RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 SCP2P22307 547 aa12.87□□□□□ -0.35
ERBB2-206ENST00000578373 NAB2Q15742 525 aa12.87□□□□□ -0.35
ERBB2-206ENST00000578373 ZBED8Q8IZ13 594 aa12.87□□□□□ -0.35
ERBB2-206ENST00000578373 IL17RAQ96F46 866 aa12.87□□□□□ -0.35
ERBB2-206ENST00000578373 HEXIM2Q96MH2 286 aaKnown RBP12.87□□□□□ -0.35
ERBB2-206ENST00000578373 KLF6Q99612 283 aaPredicted RBP12.87□□□□□ -0.35
ERBB2-206ENST00000578373 ADPGKQ9BRR6 497 aa12.87□□□□□ -0.35
ERBB2-206ENST00000578373 KIFC3Q9BVG8 833 aa12.87□□□□□ -0.35
ERBB2-206ENST00000578373 EDEM3Q9BZQ6 932 aa12.87□□□□□ -0.35
ERBB2-206ENST00000578373 ESRRAP11474 423 aaPredicted RBP12.87□□□□□ -0.35
ERBB2-206ENST00000578373 YWHAEP62258 255 aaKnown RBP12.87□□□□□ -0.35
ERBB2-206ENST00000578373 SLC29A2Q14542 456 aa12.87□□□□□ -0.35
ERBB2-206ENST00000578373 PLA2G4FQ68DD2 849 aa12.87□□□□□ -0.35
ERBB2-206ENST00000578373 C16orf86Q6ZW13 317 aa12.87□□□□□ -0.35
ERBB2-206ENST00000578373 OSGEPQ9NPF4 335 aa12.87□□□□□ -0.35
ERBB2-206ENST00000578373 NAGPAQ9UK23 515 aa12.87□□□□□ -0.35
ERBB2-206ENST00000578373 VWDEQ8N2E2 1590 aa12.86□□□□□ -0.35
ERBB2-206ENST00000578373 RNF225M0QZC1 329 aaPredicted RBP12.86□□□□□ -0.35
ERBB2-206ENST00000578373 MED24O75448 989 aa12.86□□□□□ -0.35
ERBB2-206ENST00000578373 CPP00450 1065 aa12.86□□□□□ -0.35
ERBB2-206ENST00000578373 ASNSP08243 561 aa12.86□□□□□ -0.35
ERBB2-206ENST00000578373 TBX2Q13207 712 aaPredicted RBP12.86□□□□□ -0.35
ERBB2-206ENST00000578373 KIAA0895Q8NCT3 520 aa12.86□□□□□ -0.35
ERBB2-206ENST00000578373 SLITRK6Q9H5Y7 841 aa12.86□□□□□ -0.35
ERBB2-206ENST00000578373 IL17RBQ9NRM6 502 aa12.86□□□□□ -0.35
ERBB2-206ENST00000578373 A6NJR5 290 aa12.86□□□□□ -0.35
ERBB2-206ENST00000578373 CYP11B2P19099 503 aa12.86□□□□□ -0.35
ERBB2-206ENST00000578373 EAPPQ56P03 285 aaPredicted RBP12.86□□□□□ -0.35
ERBB2-206ENST00000578373 FAM47CQ5HY64 1035 aa12.86□□□□□ -0.35
ERBB2-206ENST00000578373 SLC27A3Q5K4L6 730 aa12.86□□□□□ -0.35
ERBB2-206ENST00000578373 KLHDC7AQ5VTJ3 777 aa12.86□□□□□ -0.35
ERBB2-206ENST00000578373 KRT39Q6A163 491 aa12.86□□□□□ -0.35
ERBB2-206ENST00000578373 CENPUQ71F23 418 aa12.86□□□□□ -0.35
ERBB2-206ENST00000578373 MAP7D3Q8IWC1 876 aa12.86□□□□□ -0.35
ERBB2-206ENST00000578373 C4orf33Q8N1A6 199 aa12.86□□□□□ -0.35
ERBB2-206ENST00000578373 DNAAF3Q8N9W5 541 aa12.86□□□□□ -0.35
ERBB2-206ENST00000578373 IFT122Q9HBG6 1241 aa12.86□□□□□ -0.35
ERBB2-206ENST00000578373 ZNF277Q9NRM2 450 aaPredicted RBP12.86□□□□□ -0.35
ERBB2-206ENST00000578373 CCDC195A0A1B0GUA6 201 aa12.86□□□□□ -0.35
ERBB2-206ENST00000578373 PALM3A6NDB9 673 aaPredicted RBP12.86□□□□□ -0.35
ERBB2-206ENST00000578373 H0YCG3 227 aa12.86□□□□□ -0.35
ERBB2-206ENST00000578373 P4HBP07237 508 aaKnown RBP12.86□□□□□ -0.35
ERBB2-206ENST00000578373 COMTP21964 271 aa12.86□□□□□ -0.35
ERBB2-206ENST00000578373 CHRNA3P32297 505 aa12.86□□□□□ -0.35
ERBB2-206ENST00000578373 HSD17B3P37058 310 aa12.86□□□□□ -0.35
ERBB2-206ENST00000578373 POLE2P56282 527 aa12.86□□□□□ -0.35
ERBB2-206ENST00000578373 PODNQ7Z5L7 613 aa12.86□□□□□ -0.35
ERBB2-206ENST00000578373 PPARGC1AQ9UBK2 798 aaKnown RBP12.86□□□□□ -0.35
ERBB2-206ENST00000578373 FNDC3AQ9Y2H6 1198 aaKnown RBP12.86□□□□□ -0.35
ERBB2-206ENST00000578373 MYOM1P52179 1685 aa12.86□□□□□ -0.35
ERBB2-206ENST00000578373 PDE2AO00408 941 aaPredicted RBP12.85□□□□□ -0.35
ERBB2-206ENST00000578373 SNX16P57768 344 aa12.85□□□□□ -0.35
ERBB2-206ENST00000578373 MKRN3Q13064 507 aaKnown RBP12.85□□□□□ -0.35
ERBB2-206ENST00000578373 IZUMO3Q5VZ72 239 aa12.85□□□□□ -0.35
ERBB2-206ENST00000578373 DCAF15Q66K64 600 aa12.85□□□□□ -0.35
ERBB2-206ENST00000578373 CYFIP2Q96F07 1278 aa12.85□□□□□ -0.35
ERBB2-206ENST00000578373 TRIM11Q96F44 468 aa12.85□□□□□ -0.35
ERBB2-206ENST00000578373 AS3MTQ9HBK9 375 aa12.85□□□□□ -0.35
ERBB2-206ENST00000578373 PFDN4Q9NQP4 134 aa12.85□□□□□ -0.35
ERBB2-206ENST00000578373 APEX2Q9UBZ4 518 aa12.85□□□□□ -0.35
ERBB2-206ENST00000578373 KCNG1Q9UIX4 513 aa12.85□□□□□ -0.35
ERBB2-206ENST00000578373 CFLARO15519 480 aa12.85□□□□□ -0.35
ERBB2-206ENST00000578373 ITGA4P13612 1032 aa12.85□□□□□ -0.35
ERBB2-206ENST00000578373 PSMC6P62333 389 aa12.85□□□□□ -0.35
ERBB2-206ENST00000578373 PDIA2Q13087 525 aaKnown RBP12.85□□□□□ -0.35
ERBB2-206ENST00000578373 KRT27Q7Z3Y8 459 aa12.85□□□□□ -0.35
ERBB2-206ENST00000578373 PCGF5Q86SE9 256 aa12.85□□□□□ -0.35
ERBB2-206ENST00000578373 ZC3H18Q86VM9 953 aaKnown RBP12.85□□□□□ -0.35
ERBB2-206ENST00000578373 MMGT1Q8N4V1 131 aa12.85□□□□□ -0.35
ERBB2-206ENST00000578373 GSDMBQ8TAX9 411 aa12.85□□□□□ -0.35
ERBB2-206ENST00000578373 SPIRE2Q8WWL2 714 aa12.85□□□□□ -0.35
ERBB2-206ENST00000578373 DUSP9Q99956 384 aaKnown RBP12.85□□□□□ -0.35
ERBB2-206ENST00000578373 THAP2Q9H0W7 228 aa12.85□□□□□ -0.35
ERBB2-206ENST00000578373 LOC102724159A0A0B4J2E5 919 aa12.85□□□□□ -0.35
ERBB2-206ENST00000578373 NCF2P19878 526 aaPredicted RBP12.85□□□□□ -0.35
ERBB2-206ENST00000578373 MDM2Q00987 491 aaPredicted RBP12.85□□□□□ -0.35
ERBB2-206ENST00000578373 ITKQ08881 620 aa12.85□□□□□ -0.35
ERBB2-206ENST00000578373 SPARCL1Q14515 664 aa12.85□□□□□ -0.35
ERBB2-206ENST00000578373 PWP2Q15269 919 aaKnown RBP12.85□□□□□ -0.35
ERBB2-206ENST00000578373 CCDC93Q567U6 631 aa12.85□□□□□ -0.35
ERBB2-206ENST00000578373 RAPH1Q70E73 1250 aa12.85□□□□□ -0.35
ERBB2-206ENST00000578373 JAMLQ86YT9 394 aa12.85□□□□□ -0.35
ERBB2-206ENST00000578373 PPM1NQ8N819 430 aa12.85□□□□□ -0.35
ERBB2-206ENST00000578373 CYP2W1Q8TAV3 490 aa12.85□□□□□ -0.35
ERBB2-206ENST00000578373 MASTLQ96GX5 879 aa12.85□□□□□ -0.35
ERBB2-206ENST00000578373 SLC13A1Q9BZW2 595 aa12.85□□□□□ -0.35
ERBB2-206ENST00000578373 PRR12Q9ULL5 1215 aa12.85□□□□□ -0.35
ERBB2-206ENST00000578373 TECPR2O15040 1411 aa12.85□□□□□ -0.35
ERBB2-206ENST00000578373 WDR64B1ANS9 1081 aa12.85□□□□□ -0.35
ERBB2-206ENST00000578373 FAM153BP0C7A2 387 aa12.85□□□□□ -0.35
ERBB2-206ENST00000578373 FAM153CQ494X1 144 aa12.85□□□□□ -0.35
ERBB2-206ENST00000578373 PRAMEF18Q5VWM3 479 aa12.85□□□□□ -0.35
ERBB2-206ENST00000578373 SNRNP48Q6IEG0 339 aaKnown RBP12.85□□□□□ -0.35
ERBB2-206ENST00000578373 ACSF2Q96CM8 615 aaPredicted RBP12.85□□□□□ -0.35
ERBB2-206ENST00000578373 ANKRD36BP1Q96IX9 119 aa12.85□□□□□ -0.35
ERBB2-206ENST00000578373 RUSC1Q9BVN2 902 aa12.85□□□□□ -0.35
ERBB2-206ENST00000578373 FAM153AQ9UHL3 310 aa12.85□□□□□ -0.35
ERBB2-206ENST00000578373 ZHX2Q9Y6X8 837 aa12.85□□□□□ -0.35
ERBB2-206ENST00000578373 ARHGEF28Q8N1W1 1705 aaKnown RBP12.84□□□□□ -0.35
ERBB2-206ENST00000578373 CFAP69A5D8W1 941 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms