RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 JPH1Q9HDC5 661 aaPredicted RBP11.15□□□□□ -0.62
HNRNPC-228ENST00000557033 PCDH12Q9NPG4 1184 aa11.15□□□□□ -0.62
HNRNPC-228ENST00000557033 ABI2Q9NYB9 513 aaPredicted RBP11.15□□□□□ -0.62
HNRNPC-228ENST00000557033 TELO2Q9Y4R8 837 aa11.15□□□□□ -0.62
HNRNPC-228ENST00000557033 CYP46A1Q9Y6A2 500 aa11.15□□□□□ -0.62
HNRNPC-228ENST00000557033 WASF2Q9Y6W5 498 aa11.15□□□□□ -0.62
HNRNPC-228ENST00000557033 A0A1W2PP55 124 aa11.14□□□□□ -0.63
HNRNPC-228ENST00000557033 DLL1O00548 723 aa11.14□□□□□ -0.63
HNRNPC-228ENST00000557033 GREM1O60565 184 aa11.14□□□□□ -0.63
HNRNPC-228ENST00000557033 RPLP2P05387 115 aaKnown RBP11.14□□□□□ -0.63
HNRNPC-228ENST00000557033 ARP10275 920 aa11.14□□□□□ -0.63
HNRNPC-228ENST00000557033 MYOGP15173 224 aa11.14□□□□□ -0.63
HNRNPC-228ENST00000557033 WDR5P61964 334 aaKnown RBP11.14□□□□□ -0.63
HNRNPC-228ENST00000557033 MBTPS1Q14703 1052 aa11.14□□□□□ -0.63
HNRNPC-228ENST00000557033 PKN1Q16512 942 aa11.14□□□□□ -0.63
HNRNPC-228ENST00000557033 TAF2Q6P1X5 1199 aa11.14□□□□□ -0.63
HNRNPC-228ENST00000557033 PLPPR4Q7Z2D5 763 aa11.14□□□□□ -0.63
HNRNPC-228ENST00000557033 CYP2W1Q8TAV3 490 aa11.14□□□□□ -0.63
HNRNPC-228ENST00000557033 BICD2Q8TD16 824 aa11.14□□□□□ -0.63
HNRNPC-228ENST00000557033 HNRNPLLQ8WVV9 542 aaKnown RBP11.14□□□□□ -0.63
HNRNPC-228ENST00000557033 ZNF274Q96GC6 653 aaPredicted RBP11.14□□□□□ -0.63
HNRNPC-228ENST00000557033 AZI2Q9H6S1 392 aa11.14□□□□□ -0.63
HNRNPC-228ENST00000557033 ZFAND3Q9H8U3 227 aa11.14□□□□□ -0.63
HNRNPC-228ENST00000557033 AGO4Q9HCK5 861 aaKnown RBP11.14□□□□□ -0.63
HNRNPC-228ENST00000557033 TMEM260Q9NX78 707 aa11.14□□□□□ -0.63
HNRNPC-228ENST00000557033 SLC9A2Q9UBY0 812 aa11.14□□□□□ -0.63
HNRNPC-228ENST00000557033 PRKAG3Q9UGI9 489 aa11.14□□□□□ -0.63
HNRNPC-228ENST00000557033 TET1Q8NFU7 2136 aa11.14□□□□□ -0.63
HNRNPC-228ENST00000557033 KAT6AQ92794 2004 aa11.13□□□□□ -0.63
HNRNPC-228ENST00000557033 RRN3P2A6NIE6 340 aa11.13□□□□□ -0.63
HNRNPC-228ENST00000557033 DNAJC6O75061 913 aa11.13□□□□□ -0.63
HNRNPC-228ENST00000557033 XYLBO75191 536 aa11.13□□□□□ -0.63
HNRNPC-228ENST00000557033 CA3P07451 260 aa11.13□□□□□ -0.63
HNRNPC-228ENST00000557033 POU3F3P20264 500 aaPredicted RBP11.13□□□□□ -0.63
HNRNPC-228ENST00000557033 GARTP22102 1010 aa11.13□□□□□ -0.63
HNRNPC-228ENST00000557033 PHKA2P46019 1235 aa11.13□□□□□ -0.63
HNRNPC-228ENST00000557033 SLC26A2P50443 739 aa11.13□□□□□ -0.63
HNRNPC-228ENST00000557033 TOB2Q14106 344 aaPredicted RBP11.13□□□□□ -0.63
HNRNPC-228ENST00000557033 JAKMIP3Q5VZ66 844 aa11.13□□□□□ -0.63
HNRNPC-228ENST00000557033 RSPH3Q86UC2 560 aa11.13□□□□□ -0.63
HNRNPC-228ENST00000557033 REXO1Q8N1G1 1221 aaKnown RBP11.13□□□□□ -0.63
HNRNPC-228ENST00000557033 CCDC148Q8NFR7 591 aa11.13□□□□□ -0.63
HNRNPC-228ENST00000557033 DBF4BQ8NFT6 615 aa11.13□□□□□ -0.63
HNRNPC-228ENST00000557033 LMBR1Q8WVP7 490 aa11.13□□□□□ -0.63
HNRNPC-228ENST00000557033 CRYGNQ8WXF5 182 aa11.13□□□□□ -0.63
HNRNPC-228ENST00000557033 SEPT8Q92599 483 aa11.13□□□□□ -0.63
HNRNPC-228ENST00000557033 PHKBQ93100 1093 aa11.13□□□□□ -0.63
HNRNPC-228ENST00000557033 PGBD1Q96JS3 809 aa11.13□□□□□ -0.63
HNRNPC-228ENST00000557033 RHOVQ96L33 236 aa11.13□□□□□ -0.63
HNRNPC-228ENST00000557033 RAD9AQ99638 391 aa11.13□□□□□ -0.63
HNRNPC-228ENST00000557033 SH3GLB2Q9NR46 395 aa11.13□□□□□ -0.63
HNRNPC-228ENST00000557033 PKD2L1Q9P0L9 805 aa11.13□□□□□ -0.63
HNRNPC-228ENST00000557033 PPM1HQ9ULR3 514 aa11.13□□□□□ -0.63
HNRNPC-228ENST00000557033 MBLAC1A4D2B0 266 aaPredicted RBP11.12□□□□□ -0.63
HNRNPC-228ENST00000557033 GJB5O95377 273 aa11.12□□□□□ -0.63
HNRNPC-228ENST00000557033 AMHP03971 560 aa11.12□□□□□ -0.63
HNRNPC-228ENST00000557033 CES1P23141 567 aa11.12□□□□□ -0.63
HNRNPC-228ENST00000557033 STAT5BP51692 787 aa11.12□□□□□ -0.63
HNRNPC-228ENST00000557033 ACTR2P61160 394 aa11.12□□□□□ -0.63
HNRNPC-228ENST00000557033 CCT2P78371 535 aaKnown RBP11.12□□□□□ -0.63
HNRNPC-228ENST00000557033 TAP1Q03518 808 aa11.12□□□□□ -0.63
HNRNPC-228ENST00000557033 PPFIA1Q13136 1202 aa11.12□□□□□ -0.63
HNRNPC-228ENST00000557033 ITGB3BPQ13352 177 aaPredicted RBP11.12□□□□□ -0.63
HNRNPC-228ENST00000557033 ADGRE1Q14246 886 aa11.12□□□□□ -0.63
HNRNPC-228ENST00000557033 GRIK4Q16099 956 aa11.12□□□□□ -0.63
HNRNPC-228ENST00000557033 CPLX2Q6PUV4 134 aaKnown RBP11.12□□□□□ -0.63
HNRNPC-228ENST00000557033 SV2BQ7L1I2 683 aa11.12□□□□□ -0.63
HNRNPC-228ENST00000557033 PLA2G4DQ86XP0 818 aa11.12□□□□□ -0.63
HNRNPC-228ENST00000557033 TRIM22Q8IYM9 498 aa11.12□□□□□ -0.63
HNRNPC-228ENST00000557033 CPLX3Q8WVH0 158 aa11.12□□□□□ -0.63
HNRNPC-228ENST00000557033 APBB2Q92870 758 aa11.12□□□□□ -0.63
HNRNPC-228ENST00000557033 PCYT2Q99447 389 aa11.12□□□□□ -0.63
HNRNPC-228ENST00000557033 SLC26A6Q9BXS9 759 aa11.12□□□□□ -0.63
HNRNPC-228ENST00000557033 KLHL42Q9P2K6 505 aa11.12□□□□□ -0.63
HNRNPC-228ENST00000557033 IGLV3-22A0A075B6J6 115 aa11.11□□□□□ -0.63
HNRNPC-228ENST00000557033 IGKV6D-21A0A0A0MT36 114 aa11.11□□□□□ -0.63
HNRNPC-228ENST00000557033 FAM86B1E9PN63 330 aa11.11□□□□□ -0.63
HNRNPC-228ENST00000557033 FAM86B2P0C5J1 330 aa11.11□□□□□ -0.63
HNRNPC-228ENST00000557033 INSRRP14616 1297 aa11.11□□□□□ -0.63
HNRNPC-228ENST00000557033 MARK3P27448 753 aa11.11□□□□□ -0.63
HNRNPC-228ENST00000557033 CIITAP33076 1130 aa11.11□□□□□ -0.63
HNRNPC-228ENST00000557033 USP11P51784 963 aa11.11□□□□□ -0.63
HNRNPC-228ENST00000557033 DEFB103AP81534 67 aa11.11□□□□□ -0.63
HNRNPC-228ENST00000557033 SETQ01105 290 aaPredicted RBP11.11□□□□□ -0.63
HNRNPC-228ENST00000557033 SSRP1Q08945 709 aaKnown RBP11.11□□□□□ -0.63
HNRNPC-228ENST00000557033 TCTN1Q2MV58 587 aa11.11□□□□□ -0.63
HNRNPC-228ENST00000557033 MARCH8Q5T0T0 291 aa11.11□□□□□ -0.63
HNRNPC-228ENST00000557033 ABHD15Q6UXT9 468 aa11.11□□□□□ -0.63
HNRNPC-228ENST00000557033 FAM43BQ6ZT52 329 aaPredicted RBP11.11□□□□□ -0.63
HNRNPC-228ENST00000557033 PHC3Q8NDX5 983 aa11.11□□□□□ -0.63
HNRNPC-228ENST00000557033 C22orf23Q9BZE7 217 aa11.11□□□□□ -0.63
HNRNPC-228ENST00000557033 C11orf16Q9NQ32 467 aa11.11□□□□□ -0.63
HNRNPC-228ENST00000557033 TBC1D22BQ9NU19 505 aa11.11□□□□□ -0.63
HNRNPC-228ENST00000557033 PDRG1Q9NUG6 133 aa11.11□□□□□ -0.63
HNRNPC-228ENST00000557033 TUBE1Q9UJT0 475 aa11.11□□□□□ -0.63
HNRNPC-228ENST00000557033 PRKAB1Q9Y478 270 aa11.11□□□□□ -0.63
HNRNPC-228ENST00000557033 INSL6Q9Y581 213 aa11.11□□□□□ -0.63
HNRNPC-228ENST00000557033 CHD9Q3L8U1 2897 aa11.11□□□□□ -0.63
HNRNPC-228ENST00000557033 IPO5O00410 1097 aaKnown RBP11.1□□□□□ -0.63
HNRNPC-228ENST00000557033 CPLX1O14810 134 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms