RNA–Protein interactions for RNA: ENST00000528088.1

CCDC84-205, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-205ENST00000528088 TMEM143Q96AN5 459 aa12.21□□□□□ -0.45
CCDC84-205ENST00000528088 NLRP4Q96MN2 994 aa12.21□□□□□ -0.45
CCDC84-205ENST00000528088 MMTAG2Q9BU76 263 aaKnown RBP12.21□□□□□ -0.45
CCDC84-205ENST00000528088 VRTNQ9H8Y1 702 aa12.21□□□□□ -0.45
CCDC84-205ENST00000528088 FAM13BQ9NYF5 915 aa12.21□□□□□ -0.45
CCDC84-205ENST00000528088 DBR1Q9UK59 544 aaKnown RBP12.21□□□□□ -0.45
CCDC84-205ENST00000528088 CHD9Q3L8U1 2897 aa12.21□□□□□ -0.45
CCDC84-205ENST00000528088 SIP14410 1827 aa12.21□□□□□ -0.45
CCDC84-205ENST00000528088 A0A0C4DFX4 3053 aa12.21□□□□□ -0.46
CCDC84-205ENST00000528088 GOLGA6L4A6NEF3 574 aa12.21□□□□□ -0.46
CCDC84-205ENST00000528088 SLC26A4O43511 780 aa12.21□□□□□ -0.46
CCDC84-205ENST00000528088 GAS2O43903 313 aaKnown RBP12.21□□□□□ -0.46
CCDC84-205ENST00000528088 EYA4O95677 639 aa12.21□□□□□ -0.46
CCDC84-205ENST00000528088 CXCL10P02778 98 aa12.21□□□□□ -0.46
CCDC84-205ENST00000528088 KRT18P05783 430 aaKnown RBP12.21□□□□□ -0.46
CCDC84-205ENST00000528088 GHRP10912 638 aa12.21□□□□□ -0.46
CCDC84-205ENST00000528088 ACTN1P12814 892 aa12.21□□□□□ -0.46
CCDC84-205ENST00000528088 STAT6P42226 847 aa12.21□□□□□ -0.46
CCDC84-205ENST00000528088 NLRP11P59045 1033 aaKnown RBP12.21□□□□□ -0.46
CCDC84-205ENST00000528088 GRB10Q13322 594 aa12.21□□□□□ -0.46
CCDC84-205ENST00000528088 FAM102BQ5T8I3 360 aa12.21□□□□□ -0.46
CCDC84-205ENST00000528088 RRAGBQ5VZM2 374 aa12.21□□□□□ -0.46
CCDC84-205ENST00000528088 USP49Q70CQ1 688 aa12.21□□□□□ -0.46
CCDC84-205ENST00000528088 PDILTQ8N807 584 aa12.21□□□□□ -0.46
CCDC84-205ENST00000528088 MCPH1Q8NEM0 835 aa12.21□□□□□ -0.46
CCDC84-205ENST00000528088 FAM174AQ8TBP5 190 aa12.21□□□□□ -0.46
CCDC84-205ENST00000528088 PSPC1Q8WXF1 523 aaKnown RBP12.21□□□□□ -0.46
CCDC84-205ENST00000528088 WNT2BQ93097 391 aa12.21□□□□□ -0.46
CCDC84-205ENST00000528088 PNMA5Q96PV4 448 aa12.21□□□□□ -0.46
CCDC84-205ENST00000528088 OCSTAMPQ9BR26 566 aa12.21□□□□□ -0.46
CCDC84-205ENST00000528088 PANK2Q9BZ23 570 aa12.21□□□□□ -0.46
CCDC84-205ENST00000528088 DHX33Q9H6R0 707 aaKnown RBP12.21□□□□□ -0.46
CCDC84-205ENST00000528088 PLA2G4BP0C869 781 aa12.2□□□□□ -0.46
CCDC84-205ENST00000528088 DEFB103AP81534 67 aa12.2□□□□□ -0.46
CCDC84-205ENST00000528088 DRP2Q13474 957 aa12.2□□□□□ -0.46
CCDC84-205ENST00000528088 MSS51Q4VC12 460 aa12.2□□□□□ -0.46
CCDC84-205ENST00000528088 CCDC73Q6ZRK6 1079 aa12.2□□□□□ -0.46
CCDC84-205ENST00000528088 SPRED2Q7Z698 418 aa12.2□□□□□ -0.46
CCDC84-205ENST00000528088 RPAINQ86UA6 219 aa12.2□□□□□ -0.46
CCDC84-205ENST00000528088 GBF1Q92538 1859 aa12.2□□□□□ -0.46
CCDC84-205ENST00000528088 OSMRQ99650 979 aa12.2□□□□□ -0.46
CCDC84-205ENST00000528088 CELF4Q9BZC1 486 aaKnown RBP12.2□□□□□ -0.46
CCDC84-205ENST00000528088 CCSER1Q9C0I3 900 aa12.2□□□□□ -0.46
CCDC84-205ENST00000528088 POLR3FQ9H1D9 316 aaPredicted RBP12.2□□□□□ -0.46
CCDC84-205ENST00000528088 SLC28A3Q9HAS3 691 aa12.2□□□□□ -0.46
CCDC84-205ENST00000528088 RCOR1Q9UKL0 485 aa12.2□□□□□ -0.46
CCDC84-205ENST00000528088 PCDHA7Q9UN72 937 aa12.2□□□□□ -0.46
CCDC84-205ENST00000528088 PCDHA11Q9Y5I1 949 aa12.2□□□□□ -0.46
CCDC84-205ENST00000528088 COL4A3BPQ9Y5P4 624 aa12.2□□□□□ -0.46
CCDC84-205ENST00000528088 MORC2Q9Y6X9 1032 aaPredicted RBP12.2□□□□□ -0.46
CCDC84-205ENST00000528088 EPOPA6NHQ4 379 aa12.19□□□□□ -0.46
CCDC84-205ENST00000528088 RFXAPO00287 272 aa12.19□□□□□ -0.46
CCDC84-205ENST00000528088 DXOO77932 396 aaKnown RBP12.19□□□□□ -0.46
CCDC84-205ENST00000528088 CHRNA1P02708 482 aa12.19□□□□□ -0.46
CCDC84-205ENST00000528088 CA3P07451 260 aa12.19□□□□□ -0.46
CCDC84-205ENST00000528088 CCNYL3P0C7X3 344 aa12.19□□□□□ -0.46
CCDC84-205ENST00000528088 SRGAP2CP0DJJ0 459 aa12.19□□□□□ -0.46
CCDC84-205ENST00000528088 WDR5P61964 334 aaKnown RBP12.19□□□□□ -0.46
CCDC84-205ENST00000528088 RAD51AP2Q09MP3 1159 aa12.19□□□□□ -0.46
CCDC84-205ENST00000528088 NFX1Q12986 1120 aaKnown RBP12.19□□□□□ -0.46
CCDC84-205ENST00000528088 PAK2Q13177 524 aa12.19□□□□□ -0.46
CCDC84-205ENST00000528088 TMEM119Q4V9L6 283 aa12.19□□□□□ -0.46
CCDC84-205ENST00000528088 HYIQ5T013 277 aa12.19□□□□□ -0.46
CCDC84-205ENST00000528088 KCNK18Q7Z418 384 aa12.19□□□□□ -0.46
CCDC84-205ENST00000528088 KSR1Q8IVT5 923 aa12.19□□□□□ -0.46
CCDC84-205ENST00000528088 HERC6Q8IVU3 1022 aa12.19□□□□□ -0.46
CCDC84-205ENST00000528088 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.19□□□□□ -0.46
CCDC84-205ENST00000528088 SEPT8Q92599 483 aa12.19□□□□□ -0.46
CCDC84-205ENST00000528088 LARP4BQ92615 738 aaKnown RBP12.19□□□□□ -0.46
CCDC84-205ENST00000528088 CERS4Q9HA82 394 aa12.19□□□□□ -0.46
CCDC84-205ENST00000528088 PRDM6Q9NQX0 595 aa12.19□□□□□ -0.46
CCDC84-205ENST00000528088 EVA1BQ9NVM1 165 aa12.19□□□□□ -0.46
CCDC84-205ENST00000528088 ZMIZ1Q9ULJ6 1067 aa12.19□□□□□ -0.46
CCDC84-205ENST00000528088 IGKV6-21A0A0C4DH24 114 aa12.18□□□□□ -0.46
CCDC84-205ENST00000528088 LRRIQ4A6NIV6 560 aa12.18□□□□□ -0.46
CCDC84-205ENST00000528088 RPS6KA5O75582 802 aa12.18□□□□□ -0.46
CCDC84-205ENST00000528088 SKIP12755 728 aa12.18□□□□□ -0.46
CCDC84-205ENST00000528088 CYP11B2P19099 503 aa12.18□□□□□ -0.46
CCDC84-205ENST00000528088 IBSPP21815 317 aaPredicted RBP12.18□□□□□ -0.46
CCDC84-205ENST00000528088 GPC3P51654 580 aa12.18□□□□□ -0.46
CCDC84-205ENST00000528088 CRYBB1P53674 252 aaPredicted RBP12.18□□□□□ -0.46
CCDC84-205ENST00000528088 CDC42EP1Q00587 391 aa12.18□□□□□ -0.46
CCDC84-205ENST00000528088 MGAT3Q09327 533 aa12.18□□□□□ -0.46
CCDC84-205ENST00000528088 TFDP1Q14186 410 aa12.18□□□□□ -0.46
CCDC84-205ENST00000528088 MXD4Q14582 209 aaPredicted RBP12.18□□□□□ -0.46
CCDC84-205ENST00000528088 FAM26DQ5JW98 314 aa12.18□□□□□ -0.46
CCDC84-205ENST00000528088 FBXO47Q5MNV8 452 aa12.18□□□□□ -0.46
CCDC84-205ENST00000528088 CNKSR3Q6P9H4 555 aa12.18□□□□□ -0.46
CCDC84-205ENST00000528088 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.18□□□□□ -0.46
CCDC84-205ENST00000528088 TSHZ1Q6ZSZ6 1077 aa12.18□□□□□ -0.46
CCDC84-205ENST00000528088 GPBP1Q86WP2 473 aa12.18□□□□□ -0.46
CCDC84-205ENST00000528088 LINC01465Q8N7H1 131 aa12.18□□□□□ -0.46
CCDC84-205ENST00000528088 DBF4BQ8NFT6 615 aa12.18□□□□□ -0.46
CCDC84-205ENST00000528088 PHOSPHO2Q8TCD6 241 aa12.18□□□□□ -0.46
CCDC84-205ENST00000528088 PRPF31Q8WWY3 499 aaKnown RBP12.18□□□□□ -0.46
CCDC84-205ENST00000528088 PPM1EQ8WY54 764 aa12.18□□□□□ -0.46
CCDC84-205ENST00000528088 RAD54LQ92698 747 aa12.18□□□□□ -0.46
CCDC84-205ENST00000528088 DHX58Q96C10 678 aa12.18□□□□□ -0.46
CCDC84-205ENST00000528088 IFT74Q96LB3 600 aa12.18□□□□□ -0.46
CCDC84-205ENST00000528088 CEP89Q96ST8 783 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms