RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 TGM5O43548 720 aa7.63□□□□□ -1.19
CCDC7-209ENST00000539197 ALDH1A2O94788 518 aa7.63□□□□□ -1.19
CCDC7-209ENST00000539197 KCNV1Q6PIU1 500 aa7.63□□□□□ -1.19
CCDC7-209ENST00000539197 PPP1R14CQ8TAE6 165 aa7.63□□□□□ -1.19
CCDC7-209ENST00000539197 FAM193BQ96PV7 902 aaPredicted RBP7.63□□□□□ -1.19
CCDC7-209ENST00000539197 MTFR1LQ9H019 292 aa7.63□□□□□ -1.19
CCDC7-209ENST00000539197 EPC1Q9H2F5 836 aa7.63□□□□□ -1.19
CCDC7-209ENST00000539197 THG1LQ9NWX6 298 aaKnown RBP7.63□□□□□ -1.19
CCDC7-209ENST00000539197 TMEM260Q9NX78 707 aa7.63□□□□□ -1.19
CCDC7-209ENST00000539197 TRIM24O15164 1050 aa7.62□□□□□ -1.19
CCDC7-209ENST00000539197 LRRC55Q6ZSA7 311 aa7.62□□□□□ -1.19
CCDC7-209ENST00000539197 UNC5BQ8IZJ1 945 aa7.62□□□□□ -1.19
CCDC7-209ENST00000539197 CPPED1Q9BRF8 314 aaPredicted RBP7.62□□□□□ -1.19
CCDC7-209ENST00000539197 FDXACB1Q9BRP7 624 aaPredicted RBP7.62□□□□□ -1.19
CCDC7-209ENST00000539197 ZSWIM4Q9H7M6 989 aa7.62□□□□□ -1.19
CCDC7-209ENST00000539197 USP18Q9UMW8 372 aa7.62□□□□□ -1.19
CCDC7-209ENST00000539197 CD2APQ9Y5K6 639 aa7.62□□□□□ -1.19
CCDC7-209ENST00000539197 SCAF4O95104 1147 aaKnown RBP7.61□□□□□ -1.19
CCDC7-209ENST00000539197 LY86O95711 162 aa7.61□□□□□ -1.19
CCDC7-209ENST00000539197 F2P00734 622 aa7.61□□□□□ -1.19
CCDC7-209ENST00000539197 GYPEP15421 78 aa7.61□□□□□ -1.19
CCDC7-209ENST00000539197 CD40P25942 277 aa7.61□□□□□ -1.19
CCDC7-209ENST00000539197 FAM189BP81408 668 aa7.61□□□□□ -1.19
CCDC7-209ENST00000539197 DSG1Q02413 1049 aa7.61□□□□□ -1.19
CCDC7-209ENST00000539197 MSL3Q8N5Y2 521 aaKnown RBP7.61□□□□□ -1.19
CCDC7-209ENST00000539197 OR5M3Q8NGP4 307 aa7.61□□□□□ -1.19
CCDC7-209ENST00000539197 MRFAP1L1Q96HT8 127 aa7.61□□□□□ -1.19
CCDC7-209ENST00000539197 PDCD2LQ9BRP1 358 aa7.61□□□□□ -1.19
CCDC7-209ENST00000539197 LSM14BQ9BX40 385 aaKnown RBP7.61□□□□□ -1.19
CCDC7-209ENST00000539197 IFT57Q9NWB7 429 aa7.61□□□□□ -1.19
CCDC7-209ENST00000539197 MAGEC2Q9UBF1 373 aaPredicted RBP7.61□□□□□ -1.19
CCDC7-209ENST00000539197 PACSIN3Q9UKS6 424 aa7.61□□□□□ -1.19
CCDC7-209ENST00000539197 AHRRA9YTQ3 701 aa7.6□□□□□ -1.19
CCDC7-209ENST00000539197 RFPL3O75679 317 aa7.6□□□□□ -1.19
CCDC7-209ENST00000539197 ADRA1BP35368 520 aa7.6□□□□□ -1.19
CCDC7-209ENST00000539197 NEK4P51957 841 aa7.6□□□□□ -1.19
CCDC7-209ENST00000539197 TIGD2Q4W5G0 525 aa7.6□□□□□ -1.19
CCDC7-209ENST00000539197 PLEKHG4Q58EX7 1191 aa7.6□□□□□ -1.19
CCDC7-209ENST00000539197 METTL24Q5JXM2 366 aa7.6□□□□□ -1.19
CCDC7-209ENST00000539197 XYLT1Q86Y38 959 aa7.6□□□□□ -1.19
CCDC7-209ENST00000539197 PASD1Q8IV76 773 aa7.6□□□□□ -1.19
CCDC7-209ENST00000539197 GLB1L3Q8NCI6 653 aaPredicted RBP7.6□□□□□ -1.19
CCDC7-209ENST00000539197 ORAI3Q9BRQ5 295 aa7.6□□□□□ -1.19
CCDC7-209ENST00000539197 EIF2B4Q9UI10 523 aaKnown RBP7.6□□□□□ -1.19
CCDC7-209ENST00000539197 MSRAQ9UJ68 235 aa7.6□□□□□ -1.19
CCDC7-209ENST00000539197 PCDHB6Q9Y5E3 794 aa7.6□□□□□ -1.19
CCDC7-209ENST00000539197 HS3ST4Q9Y661 456 aa7.6□□□□□ -1.19
CCDC7-209ENST00000539197 GRID2IPA4D2P6 1211 aa7.59□□□□□ -1.19
CCDC7-209ENST00000539197 LPXNO60711 386 aa7.59□□□□□ -1.19
CCDC7-209ENST00000539197 GAS7O60861 476 aa7.59□□□□□ -1.19
CCDC7-209ENST00000539197 NUDT3O95989 172 aa7.59□□□□□ -1.19
CCDC7-209ENST00000539197 LMNAP02545 664 aaKnown RBP7.59□□□□□ -1.19
CCDC7-209ENST00000539197 LRRC32Q14392 662 aa7.59□□□□□ -1.19
CCDC7-209ENST00000539197 PCBP1Q15365 356 aaKnown RBP eCLIP7.59□□□□□ -1.19
CCDC7-209ENST00000539197 FAM83AQ86UY5 434 aa7.59□□□□□ -1.19
CCDC7-209ENST00000539197 INTS7Q9NVH2 962 aaKnown RBP7.59□□□□□ -1.19
CCDC7-209ENST00000539197 PCSK5Q92824 1860 aa7.58□□□□□ -1.2
CCDC7-209ENST00000539197 B3GALT2O43825 422 aa7.58□□□□□ -1.2
CCDC7-209ENST00000539197 DNAJC6O75061 913 aa7.58□□□□□ -1.2
CCDC7-209ENST00000539197 PFKMP08237 780 aa7.58□□□□□ -1.2
CCDC7-209ENST00000539197 LAG3P18627 525 aa7.58□□□□□ -1.2
CCDC7-209ENST00000539197 APOBEC3AP31941 199 aaPredicted RBP7.58□□□□□ -1.2
CCDC7-209ENST00000539197 TKFCQ3LXA3 575 aa7.58□□□□□ -1.2
CCDC7-209ENST00000539197 ESPNLQ6ZVH7 1005 aa7.58□□□□□ -1.2
CCDC7-209ENST00000539197 KIF18BQ86Y91 864 aa7.58□□□□□ -1.2
CCDC7-209ENST00000539197 EFHBQ8N7U6 833 aa7.58□□□□□ -1.2
CCDC7-209ENST00000539197 CDYL2Q8N8U2 506 aa7.58□□□□□ -1.2
CCDC7-209ENST00000539197 OR52N2Q8NGI0 321 aa7.58□□□□□ -1.2
CCDC7-209ENST00000539197 KCNH6Q9H252 994 aa7.58□□□□□ -1.2
CCDC7-209ENST00000539197 PIF1Q9H611 641 aa7.58□□□□□ -1.2
CCDC7-209ENST00000539197 HDAC5Q9UQL6 1122 aa7.58□□□□□ -1.2
CCDC7-209ENST00000539197 ST20-MTHFSA0A0A6YYL1 179 aa7.57□□□□□ -1.2
CCDC7-209ENST00000539197 CENPVL1A0A0U1RR11 272 aa7.57□□□□□ -1.2
CCDC7-209ENST00000539197 PRSS38A1L453 326 aa7.57□□□□□ -1.2
CCDC7-209ENST00000539197 SEC24DO94855 1032 aaPredicted RBP7.57□□□□□ -1.2
CCDC7-209ENST00000539197 WNT3AP56704 352 aa7.57□□□□□ -1.2
CCDC7-209ENST00000539197 VPS72Q15906 364 aa7.57□□□□□ -1.2
CCDC7-209ENST00000539197 CSRP2Q16527 193 aa7.57□□□□□ -1.2
CCDC7-209ENST00000539197 CCDC144BQ3MJ40 725 aa7.57□□□□□ -1.2
CCDC7-209ENST00000539197 IQSEC1Q6DN90 963 aa7.57□□□□□ -1.2
CCDC7-209ENST00000539197 CNNM4Q6P4Q7 775 aa7.57□□□□□ -1.2
CCDC7-209ENST00000539197 SREK1Q8WXA9 508 aaKnown RBP7.57□□□□□ -1.2
CCDC7-209ENST00000539197 FERMT2Q96AC1 680 aa7.57□□□□□ -1.2
CCDC7-209ENST00000539197 IL17RAQ96F46 866 aa7.57□□□□□ -1.2
CCDC7-209ENST00000539197 PRDM12Q9H4Q4 367 aa7.57□□□□□ -1.2
CCDC7-209ENST00000539197 USP36Q9P275 1121 aaKnown RBP7.57□□□□□ -1.2
CCDC7-209ENST00000539197 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.57□□□□□ -1.2
CCDC7-209ENST00000539197 COL4A3Q01955 1670 aa7.57□□□□□ -1.2
CCDC7-209ENST00000539197 LEFTY2O00292 366 aa7.56□□□□□ -1.2
CCDC7-209ENST00000539197 MRPL49Q13405 166 aaKnown RBP7.56□□□□□ -1.2
CCDC7-209ENST00000539197 LRRTM3Q86VH5 581 aa7.56□□□□□ -1.2
CCDC7-209ENST00000539197 LILRA3Q8N6C8 439 aaPredicted RBP7.56□□□□□ -1.2
CCDC7-209ENST00000539197 BEND2Q8NDZ0 799 aa7.56□□□□□ -1.2
CCDC7-209ENST00000539197 GAB3Q8WWW8 586 aa7.56□□□□□ -1.2
CCDC7-209ENST00000539197 GPR101Q96P66 508 aaPredicted RBP7.56□□□□□ -1.2
CCDC7-209ENST00000539197 NDC1Q9BTX1 674 aa7.56□□□□□ -1.2
CCDC7-209ENST00000539197 SLC46A2Q9BY10 475 aa7.56□□□□□ -1.2
CCDC7-209ENST00000539197 TEX101Q9BY14 249 aa7.56□□□□□ -1.2
CCDC7-209ENST00000539197 SPTLC3Q9NUV7 552 aa7.56□□□□□ -1.2
CCDC7-209ENST00000539197 ZNHIT2Q9UHR6 403 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms