RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 MRE11P49959 708 aa25.94■■□□□ 1.74
COL27A1-208ENST00000494780 EMC2Q15006 297 aa25.94■■□□□ 1.74
COL27A1-208ENST00000494780 XKR9Q5GH70 373 aa25.94■■□□□ 1.74
COL27A1-208ENST00000494780 ZBTB33Q86T24 672 aa25.94■■□□□ 1.74
COL27A1-208ENST00000494780 FERMT3Q86UX7 667 aa25.94■■□□□ 1.74
COL27A1-208ENST00000494780 ZNF280BQ86YH2 543 aa25.94■■□□□ 1.74
COL27A1-208ENST00000494780 GBP3Q9H0R5 595 aa25.94■■□□□ 1.74
COL27A1-208ENST00000494780 RSAD1Q9HA92 442 aa25.94■■□□□ 1.74
COL27A1-208ENST00000494780 BRMS1Q9HCU9 246 aa25.94■■□□□ 1.74
COL27A1-208ENST00000494780 KANSL3Q9P2N6 904 aa25.94■■□□□ 1.74
COL27A1-208ENST00000494780 CDH22Q9UJ99 828 aa25.94■■□□□ 1.74
COL27A1-208ENST00000494780 SP100P23497 879 aaPredicted RBP25.93■■□□□ 1.74
COL27A1-208ENST00000494780 KRT2P35908 639 aa25.93■■□□□ 1.74
COL27A1-208ENST00000494780 CTTNQ14247 550 aaKnown RBP25.93■■□□□ 1.74
COL27A1-208ENST00000494780 PCBP1Q15365 356 aaKnown RBP eCLIP25.93■■□□□ 1.74
COL27A1-208ENST00000494780 UBXN11Q5T124 520 aa25.93■■□□□ 1.74
COL27A1-208ENST00000494780 RNF149Q8NC42 400 aa25.93■■□□□ 1.74
COL27A1-208ENST00000494780 TSHZ2Q9NRE2 1034 aa25.93■■□□□ 1.74
COL27A1-208ENST00000494780 BMP2KQ9NSY1 1161 aaPredicted RBP25.93■■□□□ 1.74
COL27A1-208ENST00000494780 DTNBO60941 627 aa25.92■■□□□ 1.74
COL27A1-208ENST00000494780 AK2P54819 239 aa25.92■■□□□ 1.74
COL27A1-208ENST00000494780 RARS2Q5T160 578 aaKnown RBP25.92■■□□□ 1.74
COL27A1-208ENST00000494780 PPFIBP1Q86W92 1011 aa25.92■■□□□ 1.74
COL27A1-208ENST00000494780 CNNM3Q8NE01 707 aa25.92■■□□□ 1.74
COL27A1-208ENST00000494780 PRSS33Q8NF86 280 aa25.92■■□□□ 1.74
COL27A1-208ENST00000494780 SLC22A17Q8WUG5 538 aa25.92■■□□□ 1.74
COL27A1-208ENST00000494780 MTRQ99707 1265 aa25.92■■□□□ 1.74
COL27A1-208ENST00000494780 TMEM175Q9BSA9 504 aa25.92■■□□□ 1.74
COL27A1-208ENST00000494780 FAM205CA6NFA0 338 aa25.91■■□□□ 1.74
COL27A1-208ENST00000494780 B4GALT3O60512 393 aa25.91■■□□□ 1.74
COL27A1-208ENST00000494780 DDHD2O94830 711 aa25.91■■□□□ 1.74
COL27A1-208ENST00000494780 SLITRK3O94933 977 aa25.91■■□□□ 1.74
COL27A1-208ENST00000494780 FDPSP14324 419 aaKnown RBP25.91■■□□□ 1.74
COL27A1-208ENST00000494780 EPCAMP16422 314 aa25.91■■□□□ 1.74
COL27A1-208ENST00000494780 NCLP19338 710 aaKnown RBP25.91■■□□□ 1.74
COL27A1-208ENST00000494780 PTPN5P54829 565 aa25.91■■□□□ 1.74
COL27A1-208ENST00000494780 CYP4A11Q02928 519 aa25.91■■□□□ 1.74
COL27A1-208ENST00000494780 NR5A1Q13285 461 aa25.91■■□□□ 1.74
COL27A1-208ENST00000494780 PTPN14Q15678 1187 aa25.91■■□□□ 1.74
COL27A1-208ENST00000494780 ATAT1Q5SQI0 421 aa25.91■■□□□ 1.74
COL27A1-208ENST00000494780 IER5LQ5T953 404 aa25.91■■□□□ 1.74
COL27A1-208ENST00000494780 KIAA1841Q6NSI8 718 aa25.91■■□□□ 1.74
COL27A1-208ENST00000494780 TPH2Q8IWU9 490 aa25.91■■□□□ 1.74
COL27A1-208ENST00000494780 TNFRSF25Q93038 417 aa25.91■■□□□ 1.74
COL27A1-208ENST00000494780 FAM193BQ96PV7 902 aaPredicted RBP25.91■■□□□ 1.74
COL27A1-208ENST00000494780 VN1R3Q9BXE9 311 aa25.91■■□□□ 1.74
COL27A1-208ENST00000494780 UBN1Q9NPG3 1134 aa25.91■■□□□ 1.74
COL27A1-208ENST00000494780 C2CD4DB7Z1M9 353 aa25.9■■□□□ 1.74
COL27A1-208ENST00000494780 ZBTB39O15060 712 aa25.9■■□□□ 1.74
COL27A1-208ENST00000494780 ERLIN2O94905 339 aa25.9■■□□□ 1.74
COL27A1-208ENST00000494780 LYPLA2O95372 231 aa25.9■■□□□ 1.74
COL27A1-208ENST00000494780 ALDH2P05091 517 aa25.9■■□□□ 1.74
COL27A1-208ENST00000494780 AXLP30530 894 aa25.9■■□□□ 1.74
COL27A1-208ENST00000494780 MXD4Q14582 209 aaPredicted RBP25.9■■□□□ 1.74
COL27A1-208ENST00000494780 C12orf76Q8N812 135 aaPredicted RBP25.9■■□□□ 1.74
COL27A1-208ENST00000494780 EIF2AK1Q9BQI3 630 aaKnown RBP25.9■■□□□ 1.74
COL27A1-208ENST00000494780 FAN1Q9Y2M0 1017 aa25.9■■□□□ 1.74
COL27A1-208ENST00000494780 ZDBF2Q9HCK1 2354 aa25.9■■□□□ 1.74
COL27A1-208ENST00000494780 WEE2P0C1S8 567 aa25.89■■□□□ 1.74
COL27A1-208ENST00000494780 PTENP60484 403 aa25.89■■□□□ 1.74
COL27A1-208ENST00000494780 POU5F1BQ06416 359 aa25.89■■□□□ 1.74
COL27A1-208ENST00000494780 CABP7Q86V35 215 aa25.89■■□□□ 1.74
COL27A1-208ENST00000494780 UBALD2Q8IYN6 164 aa25.89■■□□□ 1.74
COL27A1-208ENST00000494780 KREMEN2Q8NCW0 462 aa25.89■■□□□ 1.74
COL27A1-208ENST00000494780 CCDC51Q96ER9 411 aa25.89■■□□□ 1.74
COL27A1-208ENST00000494780 HSD17B14Q9BPX1 270 aa25.89■■□□□ 1.74
COL27A1-208ENST00000494780 EMILIN2Q9BXX0 1053 aa25.89■■□□□ 1.74
COL27A1-208ENST00000494780 XPNPEP1Q9NQW7 623 aa25.89■■□□□ 1.74
COL27A1-208ENST00000494780 PCDHA12Q9UN75 941 aa25.89■■□□□ 1.74
COL27A1-208ENST00000494780 SORCS3Q9UPU3 1222 aa25.89■■□□□ 1.74
COL27A1-208ENST00000494780 ARID2Q68CP9 1835 aa25.88■■□□□ 1.73
COL27A1-208ENST00000494780 ITGA4P13612 1032 aa25.88■■□□□ 1.73
COL27A1-208ENST00000494780 AFF1P51825 1210 aaKnown RBP25.88■■□□□ 1.73
COL27A1-208ENST00000494780 MTMR3Q13615 1198 aa25.88■■□□□ 1.73
COL27A1-208ENST00000494780 TFDP1Q14186 410 aa25.88■■□□□ 1.73
COL27A1-208ENST00000494780 CALCRLQ16602 461 aa25.88■■□□□ 1.73
COL27A1-208ENST00000494780 IFNLR1Q8IU57 520 aaPredicted RBP25.88■■□□□ 1.73
COL27A1-208ENST00000494780 NECAB1Q8N987 351 aa25.88■■□□□ 1.73
COL27A1-208ENST00000494780 SMG8Q8ND04 991 aaKnown RBP25.88■■□□□ 1.73
COL27A1-208ENST00000494780 GTF3C6Q969F1 213 aa25.88■■□□□ 1.73
COL27A1-208ENST00000494780 KLHL5Q96PQ7 755 aa25.88■■□□□ 1.73
COL27A1-208ENST00000494780 ANKEF1Q9NU02 776 aa25.88■■□□□ 1.73
COL27A1-208ENST00000494780 KMT2EQ8IZD2 1858 aa25.87■■□□□ 1.73
COL27A1-208ENST00000494780 INPPL1O15357 1258 aa25.87■■□□□ 1.73
COL27A1-208ENST00000494780 TSPAN1O60635 241 aa25.87■■□□□ 1.73
COL27A1-208ENST00000494780 POMCP01189 267 aa25.87■■□□□ 1.73
COL27A1-208ENST00000494780 NEFLP07196 543 aa25.87■■□□□ 1.73
COL27A1-208ENST00000494780 NCBP1Q09161 790 aaKnown RBP25.87■■□□□ 1.73
COL27A1-208ENST00000494780 ME3Q16798 604 aa25.87■■□□□ 1.73
COL27A1-208ENST00000494780 NOTUMQ6P988 496 aa25.87■■□□□ 1.73
COL27A1-208ENST00000494780 ZDHHC14Q8IZN3 488 aa25.87■■□□□ 1.73
COL27A1-208ENST00000494780 TDRD5Q8NAT2 981 aaKnown RBP25.87■■□□□ 1.73
COL27A1-208ENST00000494780 DBR1Q9UK59 544 aaKnown RBP25.87■■□□□ 1.73
COL27A1-208ENST00000494780 USTQ9Y2C2 406 aa25.87■■□□□ 1.73
COL27A1-208ENST00000494780 IPPQ9Y573 584 aa25.87■■□□□ 1.73
COL27A1-208ENST00000494780 NRP1O14786 923 aa25.86■■□□□ 1.73
COL27A1-208ENST00000494780 LILRB3O75022 631 aa25.86■■□□□ 1.73
COL27A1-208ENST00000494780 DGAT1O75907 488 aa25.86■■□□□ 1.73
COL27A1-208ENST00000494780 KLRC2P26717 231 aa25.86■■□□□ 1.73
COL27A1-208ENST00000494780 AVPR2P30518 371 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms