RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 PASKQ96RG2 1323 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 M0R3G1 203 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 TK2O00142 265 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 ADCY5O95622 1261 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 RPN2P04844 631 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 GPSM2P81274 684 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 ACAP2Q15057 778 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 SCAIQ8N9R8 606 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 TMEM237Q96Q45 408 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 CFLARO15519 480 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 HNRNPRO43390 633 aaKnown RBP6.68□□□□□ -1.34
CDKL5-205ENST00000623535 ECE2O60344 883 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 EIF2S1P05198 315 aaKnown RBP6.68□□□□□ -1.34
CDKL5-205ENST00000623535 CYP2B6P20813 491 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 GRAPQ13588 217 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 HERC6Q8IVU3 1022 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 DNAJC10Q8IXB1 793 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 GRAPLQ8TC17 118 aaPredicted RBP6.68□□□□□ -1.34
CDKL5-205ENST00000623535 PPP1R16BQ96T49 567 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 HMX1Q9NP08 348 aaPredicted RBP6.68□□□□□ -1.34
CDKL5-205ENST00000623535 INTS10Q9NVR2 710 aaKnown RBP6.68□□□□□ -1.34
CDKL5-205ENST00000623535 GEMIN4P57678 1058 aaKnown RBP6.68□□□□□ -1.34
CDKL5-205ENST00000623535 RMDN3Q96TC7 470 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 SPZ1Q9BXG8 430 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 ASNSD1Q9NWL6 643 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 SNX1Q13596 522 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 BRD3Q15059 726 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 LONRF2Q1L5Z9 754 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 MGAT5BQ3V5L5 792 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 ATP13A4Q4VNC1 1196 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 DYMQ7RTS9 669 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 GJD4Q96KN9 370 aaPredicted RBP6.68□□□□□ -1.34
CDKL5-205ENST00000623535 CALCOCO1Q9P1Z2 691 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 GDAQ9Y2T3 454 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 PCDHA5Q9Y5H7 936 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 LMNAP02545 664 aaKnown RBP6.68□□□□□ -1.34
CDKL5-205ENST00000623535 ANXA1P04083 346 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 PSMC3P17980 439 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 KLRC2P26717 231 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 PSMC2P35998 433 aaKnown RBP6.68□□□□□ -1.34
CDKL5-205ENST00000623535 HALP42357 657 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 PPP3CCP48454 512 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 INHBEP58166 350 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 SHDQ96IW2 340 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 MTMR1Q13613 665 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 RELL1Q8IUW5 271 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 SCINQ9Y6U3 715 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 EBAG9O00559 213 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 FAM107AO95990 144 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 SLC2A3P11169 496 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 TCEA2Q15560 299 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 ZNF699Q32M78 642 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 B4GALNT4Q76KP1 1039 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 PPP1R16AQ96I34 528 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 PCMTD2Q9NV79 361 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 NDOR1Q9UHB4 597 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 KLF15Q9UIH9 416 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 DCTN3O75935 186 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 ETFBP38117 255 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 AP3M2P53677 418 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 CSE1LP55060 971 aaKnown RBP6.68□□□□□ -1.34
CDKL5-205ENST00000623535 ESRRGP62508 458 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 ZBTB38Q8NAP3 1195 aaPredicted RBP6.68□□□□□ -1.34
CDKL5-205ENST00000623535 MRPL4Q9BYD3 311 aaKnown RBP6.68□□□□□ -1.34
CDKL5-205ENST00000623535 KLC2Q9H0B6 622 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 TRMT1Q9NXH9 659 aaKnown RBP6.68□□□□□ -1.34
CDKL5-205ENST00000623535 KANSL3Q9P2N6 904 aa6.68□□□□□ -1.34
CDKL5-205ENST00000623535 ZNF839A8K0R7 811 aa6.67□□□□□ -1.34
CDKL5-205ENST00000623535 STX2P32856 288 aa6.67□□□□□ -1.34
CDKL5-205ENST00000623535 PCK1P35558 622 aa6.67□□□□□ -1.34
CDKL5-205ENST00000623535 STX17P56962 302 aa6.67□□□□□ -1.34
CDKL5-205ENST00000623535 RCOR2Q8IZ40 523 aa6.67□□□□□ -1.34
CDKL5-205ENST00000623535 CAAP1Q9H8G2 361 aa6.67□□□□□ -1.34
CDKL5-205ENST00000623535 CRYL1Q9Y2S2 319 aa6.67□□□□□ -1.34
CDKL5-205ENST00000623535 CUTAO60888 179 aa6.67□□□□□ -1.34
CDKL5-205ENST00000623535 VPS4BO75351 444 aa6.67□□□□□ -1.34
CDKL5-205ENST00000623535 GDF11O95390 407 aa6.67□□□□□ -1.34
CDKL5-205ENST00000623535 ZFXP17010 805 aaPredicted RBP6.67□□□□□ -1.34
CDKL5-205ENST00000623535 GPC3P51654 580 aa6.67□□□□□ -1.34
CDKL5-205ENST00000623535 OSTNP61366 133 aa6.67□□□□□ -1.34
CDKL5-205ENST00000623535 TMCO4Q5TGY1 634 aa6.67□□□□□ -1.34
CDKL5-205ENST00000623535 DEPDC1BQ8WUY9 529 aa6.67□□□□□ -1.34
CDKL5-205ENST00000623535 C17orf102A2RUQ5 167 aa6.67□□□□□ -1.34
CDKL5-205ENST00000623535 ACSL4O60488 711 aa6.67□□□□□ -1.34
CDKL5-205ENST00000623535 FKTNO75072 461 aa6.67□□□□□ -1.34
CDKL5-205ENST00000623535 RHOBTB3O94955 611 aa6.67□□□□□ -1.34
CDKL5-205ENST00000623535 ABCE1P61221 599 aaKnown RBP6.67□□□□□ -1.34
CDKL5-205ENST00000623535 CNTN1Q12860 1018 aa6.67□□□□□ -1.34
CDKL5-205ENST00000623535 MCEMP1Q8IX19 187 aa6.67□□□□□ -1.34
CDKL5-205ENST00000623535 NELFCDQ8IXH7 590 aa6.67□□□□□ -1.34
CDKL5-205ENST00000623535 BLIDQ8IZY5 108 aa6.67□□□□□ -1.34
CDKL5-205ENST00000623535 SHCBP1Q8NEM2 672 aa6.67□□□□□ -1.34
CDKL5-205ENST00000623535 E2F6O75461 281 aa6.67□□□□□ -1.34
CDKL5-205ENST00000623535 ALOX15P16050 662 aaPredicted RBP6.67□□□□□ -1.34
CDKL5-205ENST00000623535 TWF1Q12792 350 aa6.67□□□□□ -1.34
CDKL5-205ENST00000623535 ZCCHC8Q6NZY4 707 aaKnown RBP6.67□□□□□ -1.34
CDKL5-205ENST00000623535 CLCC1Q96S66 551 aa6.67□□□□□ -1.34
CDKL5-205ENST00000623535 ZCCHC2Q9C0B9 1178 aaKnown RBP6.67□□□□□ -1.34
CDKL5-205ENST00000623535 ZSWIM4Q9H7M6 989 aa6.67□□□□□ -1.34
CDKL5-205ENST00000623535 RAVER2Q9HCJ3 691 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms