RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 EXOC8Q8IYI6 725 aa16.9■□□□□ 0.3
TGFB1-202ENST00000597453 RNF149Q8NC42 400 aa16.9■□□□□ 0.3
TGFB1-202ENST00000597453 TCP11Q8WWU5 503 aa16.9■□□□□ 0.3
TGFB1-202ENST00000597453 RSPH1Q8WYR4 309 aa16.9■□□□□ 0.3
TGFB1-202ENST00000597453 EDAQ92838 391 aa16.9■□□□□ 0.3
TGFB1-202ENST00000597453 IGSF21Q96ID5 467 aa16.9■□□□□ 0.3
TGFB1-202ENST00000597453 MTRQ99707 1265 aa16.9■□□□□ 0.3
TGFB1-202ENST00000597453 HSD17B14Q9BPX1 270 aa16.9■□□□□ 0.3
TGFB1-202ENST00000597453 LLPHQ9BRT6 129 aaKnown RBP16.9■□□□□ 0.3
TGFB1-202ENST00000597453 GBP3Q9H0R5 595 aa16.9■□□□□ 0.3
TGFB1-202ENST00000597453 ZBP1Q9H171 429 aa16.9■□□□□ 0.3
TGFB1-202ENST00000597453 PIEZO1Q92508 2521 aa16.89■□□□□ 0.29
TGFB1-202ENST00000597453 GAS2O43903 313 aaKnown RBP16.89■□□□□ 0.29
TGFB1-202ENST00000597453 GALTP07902 379 aa16.89■□□□□ 0.29
TGFB1-202ENST00000597453 SLC11A1P49279 550 aa16.89■□□□□ 0.29
TGFB1-202ENST00000597453 RNASELQ05823 741 aaKnown RBP16.89■□□□□ 0.29
TGFB1-202ENST00000597453 MRPL10Q7Z7H8 261 aaKnown RBP16.89■□□□□ 0.29
TGFB1-202ENST00000597453 VPS52Q8N1B4 723 aa16.89■□□□□ 0.29
TGFB1-202ENST00000597453 PGBD4Q96DM1 585 aa16.89■□□□□ 0.29
TGFB1-202ENST00000597453 VN1R3Q9BXE9 311 aa16.89■□□□□ 0.29
TGFB1-202ENST00000597453 TTC12Q9H892 705 aaPredicted RBP16.89■□□□□ 0.29
TGFB1-202ENST00000597453 PCDHA12Q9UN75 941 aa16.89■□□□□ 0.29
TGFB1-202ENST00000597453 ZDBF2Q9HCK1 2354 aa16.88■□□□□ 0.29
TGFB1-202ENST00000597453 WDFY4Q6ZS81 3184 aa16.88■□□□□ 0.29
TGFB1-202ENST00000597453 A0A087WWV3 80 aa16.88■□□□□ 0.29
TGFB1-202ENST00000597453 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.88■□□□□ 0.29
TGFB1-202ENST00000597453 NEMFO60524 1076 aa16.88■□□□□ 0.29
TGFB1-202ENST00000597453 DDHD2O94830 711 aa16.88■□□□□ 0.29
TGFB1-202ENST00000597453 LYPLA2O95372 231 aa16.88■□□□□ 0.29
TGFB1-202ENST00000597453 CXCL14O95715 111 aa16.88■□□□□ 0.29
TGFB1-202ENST00000597453 TXKP42681 527 aa16.88■□□□□ 0.29
TGFB1-202ENST00000597453 MCM2P49736 904 aa16.88■□□□□ 0.29
TGFB1-202ENST00000597453 DDX53Q86TM3 631 aaKnown RBP16.88■□□□□ 0.29
TGFB1-202ENST00000597453 ASAP3Q8TDY4 903 aa16.88■□□□□ 0.29
TGFB1-202ENST00000597453 CASP10Q92851 521 aa16.88■□□□□ 0.29
TGFB1-202ENST00000597453 MTMR9Q96QG7 549 aa16.88■□□□□ 0.29
TGFB1-202ENST00000597453 RSAD1Q9HA92 442 aa16.88■□□□□ 0.29
TGFB1-202ENST00000597453 TDRD15B5MCY1 1934 aaKnown RBP16.88■□□□□ 0.29
TGFB1-202ENST00000597453 ASAP2O43150 1006 aa16.87■□□□□ 0.29
TGFB1-202ENST00000597453 TSPAN1O60635 241 aa16.87■□□□□ 0.29
TGFB1-202ENST00000597453 CTSAP10619 480 aa16.87■□□□□ 0.29
TGFB1-202ENST00000597453 HOXB8P17481 243 aaPredicted RBP16.87■□□□□ 0.29
TGFB1-202ENST00000597453 SP100P23497 879 aaPredicted RBP16.87■□□□□ 0.29
TGFB1-202ENST00000597453 HOXD11P31277 338 aaPredicted RBP16.87■□□□□ 0.29
TGFB1-202ENST00000597453 PTENP60484 403 aa16.87■□□□□ 0.29
TGFB1-202ENST00000597453 GUCY1B3Q02153 619 aa16.87■□□□□ 0.29
TGFB1-202ENST00000597453 CAPSQ13938 189 aa16.87■□□□□ 0.29
TGFB1-202ENST00000597453 TRIM29Q14134 588 aa16.87■□□□□ 0.29
TGFB1-202ENST00000597453 SMG8Q8ND04 991 aaKnown RBP16.87■□□□□ 0.29
TGFB1-202ENST00000597453 URGCPQ8TCY9 931 aa16.87■□□□□ 0.29
TGFB1-202ENST00000597453 EIF2AQ9BY44 585 aaKnown RBP16.87■□□□□ 0.29
TGFB1-202ENST00000597453 TMEM60Q9H2L4 133 aa16.87■□□□□ 0.29
TGFB1-202ENST00000597453 MYO10Q9HD67 2058 aa16.86■□□□□ 0.29
TGFB1-202ENST00000597453 POTEMA6NI47 508 aa16.86■□□□□ 0.29
TGFB1-202ENST00000597453 ERLIN2O94905 339 aa16.86■□□□□ 0.29
TGFB1-202ENST00000597453 CD2BP2O95400 341 aaKnown RBP16.86■□□□□ 0.29
TGFB1-202ENST00000597453 POMCP01189 267 aa16.86■□□□□ 0.29
TGFB1-202ENST00000597453 EPCAMP16422 314 aa16.86■□□□□ 0.29
TGFB1-202ENST00000597453 NCLP19338 710 aaKnown RBP16.86■□□□□ 0.29
TGFB1-202ENST00000597453 RARRES1P49788 294 aa16.86■□□□□ 0.29
TGFB1-202ENST00000597453 HMGN5P82970 282 aaKnown RBP16.86■□□□□ 0.29
TGFB1-202ENST00000597453 ZXDAP98168 799 aa16.86■□□□□ 0.29
TGFB1-202ENST00000597453 MBTD1Q05BQ5 628 aa16.86■□□□□ 0.29
TGFB1-202ENST00000597453 MXD4Q14582 209 aaPredicted RBP16.86■□□□□ 0.29
TGFB1-202ENST00000597453 KANK3Q6NY19 840 aa16.86■□□□□ 0.29
TGFB1-202ENST00000597453 TRIM67Q6ZTA4 783 aa16.86■□□□□ 0.29
TGFB1-202ENST00000597453 FEZF2Q8TBJ5 459 aa16.86■□□□□ 0.29
TGFB1-202ENST00000597453 PIGOQ8TEQ8 1089 aa16.86■□□□□ 0.29
TGFB1-202ENST00000597453 CPB2Q96IY4 423 aa16.86■□□□□ 0.29
TGFB1-202ENST00000597453 ANKEF1Q9NU02 776 aa16.86■□□□□ 0.29
TGFB1-202ENST00000597453 IPPQ9Y573 584 aa16.86■□□□□ 0.29
TGFB1-202ENST00000597453 IRAK3Q9Y616 596 aa16.86■□□□□ 0.29
TGFB1-202ENST00000597453 CNTNAP2Q9UHC6 1331 aa16.86■□□□□ 0.29
TGFB1-202ENST00000597453 DENND4AQ7Z401 1863 aa16.85■□□□□ 0.29
TGFB1-202ENST00000597453 KMT2EQ8IZD2 1858 aa16.85■□□□□ 0.29
TGFB1-202ENST00000597453 TMEM221A6NGB7 291 aa16.85■□□□□ 0.29
TGFB1-202ENST00000597453 INO80B-WBP1J3KQ70 363 aa16.85■□□□□ 0.29
TGFB1-202ENST00000597453 M0R296 226 aa16.85■□□□□ 0.29
TGFB1-202ENST00000597453 DGAT1O75907 488 aa16.85■□□□□ 0.29
TGFB1-202ENST00000597453 WEE2P0C1S8 567 aa16.85■□□□□ 0.29
TGFB1-202ENST00000597453 ATP2B1P20020 1258 aa16.85■□□□□ 0.29
TGFB1-202ENST00000597453 GLRA2P23416 452 aa16.85■□□□□ 0.29
TGFB1-202ENST00000597453 ARL2P36404 184 aa16.85■□□□□ 0.29
TGFB1-202ENST00000597453 BMS1Q14692 1282 aaKnown RBP16.85■□□□□ 0.29
TGFB1-202ENST00000597453 PTPN14Q15678 1187 aa16.85■□□□□ 0.29
TGFB1-202ENST00000597453 AMHR2Q16671 573 aa16.85■□□□□ 0.29
TGFB1-202ENST00000597453 TPRNQ4KMQ1 711 aa16.85■□□□□ 0.29
TGFB1-202ENST00000597453 IFNLR1Q8IU57 520 aaPredicted RBP16.85■□□□□ 0.29
TGFB1-202ENST00000597453 C12orf76Q8N812 135 aaPredicted RBP16.85■□□□□ 0.29
TGFB1-202ENST00000597453 RNF39Q9H2S5 420 aa16.85■□□□□ 0.29
TGFB1-202ENST00000597453 ADAM7Q9H2U9 754 aa16.85■□□□□ 0.29
TGFB1-202ENST00000597453 POMKQ9H5K3 350 aa16.85■□□□□ 0.29
TGFB1-202ENST00000597453 HES2Q9Y543 173 aa16.85■□□□□ 0.29
TGFB1-202ENST00000597453 C2orf16Q68DN1 1984 aa16.84■□□□□ 0.29
TGFB1-202ENST00000597453 CARNS1A5YM72 827 aa16.84■□□□□ 0.29
TGFB1-202ENST00000597453 NRP1O14786 923 aa16.84■□□□□ 0.29
TGFB1-202ENST00000597453 B4GALT5O43286 388 aa16.84■□□□□ 0.29
TGFB1-202ENST00000597453 SSBP05455 408 aaKnown RBP eCLIP16.84■□□□□ 0.29
TGFB1-202ENST00000597453 SPATA31C1P0DKV0 1188 aa16.84■□□□□ 0.29
TGFB1-202ENST00000597453 ITGA4P13612 1032 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms