RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 ZC3H3Q8IXZ2 948 aaKnown RBP16.25■□□□□ 0.19
CHFR-223ENST00000544268 MMGT1Q8N4V1 131 aa16.25■□□□□ 0.19
CHFR-223ENST00000544268 ERMNQ8TAM6 284 aa16.25■□□□□ 0.19
CHFR-223ENST00000544268 ZNF526Q8TF50 670 aaPredicted RBP16.25■□□□□ 0.19
CHFR-223ENST00000544268 DDX39AO00148 427 aaKnown RBP16.25■□□□□ 0.19
CHFR-223ENST00000544268 TGFB1I1O43294 461 aa16.25■□□□□ 0.19
CHFR-223ENST00000544268 SLITRK3O94933 977 aa16.25■□□□□ 0.19
CHFR-223ENST00000544268 NR3C1P04150 777 aa16.25■□□□□ 0.19
CHFR-223ENST00000544268 BCRP11274 1271 aa16.25■□□□□ 0.19
CHFR-223ENST00000544268 PAX7P23759 505 aa16.25■□□□□ 0.19
CHFR-223ENST00000544268 PPARDQ03181 441 aa16.25■□□□□ 0.19
CHFR-223ENST00000544268 PPP2R5CQ13362 524 aa16.25■□□□□ 0.19
CHFR-223ENST00000544268 NAB2Q15742 525 aa16.25■□□□□ 0.19
CHFR-223ENST00000544268 CEP85LQ5SZL2 805 aa16.25■□□□□ 0.19
CHFR-223ENST00000544268 GPAT2Q6NUI2 795 aa16.25■□□□□ 0.19
CHFR-223ENST00000544268 RINT1Q6NUQ1 792 aa16.25■□□□□ 0.19
CHFR-223ENST00000544268 IQCDQ96DY2 449 aa16.25■□□□□ 0.19
CHFR-223ENST00000544268 GGA2Q9UJY4 613 aa16.25■□□□□ 0.19
CHFR-223ENST00000544268 LRRN2O75325 713 aa16.24■□□□□ 0.19
CHFR-223ENST00000544268 FAM153BP0C7A2 387 aa16.24■□□□□ 0.19
CHFR-223ENST00000544268 FAM153CQ494X1 144 aa16.24■□□□□ 0.19
CHFR-223ENST00000544268 TTC19Q6DKK2 380 aaPredicted RBP16.24■□□□□ 0.19
CHFR-223ENST00000544268 FASTKD5Q7L8L6 764 aaKnown RBP16.24■□□□□ 0.19
CHFR-223ENST00000544268 NIPA1Q7RTP0 329 aa16.24■□□□□ 0.19
CHFR-223ENST00000544268 MAGEC3Q8TD91 643 aa16.24■□□□□ 0.19
CHFR-223ENST00000544268 UNC45AQ9H3U1 944 aa16.24■□□□□ 0.19
CHFR-223ENST00000544268 SIX2Q9NPC8 291 aa16.24■□□□□ 0.19
CHFR-223ENST00000544268 FAM153AQ9UHL3 310 aa16.24■□□□□ 0.19
CHFR-223ENST00000544268 ZMYM2Q9UBW7 1377 aa16.24■□□□□ 0.19
CHFR-223ENST00000544268 SLC26A4O43511 780 aa16.24■□□□□ 0.19
CHFR-223ENST00000544268 TCP1P17987 556 aaKnown RBP16.24■□□□□ 0.19
CHFR-223ENST00000544268 SNAPC2Q13487 334 aa16.24■□□□□ 0.19
CHFR-223ENST00000544268 EDRF1Q3B7T1 1238 aa16.24■□□□□ 0.19
CHFR-223ENST00000544268 CCDC50Q8IVM0 306 aa16.24■□□□□ 0.19
CHFR-223ENST00000544268 SLC35C1Q96A29 364 aa16.24■□□□□ 0.19
CHFR-223ENST00000544268 TRIM6Q9C030 488 aaPredicted RBP16.24■□□□□ 0.19
CHFR-223ENST00000544268 SPATC1LQ9H0A9 340 aa16.24■□□□□ 0.19
CHFR-223ENST00000544268 AIPL1Q9NZN9 384 aa16.24■□□□□ 0.19
CHFR-223ENST00000544268 TRAF3IP3Q9Y228 551 aa16.24■□□□□ 0.19
CHFR-223ENST00000544268 A0A1B0GUA9 196 aa16.23■□□□□ 0.19
CHFR-223ENST00000544268 CNMDO75829 334 aa16.23■□□□□ 0.19
CHFR-223ENST00000544268 CELF2O95319 508 aaKnown RBP16.23■□□□□ 0.19
CHFR-223ENST00000544268 GNA14O95837 355 aa16.23■□□□□ 0.19
CHFR-223ENST00000544268 AFPP02771 609 aaKnown RBP16.23■□□□□ 0.19
CHFR-223ENST00000544268 CARSP49589 748 aaKnown RBP16.23■□□□□ 0.19
CHFR-223ENST00000544268 CDR1P51861 262 aa16.23■□□□□ 0.19
CHFR-223ENST00000544268 MKRN3Q13064 507 aaKnown RBP16.23■□□□□ 0.19
CHFR-223ENST00000544268 DRP2Q13474 957 aa16.23■□□□□ 0.19
CHFR-223ENST00000544268 MTMR1Q13613 665 aa16.23■□□□□ 0.19
CHFR-223ENST00000544268 EPHA7Q15375 998 aa16.23■□□□□ 0.19
CHFR-223ENST00000544268 EXOC3L4Q17RC7 722 aa16.23■□□□□ 0.19
CHFR-223ENST00000544268 ALS2CLQ60I27 953 aa16.23■□□□□ 0.19
CHFR-223ENST00000544268 RIOX2Q8IUF8 465 aa16.23■□□□□ 0.19
CHFR-223ENST00000544268 CHST13Q8NET6 341 aa16.23■□□□□ 0.19
CHFR-223ENST00000544268 SPAG5Q96R06 1193 aa16.23■□□□□ 0.19
CHFR-223ENST00000544268 TEKT3Q9BXF9 490 aa16.23■□□□□ 0.19
CHFR-223ENST00000544268 R3HDMLQ9H3Y0 253 aa16.23■□□□□ 0.19
CHFR-223ENST00000544268 GBA2Q9HCG7 927 aaPredicted RBP16.23■□□□□ 0.19
CHFR-223ENST00000544268 TXNRD2Q9NNW7 524 aa16.23■□□□□ 0.19
CHFR-223ENST00000544268 TISP43B9A030 160 aa16.23■□□□□ 0.19
CHFR-223ENST00000544268 RTN2O75298 545 aa16.23■□□□□ 0.19
CHFR-223ENST00000544268 NR3C2P08235 984 aa16.23■□□□□ 0.19
CHFR-223ENST00000544268 XRCC5P13010 732 aaKnown RBP16.23■□□□□ 0.19
CHFR-223ENST00000544268 ITGB3BPQ13352 177 aaPredicted RBP16.23■□□□□ 0.19
CHFR-223ENST00000544268 PDCLQ13371 301 aa16.23■□□□□ 0.19
CHFR-223ENST00000544268 B3GNT9Q6UX72 402 aa16.23■□□□□ 0.19
CHFR-223ENST00000544268 MYCT1Q8N699 235 aa16.23■□□□□ 0.19
CHFR-223ENST00000544268 RDH13Q8NBN7 331 aa16.23■□□□□ 0.19
CHFR-223ENST00000544268 NSUN6Q8TEA1 469 aaKnown RBP16.23■□□□□ 0.19
CHFR-223ENST00000544268 RUBCNQ92622 972 aa16.23■□□□□ 0.19
CHFR-223ENST00000544268 RIT2Q99578 217 aa16.23■□□□□ 0.19
CHFR-223ENST00000544268 HSD17B14Q9BPX1 270 aa16.23■□□□□ 0.19
CHFR-223ENST00000544268 POLR3CQ9BUI4 534 aaPredicted RBP16.23■□□□□ 0.19
CHFR-223ENST00000544268 EDEM3Q9BZQ6 932 aa16.23■□□□□ 0.19
CHFR-223ENST00000544268 AGO4Q9HCK5 861 aaKnown RBP16.23■□□□□ 0.19
CHFR-223ENST00000544268 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.23■□□□□ 0.19
CHFR-223ENST00000544268 GCNT4Q9P109 453 aa16.23■□□□□ 0.19
CHFR-223ENST00000544268 LCTP09848 1927 aa16.22■□□□□ 0.19
CHFR-223ENST00000544268 TESPA1A2RU30 521 aaPredicted RBP16.22■□□□□ 0.19
CHFR-223ENST00000544268 TBCAO75347 108 aaKnown RBP16.22■□□□□ 0.19
CHFR-223ENST00000544268 TRIM49P0CI25 452 aa16.22■□□□□ 0.19
CHFR-223ENST00000544268 TRIM49CP0CI26 452 aa16.22■□□□□ 0.19
CHFR-223ENST00000544268 PRLRP16471 622 aa16.22■□□□□ 0.19
CHFR-223ENST00000544268 CCDC70Q6NSX1 233 aa16.22■□□□□ 0.19
CHFR-223ENST00000544268 C8orf74Q6P047 294 aa16.22■□□□□ 0.19
CHFR-223ENST00000544268 FOXR2Q6PJQ5 311 aa16.22■□□□□ 0.19
CHFR-223ENST00000544268 ZNF572Q7Z3I7 529 aaPredicted RBP16.22■□□□□ 0.19
CHFR-223ENST00000544268 VSIG10LQ86VR7 867 aa16.22■□□□□ 0.19
CHFR-223ENST00000544268 NCAPG2Q86XI2 1143 aa16.22■□□□□ 0.19
CHFR-223ENST00000544268 CCDC13Q8IYE1 715 aa16.22■□□□□ 0.19
CHFR-223ENST00000544268 IFT81Q8WYA0 676 aa16.22■□□□□ 0.19
CHFR-223ENST00000544268 KRT12Q99456 494 aa16.22■□□□□ 0.19
CHFR-223ENST00000544268 EPN3Q9H201 632 aa16.22■□□□□ 0.19
CHFR-223ENST00000544268 SLC40A1Q9NP59 571 aa16.22■□□□□ 0.19
CHFR-223ENST00000544268 STIM2Q9P246 746 aa16.22■□□□□ 0.19
CHFR-223ENST00000544268 STK24Q9Y6E0 443 aa16.22■□□□□ 0.19
CHFR-223ENST00000544268 DHX15O43143 795 aaKnown RBP16.21■□□□□ 0.19
CHFR-223ENST00000544268 NAA35Q5VZE5 725 aa16.21■□□□□ 0.19
CHFR-223ENST00000544268 IQCEQ6IPM2 695 aa16.21■□□□□ 0.19
CHFR-223ENST00000544268 ANKRD35Q8N283 1001 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms