RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-222	ENST00000584377	SYTL5	Q8TDW5	730 aa	Predicted RBP	14.3	□□□□□ -0.12
CSNK1D-222	ENST00000584377	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	14.3	□□□□□ -0.12	1e-13	■■■■■ 54.3
CSNK1D-222	ENST00000584377	N4BP2L2	Q92802	583 aa	Predicted RBP	14.3	□□□□□ -0.12
CSNK1D-222	ENST00000584377	FAXDC2	Q96IV6	333 aa		14.3	□□□□□ -0.12
CSNK1D-222	ENST00000584377	BCS1L	Q9Y276	419 aa		14.3	□□□□□ -0.12
CSNK1D-222	ENST00000584377	PHF20L1	A8MW92	1017 aa		14.29	□□□□□ -0.12
CSNK1D-222	ENST00000584377	FSBP	O95073	299 aa		14.29	□□□□□ -0.12
CSNK1D-222	ENST00000584377	YWHAB	P31946	246 aa	Known RBP	14.29	□□□□□ -0.12
CSNK1D-222	ENST00000584377	GNGT1	P63211	74 aa		14.29	□□□□□ -0.12
CSNK1D-222	ENST00000584377	GHRHR	Q02643	423 aa		14.29	□□□□□ -0.12
CSNK1D-222	ENST00000584377	RASA3	Q14644	834 aa		14.29	□□□□□ -0.12
CSNK1D-222	ENST00000584377	KIF22	Q14807	665 aa		14.29	□□□□□ -0.12
CSNK1D-222	ENST00000584377	TRMT1L	Q7Z2T5	733 aa	Known RBP	14.29	□□□□□ -0.12
CSNK1D-222	ENST00000584377	PALB2	Q86YC2	1186 aa		14.29	□□□□□ -0.12
CSNK1D-222	ENST00000584377	EIF1AD	Q8N9N8	165 aa	Known RBP	14.29	□□□□□ -0.12
CSNK1D-222	ENST00000584377	ZBED3	Q96IU2	234 aa	Predicted RBP	14.29	□□□□□ -0.12
CSNK1D-222	ENST00000584377	UBE2T	Q9NPD8	197 aa	Predicted RBP	14.29	□□□□□ -0.12
CSNK1D-222	ENST00000584377	TBC1D22B	Q9NU19	505 aa		14.29	□□□□□ -0.12
CSNK1D-222	ENST00000584377	TAS2R14	Q9NYV8	317 aa		14.29	□□□□□ -0.12
CSNK1D-222	ENST00000584377	LOXHD1	Q8IVV2	1947 aa		14.29	□□□□□ -0.12
CSNK1D-222	ENST00000584377	ZNF233	A6NK53	670 aa		14.29	□□□□□ -0.12
CSNK1D-222	ENST00000584377	ITGA4	P13612	1032 aa		14.29	□□□□□ -0.12
CSNK1D-222	ENST00000584377	DPEP1	P16444	411 aa		14.29	□□□□□ -0.12
CSNK1D-222	ENST00000584377	CXCL9	Q07325	125 aa		14.29	□□□□□ -0.12
CSNK1D-222	ENST00000584377	PPP3CA	Q08209	521 aa		14.29	□□□□□ -0.12
CSNK1D-222	ENST00000584377	SPP2	Q13103	211 aa		14.29	□□□□□ -0.12
CSNK1D-222	ENST00000584377	DGKZ	Q13574	1117 aa		14.29	□□□□□ -0.12
CSNK1D-222	ENST00000584377	CUL1	Q13616	776 aa		14.29	□□□□□ -0.12
CSNK1D-222	ENST00000584377	OTUD6B	Q8N6M0	293 aa		14.29	□□□□□ -0.12
CSNK1D-222	ENST00000584377	XXYLT1	Q8NBI6	393 aa		14.29	□□□□□ -0.12
CSNK1D-222	ENST00000584377	THAP2	Q9H0W7	228 aa		14.29	□□□□□ -0.12
CSNK1D-222	ENST00000584377	SLC38A10	Q9HBR0	1119 aa		14.29	□□□□□ -0.12
CSNK1D-222	ENST00000584377	PPP1R9A	Q9ULJ8	1098 aa		14.29	□□□□□ -0.12
CSNK1D-222	ENST00000584377	TMEM150B	A6NC51	233 aa		14.28	□□□□□ -0.12
CSNK1D-222	ENST00000584377	LYPLA2	O95372	231 aa		14.28	□□□□□ -0.12
CSNK1D-222	ENST00000584377	GCLM	P48507	274 aa		14.28	□□□□□ -0.12
CSNK1D-222	ENST00000584377	RPS6	P62753	249 aa	Known RBP	14.28	□□□□□ -0.12
CSNK1D-222	ENST00000584377	HAUS6	Q7Z4H7	955 aa		14.28	□□□□□ -0.12
CSNK1D-222	ENST00000584377	C12orf56	Q8IXR9	622 aa		14.28	□□□□□ -0.12
CSNK1D-222	ENST00000584377	PIK3R5	Q8WYR1	880 aa		14.28	□□□□□ -0.12
CSNK1D-222	ENST00000584377	ARHGEF26	Q96DR7	871 aa		14.28	□□□□□ -0.12
CSNK1D-222	ENST00000584377	SGSM3	Q96HU1	749 aa		14.28	□□□□□ -0.12
CSNK1D-222	ENST00000584377	TAAR1	Q96RJ0	339 aa		14.28	□□□□□ -0.12
CSNK1D-222	ENST00000584377	MYOZ2	Q9NPC6	264 aa		14.28	□□□□□ -0.12
CSNK1D-222	ENST00000584377	HSPBP1	Q9NZL4	362 aa		14.28	□□□□□ -0.12
CSNK1D-222	ENST00000584377	ANKRD62	A6NC57	917 aa		14.28	□□□□□ -0.12
CSNK1D-222	ENST00000584377	KIAA0754	O94854	1291 aa		14.28	□□□□□ -0.12
CSNK1D-222	ENST00000584377	KCNA3	P22001	575 aa		14.28	□□□□□ -0.12
CSNK1D-222	ENST00000584377	NF2	P35240	595 aa		14.28	□□□□□ -0.12
CSNK1D-222	ENST00000584377	PPAT	Q06203	517 aa		14.28	□□□□□ -0.12
CSNK1D-222	ENST00000584377	PREPL	Q4J6C6	727 aa	Predicted RBP	14.28	□□□□□ -0.12
CSNK1D-222	ENST00000584377	KCTD16	Q68DU8	428 aa		14.28	□□□□□ -0.12
CSNK1D-222	ENST00000584377	PROCA1	Q8NCQ7	364 aa	Predicted RBP	14.28	□□□□□ -0.12
CSNK1D-222	ENST00000584377	TMEM174	Q8WUU8	243 aa		14.28	□□□□□ -0.12
CSNK1D-222	ENST00000584377	CAMKK2	Q96RR4	588 aa		14.28	□□□□□ -0.12
CSNK1D-222	ENST00000584377	AGPAT1	Q99943	283 aa		14.28	□□□□□ -0.12
CSNK1D-222	ENST00000584377	KIAA1683	Q9H0B3	1180 aa		14.28	□□□□□ -0.12
CSNK1D-222	ENST00000584377	VPS33B	Q9H267	617 aa		14.28	□□□□□ -0.12
CSNK1D-222	ENST00000584377	AMACR	Q9UHK6	382 aa		14.28	□□□□□ -0.12
CSNK1D-222	ENST00000584377	P4HA2	O15460	535 aa		14.28	□□□□□ -0.12
CSNK1D-222	ENST00000584377	MYCL	P12524	364 aa	Predicted RBP	14.28	□□□□□ -0.12
CSNK1D-222	ENST00000584377	ECHS1	P30084	290 aa		14.28	□□□□□ -0.12
CSNK1D-222	ENST00000584377	HSPA9	P38646	679 aa	Known RBP	14.28	□□□□□ -0.12
CSNK1D-222	ENST00000584377	GTF2B	Q00403	316 aa		14.28	□□□□□ -0.12
CSNK1D-222	ENST00000584377	UGCG	Q16739	394 aa		14.28	□□□□□ -0.12
CSNK1D-222	ENST00000584377	ARHGEF19	Q8IW93	802 aa		14.28	□□□□□ -0.12
CSNK1D-222	ENST00000584377	SLC20A1	Q8WUM9	679 aa		14.28	□□□□□ -0.12
CSNK1D-222	ENST00000584377	SLITRK6	Q9H5Y7	841 aa		14.28	□□□□□ -0.12
CSNK1D-222	ENST00000584377	GPRC5C	Q9NQ84	441 aa		14.28	□□□□□ -0.12
CSNK1D-222	ENST00000584377	TCEAL9	Q9UHQ7	104 aa		14.28	□□□□□ -0.12
CSNK1D-222	ENST00000584377	ASTN2	O75129	1339 aa	Predicted RBP	14.27	□□□□□ -0.12
CSNK1D-222	ENST00000584377	ATXN2	Q99700	1313 aa	Known RBP	14.27	□□□□□ -0.12
CSNK1D-222	ENST00000584377	RGPD3	A6NKT7	1758 aa	Predicted RBP	14.27	□□□□□ -0.12
CSNK1D-222	ENST00000584377	RGPD4	Q7Z3J3	1758 aa		14.27	□□□□□ -0.12
CSNK1D-222	ENST00000584377	BACH1	O14867	736 aa		14.27	□□□□□ -0.12
CSNK1D-222	ENST00000584377	SLC16A4	O15374	487 aa		14.27	□□□□□ -0.12
CSNK1D-222	ENST00000584377	FGG	P02679	453 aa		14.27	□□□□□ -0.12
CSNK1D-222	ENST00000584377	PEX3	P56589	373 aa		14.27	□□□□□ -0.12
CSNK1D-222	ENST00000584377	PGM5	Q15124	567 aa		14.27	□□□□□ -0.12
CSNK1D-222	ENST00000584377	EPC2	Q52LR7	807 aa		14.27	□□□□□ -0.12
CSNK1D-222	ENST00000584377	TTC19	Q6DKK2	380 aa	Predicted RBP	14.27	□□□□□ -0.12
CSNK1D-222	ENST00000584377	B4GALNT4	Q76KP1	1039 aa		14.27	□□□□□ -0.12
CSNK1D-222	ENST00000584377	DDX42	Q86XP3	938 aa	Known RBP eCLIP	14.27	□□□□□ -0.12
CSNK1D-222	ENST00000584377	SH2D3C	Q8N5H7	860 aa		14.27	□□□□□ -0.12
CSNK1D-222	ENST00000584377	RNF217	Q8TC41	542 aa		14.27	□□□□□ -0.12
CSNK1D-222	ENST00000584377	MAP3K20	Q9NYL2	800 aa	Known RBP	14.27	□□□□□ -0.12
CSNK1D-222	ENST00000584377	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	14.27	□□□□□ -0.13
CSNK1D-222	ENST00000584377	C1orf220	Q5T0J3	134 aa		14.27	□□□□□ -0.13
CSNK1D-222	ENST00000584377	MAATS1	Q7Z4T9	603 aa		14.27	□□□□□ -0.13
CSNK1D-222	ENST00000584377	CD302	Q8IX05	232 aa		14.27	□□□□□ -0.13
CSNK1D-222	ENST00000584377	C4orf19	Q8IY42	314 aa		14.27	□□□□□ -0.13
CSNK1D-222	ENST00000584377	ZSWIM2	Q8NEG5	633 aa		14.27	□□□□□ -0.13
CSNK1D-222	ENST00000584377	CCDC26	Q8TAB7	109 aa		14.27	□□□□□ -0.13
CSNK1D-222	ENST00000584377	ST6GALNAC4	Q9H4F1	302 aa		14.27	□□□□□ -0.13
CSNK1D-222	ENST00000584377	TTC7A	Q9ULT0	858 aa	Predicted RBP	14.27	□□□□□ -0.13
CSNK1D-222	ENST00000584377	CTDP1	Q9Y5B0	961 aa	Predicted RBP	14.27	□□□□□ -0.13
CSNK1D-222	ENST00000584377	TULP1	O00294	542 aa	Predicted RBP	14.26	□□□□□ -0.13
CSNK1D-222	ENST00000584377	DDX3Y	O15523	660 aa	Known RBP	14.26	□□□□□ -0.13
CSNK1D-222	ENST00000584377	MEFV	O15553	781 aa	Predicted RBP	14.26	□□□□□ -0.13
CSNK1D-222	ENST00000584377	ATP9A	O75110	1047 aa		14.26	□□□□□ -0.13

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