RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 RGS19P49795 217 aa3.38□□□□□ -1.87
HMGB1P35-201ENST00000503360 MECP2P51608 486 aaKnown RBP3.38□□□□□ -1.87
HMGB1P35-201ENST00000503360 EVA1CP58658 441 aa3.38□□□□□ -1.87
HMGB1P35-201ENST00000503360 ADAM8P78325 824 aa3.38□□□□□ -1.87
HMGB1P35-201ENST00000503360 MAPK7Q13164 816 aa3.38□□□□□ -1.87
HMGB1P35-201ENST00000503360 DHCR24Q15392 516 aa3.38□□□□□ -1.87
HMGB1P35-201ENST00000503360 ARHGAP44Q17R89 818 aa3.38□□□□□ -1.87
HMGB1P35-201ENST00000503360 MDGA1Q8NFP4 955 aa3.38□□□□□ -1.87
HMGB1P35-201ENST00000503360 CALML6Q8TD86 181 aa3.38□□□□□ -1.87
HMGB1P35-201ENST00000503360 ANKS1AQ92625 1134 aa3.38□□□□□ -1.87
HMGB1P35-201ENST00000503360 USP7Q93009 1102 aa3.38□□□□□ -1.87
HMGB1P35-201ENST00000503360 MLST8Q9BVC4 326 aa3.38□□□□□ -1.87
HMGB1P35-201ENST00000503360 KRTAP1-5Q9BYS1 174 aa3.38□□□□□ -1.87
HMGB1P35-201ENST00000503360 MCM8Q9UJA3 840 aa3.38□□□□□ -1.87
HMGB1P35-201ENST00000503360 FAM184BQ9ULE4 1060 aa3.38□□□□□ -1.87
HMGB1P35-201ENST00000503360 ASB1Q9Y576 335 aa3.38□□□□□ -1.87
HMGB1P35-201ENST00000503360 TRIM24O15164 1050 aa3.37□□□□□ -1.87
HMGB1P35-201ENST00000503360 EYA4O95677 639 aa3.37□□□□□ -1.87
HMGB1P35-201ENST00000503360 HMGB1P09429 215 aaKnown RBP3.37□□□□□ -1.87
HMGB1P35-201ENST00000503360 ATP2A2P16615 1042 aaKnown RBP3.37□□□□□ -1.87
HMGB1P35-201ENST00000503360 NR4A1P22736 598 aa3.37□□□□□ -1.87
HMGB1P35-201ENST00000503360 APEX1P27695 318 aaKnown RBP3.37□□□□□ -1.87
HMGB1P35-201ENST00000503360 ID4P47928 161 aa3.37□□□□□ -1.87
HMGB1P35-201ENST00000503360 CLK3P49761 638 aaKnown RBP3.37□□□□□ -1.87
HMGB1P35-201ENST00000503360 CDKN1CP49918 316 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P35-201ENST00000503360 IL2P60568 153 aa3.37□□□□□ -1.87
HMGB1P35-201ENST00000503360 IRF9Q00978 393 aa3.37□□□□□ -1.87
HMGB1P35-201ENST00000503360 DSG1Q02413 1049 aa3.37□□□□□ -1.87
HMGB1P35-201ENST00000503360 C1QL3Q5VWW1 255 aa3.37□□□□□ -1.87
HMGB1P35-201ENST00000503360 KCNV1Q6PIU1 500 aa3.37□□□□□ -1.87
HMGB1P35-201ENST00000503360 GAREM2Q75VX8 874 aa3.37□□□□□ -1.87
HMGB1P35-201ENST00000503360 OTOP1Q7RTM1 612 aa3.37□□□□□ -1.87
HMGB1P35-201ENST00000503360 RD3Q7Z3Z2 195 aa3.37□□□□□ -1.87
HMGB1P35-201ENST00000503360 PRPF38AQ8NAV1 312 aaKnown RBP3.37□□□□□ -1.87
HMGB1P35-201ENST00000503360 SMC1BQ8NDV3 1235 aa3.37□□□□□ -1.87
HMGB1P35-201ENST00000503360 CHTF18Q8WVB6 975 aa3.37□□□□□ -1.87
HMGB1P35-201ENST00000503360 MYEOVQ96EZ4 313 aa3.37□□□□□ -1.87
HMGB1P35-201ENST00000503360 COQ10AQ96MF6 247 aa3.37□□□□□ -1.87
HMGB1P35-201ENST00000503360 GPR101Q96P66 508 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P35-201ENST00000503360 TTC1Q99614 292 aa3.37□□□□□ -1.87
HMGB1P35-201ENST00000503360 TCF25Q9BQ70 676 aa3.37□□□□□ -1.87
HMGB1P35-201ENST00000503360 BOCQ9BWV1 1114 aa3.37□□□□□ -1.87
HMGB1P35-201ENST00000503360 IFT22Q9H7X7 185 aa3.37□□□□□ -1.87
HMGB1P35-201ENST00000503360 THG1LQ9NWX6 298 aaKnown RBP3.37□□□□□ -1.87
HMGB1P35-201ENST00000503360 H7C1D1 291 aa3.36□□□□□ -1.87
HMGB1P35-201ENST00000503360 SCDO00767 359 aa3.36□□□□□ -1.87
HMGB1P35-201ENST00000503360 NEMP1O14524 444 aa3.36□□□□□ -1.87
HMGB1P35-201ENST00000503360 KIAA0355O15063 1070 aa3.36□□□□□ -1.87
HMGB1P35-201ENST00000503360 ZEB2O60315 1214 aa3.36□□□□□ -1.87
HMGB1P35-201ENST00000503360 BRINP1O60477 761 aa3.36□□□□□ -1.87
HMGB1P35-201ENST00000503360 HIP1RO75146 1068 aa3.36□□□□□ -1.87
HMGB1P35-201ENST00000503360 RECQL4O94761 1208 aa3.36□□□□□ -1.87
HMGB1P35-201ENST00000503360 FKBP9O95302 570 aa3.36□□□□□ -1.87
HMGB1P35-201ENST00000503360 ZBTB48P10074 688 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P35-201ENST00000503360 HSP90B1P14625 803 aaKnown RBP3.36□□□□□ -1.87
HMGB1P35-201ENST00000503360 BPIP17213 487 aa3.36□□□□□ -1.87
HMGB1P35-201ENST00000503360 MC4RP32245 332 aa3.36□□□□□ -1.87
HMGB1P35-201ENST00000503360 ADCYAP1R1P41586 468 aa3.36□□□□□ -1.87
HMGB1P35-201ENST00000503360 STAT5BP51692 787 aa3.36□□□□□ -1.87
HMGB1P35-201ENST00000503360 KPNA1P52294 538 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P35-201ENST00000503360 ELLP55199 621 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P35-201ENST00000503360 STAT4Q14765 748 aa3.36□□□□□ -1.87
HMGB1P35-201ENST00000503360 FKBP15Q5T1M5 1219 aa3.36□□□□□ -1.87
HMGB1P35-201ENST00000503360 FSTL4Q6MZW2 842 aa3.36□□□□□ -1.87
HMGB1P35-201ENST00000503360 LHFPL2Q6ZUX7 228 aa3.36□□□□□ -1.87
HMGB1P35-201ENST00000503360 FKBP9P1Q75LS8 142 aa3.36□□□□□ -1.87
HMGB1P35-201ENST00000503360 HDGFL2Q7Z4V5 671 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P35-201ENST00000503360 NOSTRINQ8IVI9 506 aa3.36□□□□□ -1.87
HMGB1P35-201ENST00000503360 WDR66Q8TBY9 1149 aa3.36□□□□□ -1.87
HMGB1P35-201ENST00000503360 GPHA2Q96T91 129 aa3.36□□□□□ -1.87
HMGB1P35-201ENST00000503360 CYP4F11Q9HBI6 524 aa3.36□□□□□ -1.87
HMGB1P35-201ENST00000503360 IL23AQ9NPF7 189 aa3.36□□□□□ -1.87
HMGB1P35-201ENST00000503360 OXSMQ9NWU1 459 aa3.36□□□□□ -1.87
HMGB1P35-201ENST00000503360 H2AFY2Q9P0M6 372 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P35-201ENST00000503360 INSL6Q9Y581 213 aa3.36□□□□□ -1.87
HMGB1P35-201ENST00000503360 PRAMEF25A6NGN4 478 aa3.35□□□□□ -1.87
HMGB1P35-201ENST00000503360 GPR39O43194 453 aa3.35□□□□□ -1.87
HMGB1P35-201ENST00000503360 FAM20BO75063 409 aa3.35□□□□□ -1.87
HMGB1P35-201ENST00000503360 SLC9A1P19634 815 aa3.35□□□□□ -1.87
HMGB1P35-201ENST00000503360 SDHAP31040 664 aa3.35□□□□□ -1.87
HMGB1P35-201ENST00000503360 AVPR1BP47901 424 aa3.35□□□□□ -1.87
HMGB1P35-201ENST00000503360 KIF11P52732 1056 aa3.35□□□□□ -1.87
HMGB1P35-201ENST00000503360 USP14P54578 494 aa3.35□□□□□ -1.87
HMGB1P35-201ENST00000503360 KRTAP10-7P60409 375 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P35-201ENST00000503360 BLOC1S1P78537 153 aa3.35□□□□□ -1.87
HMGB1P35-201ENST00000503360 TMPRSS15P98073 1019 aa3.35□□□□□ -1.87
HMGB1P35-201ENST00000503360 ATP2C1P98194 919 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P35-201ENST00000503360 OCRLQ01968 901 aa3.35□□□□□ -1.87
HMGB1P35-201ENST00000503360 ADAM15Q13444 863 aa3.35□□□□□ -1.87
HMGB1P35-201ENST00000503360 FAM50AQ14320 339 aaKnown RBP3.35□□□□□ -1.87
HMGB1P35-201ENST00000503360 SEC23AQ15436 765 aa3.35□□□□□ -1.87
HMGB1P35-201ENST00000503360 ZNF174Q15697 407 aa3.35□□□□□ -1.87
HMGB1P35-201ENST00000503360 TIGD2Q4W5G0 525 aa3.35□□□□□ -1.87
HMGB1P35-201ENST00000503360 PRR16Q569H4 304 aa3.35□□□□□ -1.87
HMGB1P35-201ENST00000503360 RNF219Q5W0B1 726 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P35-201ENST00000503360 IQSEC1Q6DN90 963 aa3.35□□□□□ -1.87
HMGB1P35-201ENST00000503360 LRSAM1Q6UWE0 723 aa3.35□□□□□ -1.87
HMGB1P35-201ENST00000503360 Q6YL49 198 aa3.35□□□□□ -1.87
HMGB1P35-201ENST00000503360 APBB1IPQ7Z5R6 666 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P35-201ENST00000503360 C11orf74Q86VG3 221 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms