted RBP18.22■□□□□ 0.51
COLCA2-207ENST00000639470 C19orf67A6NJJ6 358 aa18.21■□□□□ 0.51
COLCA2-207ENST00000639470 NCK2O43639 380 aa18.21■□□□□ 0.51
COLCA2-207ENST00000639470 ZNF623O75123 536 aa18.21■□□□□ 0.51
COLCA2-207ENST00000639470 EDN1P05305 212 aa18.21■□□□□ 0.51
COLCA2-207ENST00000639470 GALTP07902 379 aa18.21■□□□□ 0.51
COLCA2-207ENST00000639470 CA8P35219 290 aa18.21■□□□□ 0.51
COLCA2-207ENST00000639470 HMGN5P82970 282 aaKnown RBP18.21■□□□□ 0.51
COLCA2-207ENST00000639470 KCNC3Q14003 757 aa18.21■□□□□ 0.51
COLCA2-207ENST00000639470 IL17AQ16552 155 aa18.21■□□□□ 0.51
COLCA2-207ENST00000639470 PUS10Q3MIT2 529 aaKnown RBP18.21■□□□□ 0.51
COLCA2-207ENST00000639470 GLB1LQ6UWU2 654 aa18.21■□□□□ 0.51
COLCA2-207ENST00000639470 MRPL10Q7Z7H8 261 aaKnown RBP18.21■□□□□ 0.51
COLCA2-207ENST00000639470 ADHFE1Q8IWW8 467 aa18.21■□□□□ 0.51
COLCA2-207ENST00000639470 NXF3Q9H4D5 531 aaKnown RBP18.21■□□□□ 0.51
COLCA2-207ENST00000639470 MIOSQ9NXC5 875 aa18.21■□□□□ 0.51
COLCA2-207ENST00000639470 CACNG4Q9UBN1 327 aa18.21■□□□□ 0.51
COLCA2-207ENST00000639470 LZTS1Q9Y250 596 aa18.21■□□□□ 0.51
COLCA2-207ENST00000639470 PPME1Q9Y570 386 aa18.21■□□□□ 0.51
COLCA2-207ENST00000639470 IPPQ9Y573 584 aa18.21■□□□□ 0.51
COLCA2-207ENST00000639470 PI4K2BG5E9Z4 385 aa18.2■□□□□ 0.5
COLCA2-207ENST00000639470 EIF5BO60841 1220 aaKnown RBP18.2■□□□□ 0.5
COLCA2-207ENST00000639470 DGAT1O75907 488 aa18.2■□□□□ 0.5
COLCA2-207ENST00000639470 ERLIN2O94905 339 aa18.2■□□□□ 0.5
COLCA2-207ENST00000639470 EYA4O95677 639 aa18.2■□□□□ 0.5
COLCA2-207ENST00000639470 ARF4P18085 180 aaPredicted RBP18.2■□□□□ 0.5
COLCA2-207ENST00000639470 SP100P23497 879 aaPredicted RBP18.2■□□□□ 0.5
COLCA2-207ENST00000639470 GNL2Q13823 731 aaKnown RBP18.2■□□□□ 0.5
COLCA2-207ENST00000639470 CSPP1Q1MSJ5 1256 aa18.2■□□□□ 0.5
COLCA2-207ENST00000639470 SYCE2Q6PIF2 218 aa18.2■□□□□ 0.5
COLCA2-207ENST00000639470 FAM43BQ6ZT52 329 aaPredicted RBP18.2■□□□□ 0.5
COLCA2-207ENST00000639470 PPP2R3CQ969Q6 453 aa18.2■□□□□ 0.5
COLCA2-207ENST00000639470 TMX3Q96JJ7 454 aa18.2■□□□□ 0.5
COLCA2-207ENST00000639470 ZFP42Q96MM3 310 aa18.2■□□□□ 0.5
COLCA2-207ENST00000639470 MRPL9Q9BYD2 267 aaKnown RBP18.2■□□□□ 0.5
COLCA2-207ENST00000639470 RSAD1Q9HA92 442 aa18.2■□□□□ 0.5
COLCA2-207ENST00000639470 C2orf71A6NGG8 1288 aa18.19■□□□□ 0.5
COLCA2-207ENST00000639470 LRRIQ4A6NIV6 560 aa18.19■□□□□ 0.5
COLCA2-207ENST00000639470 GAS2O43903 313 aaKnown RBP18.19■□□□□ 0.5
COLCA2-207ENST00000639470 WEE2P0C1S8 567 aa18.19■□□□□ 0.5
COLCA2-207ENST00000639470 CDC25AP30304 524 aa18.19■□□□□ 0.5
COLCA2-207ENST00000639470 PPM1AP35813 382 aa18.19■□□□□ 0.5
COLCA2-207ENST00000639470 MLH1P40692 756 aa18.19■□□□□ 0.5
COLCA2-207ENST00000639470 ALDH7A1P49419 539 aaKnown RBP18.19■□□□□ 0.5
COLCA2-207ENST00000639470 RAB27AP51159 221 aa18.19■□□□□ 0.5
COLCA2-207ENST00000639470 RNASELQ05823 741 aaKnown RBP18.19■□□□□ 0.5
COLCA2-207ENST00000639470 COASYQ13057 564 aa18.19■□□□□ 0.5
COLCA2-207ENST00000639470 VPS52Q8N1B4 723 aa18.19■□□□□ 0.5
COLCA2-207ENST00000639470 RABGGTAQ92696 567 aa18.19■□□□□ 0.5
COLCA2-207ENST00000639470 IGSF21Q96ID5 467 aa18.19■□□□□ 0.5
COLCA2-207ENST00000639470 CCDC43Q96MW1 224 aaKnown RBP18.19■□□□□ 0.5
COLCA2-207ENST00000639470 GAD1Q99259 594 aa18.19■□□□□ 0.5
COLCA2-207ENST00000639470 KIFC3Q9BVG8 833 aa18.19■□□□□ 0.5
COLCA2-207ENST00000639470 CXCL16Q9H2A7 254 aa18.19■□□□□ 0.5
COLCA2-207ENST00000639470 PUF60Q9UHX1 559 aaKnown RBP18.19■□□□□ 0.5
COLCA2-207ENST00000639470 MUTYHQ9UIF7 546 aa18.19■□□□□ 0.5
COLCA2-207ENST00000639470 ASAP2O43150 1006 aa18.18■□□□□ 0.5
COLCA2-207ENST00000639470 CLASP2O75122 1294 aaKnown RBP18.18■□□□□ 0.5
COLCA2-207ENST00000639470 NPTXRO95502 500 aa18.18■□□□□ 0.5
COLCA2-207ENST00000639470 SSBP05455 408 aaKnown RBP eCLIP18.18■□□□□ 0.5
COLCA2-207ENST00000639470 AKAP5P24588 427 aa18.18■□□□□ 0.5
COLCA2-207ENST00000639470 U2AF2P26368 475 aaKnown RBP eCLIP18.18■□□□□ 0.59e-11■■■■□ 20.3
COLCA2-207ENST00000639470 KRT17Q04695 432 aa18.18■□□□□ 0.5
COLCA2-207ENST00000639470 MXD4Q14582 209 aaPredicted RBP18.18■□□□□ 0.5
COLCA2-207ENST00000639470 RABEP1Q15276 862 aa18.18■□□□□ 0.5
COLCA2-207ENST00000639470 IFNLR1Q8IU57 520 aaPredicted RBP18.18■□□□□ 0.5
COLCA2-207ENST00000639470 EXOC8Q8IYI6 725 aa18.18■□□□□ 0.5
COLCA2-207ENST00000639470 C12orf76Q8N812 135 aaPredicted RBP18.18■□□□□ 0.5
COLCA2-207ENST00000639470 MRPL43Q8N983 215 aaKnown RBP18.18■□□□□ 0.5
COLCA2-207ENST00000639470 POLR3CQ9BUI4 534 aaPredicted RBP18.18■□□□□ 0.5
COLCA2-207ENST00000639470 ZBP1Q9H171 429 aa18.18■□□□□ 0.5
COLCA2-207ENST00000639470 S1PR5Q9H228 398 aa18.18■□□□□ 0.5
COLCA2-207ENST00000639470 TUFT1Q9NNX1 390 aa18.18■□□□□ 0.5
COLCA2-207ENST00000639470 KLK14Q9P0G3 267 aa18.18■□□□□ 0.5
COLCA2-207ENST00000639470 PRG3Q9Y2Y8 225 aaPredicted RBP18.18■□□□□ 0.5
COLCA2-207ENST00000639470 HCFC2Q9Y5Z7 792 aa18.18■□□□□ 0.5
COLCA2-207ENST00000639470 C5orf42Q9H799 3197 aa18.18■□□□□ 0.5
COLCA2-207ENST00000639470 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.17■□□□□ 0.5
COLCA2-207ENST00000639470 CXCL14O95715 111 aa18.17■□□□□ 0.5
COLCA2-207ENST00000639470 SKIP12755 728 aa18.17■□□□□ 0.5
COLCA2-207ENST00000639470 ITGA4P13612 1032 aa18.17■□□□□ 0.5
COLCA2-207ENST00000639470 LIG1P18858 919 aa18.17■□□□□ 0.5
COLCA2-207ENST00000639470 NCLP19338 710 aaKnown RBP18.17■□□□□ 0.5
COLCA2-207ENST00000639470 RPA1P27694 616 aa18.17■□□□□ 0.5
COLCA2-207ENST00000639470 CCT6AP40227 531 aaKnown RBP18.17■□□□□ 0.5
COLCA2-207ENST00000639470 SCNN1GP51170 649 aa18.17■□□□□ 0.5
COLCA2-207ENST00000639470 PTGDRQ13258 359 aa18.17■□□□□ 0.5
COLCA2-207ENST00000639470 TMEM31Q5JXX7 168 aa18.17■□□□□ 0.5
COLCA2-207ENST00000639470 ANKRD54Q6NXT1 300 aa18.17■□□□□ 0.5
COLCA2-207ENST00000639470 PADI6Q6TGC4 694 aa18.17■□□□□ 0.5
COLCA2-207ENST00000639470 TAS1R1Q7RTX1 841 aa18.17■□□□□ 0.5
COLCA2-207ENST00000639470 PGBD4Q96DM1 585 aa18.17■□□□□ 0.5
COLCA2-207ENST00000639470 TMEM169Q96HH4 297 aa18.17■□□□□ 0.5
COLCA2-207ENST00000639470 C1QTNF1Q9BXJ1 281 aa18.17■□□□□ 0.5
COLCA2-207ENST00000639470 CSRNP2Q9H175 543 aa18.17■□□□□ 0.5
COLCA2-207ENST00000639470 MARCH5Q9NX47 278 aa18.17■□□□□ 0.5
COLCA2-207ENST00000639470 MYBP10242 640 aa18.16■□□□□ 0.5
COLCA2-207ENST00000639470 EPCAMP16422 314 aa18.16■□□□□ 0.5
COLCA2-207ENST00000639470 GJB2P29033 226 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms