RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 TRAF7Q6Q0C0 670 aa18.16■□□□□ 0.5
TPM1-219ENST00000559397 ZNF410Q86VK4 478 aa18.16■□□□□ 0.5
TPM1-219ENST00000559397 FAM178BQ8IXR5 827 aa18.16■□□□□ 0.5
TPM1-219ENST00000559397 ZNF710Q8N1W2 664 aa18.16■□□□□ 0.5
TPM1-219ENST00000559397 PPP1R16BQ96T49 567 aa18.16■□□□□ 0.5
TPM1-219ENST00000559397 FDXACB1Q9BRP7 624 aaPredicted RBP18.16■□□□□ 0.5
TPM1-219ENST00000559397 KIFC3Q9BVG8 833 aa18.16■□□□□ 0.5
TPM1-219ENST00000559397 SRRTQ9BXP5 876 aaKnown RBP18.16■□□□□ 0.5
TPM1-219ENST00000559397 NFKBIZQ9BYH8 718 aa18.16■□□□□ 0.5
TPM1-219ENST00000559397 FGFBP2Q9BYJ0 223 aa18.16■□□□□ 0.5
TPM1-219ENST00000559397 CDHR5Q9HBB8 845 aa18.16■□□□□ 0.5
TPM1-219ENST00000559397 KMT5AQ9NQR1 393 aa18.16■□□□□ 0.5
TPM1-219ENST00000559397 TBC1D7Q9P0N9 293 aa18.16■□□□□ 0.5
TPM1-219ENST00000559397 CCDC169A6NNP5 214 aa18.15■□□□□ 0.5
TPM1-219ENST00000559397 KCNJ18B7U540 433 aa18.15■□□□□ 0.5
TPM1-219ENST00000559397 CHRNA1P02708 482 aa18.15■□□□□ 0.5
TPM1-219ENST00000559397 CLTBP09497 229 aa18.15■□□□□ 0.5
TPM1-219ENST00000559397 EEF1GP26641 437 aaKnown RBP18.15■□□□□ 0.5
TPM1-219ENST00000559397 NMT1P30419 496 aaKnown RBP18.15■□□□□ 0.5
TPM1-219ENST00000559397 TFDP1Q14186 410 aa18.15■□□□□ 0.5
TPM1-219ENST00000559397 KCNJ12Q14500 433 aa18.15■□□□□ 0.5
TPM1-219ENST00000559397 KRT31Q15323 416 aa18.15■□□□□ 0.5
TPM1-219ENST00000559397 ZCWPW2Q504Y3 356 aa18.15■□□□□ 0.5
TPM1-219ENST00000559397 EPM2AIP1Q7L775 607 aaPredicted RBP18.15■□□□□ 0.5
TPM1-219ENST00000559397 ZNF720Q7Z2F6 126 aa18.15■□□□□ 0.5
TPM1-219ENST00000559397 TMC6Q7Z403 805 aa18.15■□□□□ 0.5
TPM1-219ENST00000559397 IFNLR1Q8IU57 520 aaPredicted RBP18.15■□□□□ 0.5
TPM1-219ENST00000559397 CSGALNACT2Q8N6G5 542 aa18.15■□□□□ 0.5
TPM1-219ENST00000559397 SCFD1Q8WVM8 642 aa18.15■□□□□ 0.5
TPM1-219ENST00000559397 KCNN1Q92952 543 aa18.15■□□□□ 0.5
TPM1-219ENST00000559397 ZNF830Q96NB3 372 aaPredicted RBP18.15■□□□□ 0.5
TPM1-219ENST00000559397 NOC4LQ9BVI4 516 aaKnown RBP18.15■□□□□ 0.5
TPM1-219ENST00000559397 CELF4Q9BZC1 486 aaKnown RBP18.15■□□□□ 0.5
TPM1-219ENST00000559397 RTN4Q9NQC3 1192 aaKnown RBP18.15■□□□□ 0.5
TPM1-219ENST00000559397 ARHGAP28Q9P2N2 729 aa18.15■□□□□ 0.5
TPM1-219ENST00000559397 TRPV2Q9Y5S1 764 aa18.15■□□□□ 0.5
TPM1-219ENST00000559397 CDY2AQ9Y6F7 541 aa18.15■□□□□ 0.5
TPM1-219ENST00000559397 LRRIQ4A6NIV6 560 aa18.15■□□□□ 0.5
TPM1-219ENST00000559397 SLC16A4O15374 487 aa18.15■□□□□ 0.5
TPM1-219ENST00000559397 CTSHP09668 335 aa18.15■□□□□ 0.5
TPM1-219ENST00000559397 CRYBB1P53674 252 aaPredicted RBP18.15■□□□□ 0.5
TPM1-219ENST00000559397 SMTNP53814 917 aa18.15■□□□□ 0.5
TPM1-219ENST00000559397 GSDMDP57764 484 aa18.15■□□□□ 0.5
TPM1-219ENST00000559397 PTENP60484 403 aa18.15■□□□□ 0.5
TPM1-219ENST00000559397 ZNF618Q5T7W0 954 aa18.15■□□□□ 0.5
TPM1-219ENST00000559397 FILIP1Q7Z7B0 1213 aa18.15■□□□□ 0.5
TPM1-219ENST00000559397 TMEM161BQ8NDZ6 487 aa18.15■□□□□ 0.5
TPM1-219ENST00000559397 NLRP7Q8WX94 980 aa18.15■□□□□ 0.5
TPM1-219ENST00000559397 OSMRQ99650 979 aa18.15■□□□□ 0.5
TPM1-219ENST00000559397 STRA6Q9BX79 667 aa18.15■□□□□ 0.5
TPM1-219ENST00000559397 ST6GALNAC4Q9H4F1 302 aa18.15■□□□□ 0.5
TPM1-219ENST00000559397 MRPL44Q9H9J2 332 aaKnown RBP18.15■□□□□ 0.5
TPM1-219ENST00000559397 PITPNM1O00562 1244 aa18.14■□□□□ 0.49
TPM1-219ENST00000559397 PPP1R37O75864 691 aa18.14■□□□□ 0.49
TPM1-219ENST00000559397 KIF20AO95235 890 aa18.14■□□□□ 0.49
TPM1-219ENST00000559397 PBX1P40424 430 aa18.14■□□□□ 0.49
TPM1-219ENST00000559397 CASP5P51878 434 aa18.14■□□□□ 0.49
TPM1-219ENST00000559397 COPB1P53618 953 aaKnown RBP18.14■□□□□ 0.49
TPM1-219ENST00000559397 BFSP2Q13515 415 aa18.14■□□□□ 0.49
TPM1-219ENST00000559397 CCDC155Q8N6L0 562 aa18.14■□□□□ 0.49
TPM1-219ENST00000559397 SLC17A8Q8NDX2 589 aa18.14■□□□□ 0.49
TPM1-219ENST00000559397 ANKRD20A12PQ8NF67 263 aa18.14■□□□□ 0.49
TPM1-219ENST00000559397 DEPTORQ8TB45 409 aa18.14■□□□□ 0.49
TPM1-219ENST00000559397 MINDY3Q9H8M7 445 aa18.14■□□□□ 0.49
TPM1-219ENST00000559397 TMEM39AQ9NV64 488 aa18.14■□□□□ 0.49
TPM1-219ENST00000559397 K7ENM7 598 aa18.13■□□□□ 0.49
TPM1-219ENST00000559397 MYBP10242 640 aa18.13■□□□□ 0.49
TPM1-219ENST00000559397 PHKA2P46019 1235 aa18.13■□□□□ 0.49
TPM1-219ENST00000559397 BMT2Q1RMZ1 405 aa18.13■□□□□ 0.49
TPM1-219ENST00000559397 FILIP1LQ4L180 1135 aa18.13■□□□□ 0.49
TPM1-219ENST00000559397 TAS1R3Q7RTX0 852 aa18.13■□□□□ 0.49
TPM1-219ENST00000559397 HAUS6Q7Z4H7 955 aa18.13■□□□□ 0.49
TPM1-219ENST00000559397 CACTINQ8WUQ7 758 aaKnown RBP18.13■□□□□ 0.49
TPM1-219ENST00000559397 TMEM40Q8WWA1 233 aa18.13■□□□□ 0.49
TPM1-219ENST00000559397 KCTD10Q9H3F6 313 aa18.13■□□□□ 0.49
TPM1-219ENST00000559397 GINS2Q9Y248 185 aa18.13■□□□□ 0.49
TPM1-219ENST00000559397 UMODL1Q5DID0 1318 aa18.13■□□□□ 0.49
TPM1-219ENST00000559397 M0QZ92 97 aa18.12■□□□□ 0.49
TPM1-219ENST00000559397 KIAA0355O15063 1070 aa18.12■□□□□ 0.49
TPM1-219ENST00000559397 TEX33O43247 280 aa18.12■□□□□ 0.49
TPM1-219ENST00000559397 DARSP14868 501 aaKnown RBP18.12■□□□□ 0.49
TPM1-219ENST00000559397 SELPP16109 830 aa18.12■□□□□ 0.49
TPM1-219ENST00000559397 GTF2BQ00403 316 aa18.12■□□□□ 0.49
TPM1-219ENST00000559397 MBTD1Q05BQ5 628 aa18.12■□□□□ 0.49
TPM1-219ENST00000559397 TBX2Q13207 712 aaPredicted RBP18.12■□□□□ 0.49
TPM1-219ENST00000559397 ZC2HC1CQ53FD0 456 aaPredicted RBP18.12■□□□□ 0.49
TPM1-219ENST00000559397 SRGAP1Q7Z6B7 1085 aa18.12■□□□□ 0.49
TPM1-219ENST00000559397 FAM114A1Q8IWE2 563 aa18.12■□□□□ 0.49
TPM1-219ENST00000559397 ZBTB8OSQ8IWT0 167 aa18.12■□□□□ 0.49
TPM1-219ENST00000559397 LRRC8AQ8IWT6 810 aa18.12■□□□□ 0.49
TPM1-219ENST00000559397 GCOM2Q9BZD3 368 aaPredicted RBP18.12■□□□□ 0.49
TPM1-219ENST00000559397 CCDC113Q9H0I3 377 aa18.12■□□□□ 0.49
TPM1-219ENST00000559397 C2orf40Q9H1Z8 148 aa18.12■□□□□ 0.49
TPM1-219ENST00000559397 HIPK3Q9H422 1215 aa18.12■□□□□ 0.49
TPM1-219ENST00000559397 TMEM134Q9H6X4 195 aa18.12■□□□□ 0.49
TPM1-219ENST00000559397 DENND3A2RUS2 1198 aa18.12■□□□□ 0.49
TPM1-219ENST00000559397 TRIM43BA6NCK2 446 aa18.12■□□□□ 0.49
TPM1-219ENST00000559397 H0YCG3 227 aa18.12■□□□□ 0.49
TPM1-219ENST00000559397 GCNT3O95395 438 aa18.12■□□□□ 0.49
TPM1-219ENST00000559397 FGFR1OPO95684 399 aaKnown RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms