RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 SSTR3P32745 418 aaPredicted RBP15.56■□□□□ 0.08
VTI1A-206ENST00000489142 CA8P35219 290 aa15.56■□□□□ 0.08
VTI1A-206ENST00000489142 FXR2P51116 673 aaKnown RBP eCLIP15.56■□□□□ 0.08
VTI1A-206ENST00000489142 PLCB3Q01970 1234 aa15.56■□□□□ 0.08
VTI1A-206ENST00000489142 RNASELQ05823 741 aaKnown RBP15.56■□□□□ 0.08
VTI1A-206ENST00000489142 IL17AQ16552 155 aa15.56■□□□□ 0.08
VTI1A-206ENST00000489142 PADI6Q6TGC4 694 aa15.56■□□□□ 0.08
VTI1A-206ENST00000489142 ZNF280BQ86YH2 543 aa15.56■□□□□ 0.08
VTI1A-206ENST00000489142 FAM178BQ8IXR5 827 aa15.56■□□□□ 0.08
VTI1A-206ENST00000489142 EFHBQ8N7U6 833 aa15.56■□□□□ 0.08
VTI1A-206ENST00000489142 SMG8Q8ND04 991 aaKnown RBP15.56■□□□□ 0.08
VTI1A-206ENST00000489142 BCL7CQ8WUZ0 217 aaPredicted RBP15.56■□□□□ 0.08
VTI1A-206ENST00000489142 BSNDQ8WZ55 320 aa15.56■□□□□ 0.08
VTI1A-206ENST00000489142 NACC1Q96RE7 527 aa15.56■□□□□ 0.08
VTI1A-206ENST00000489142 APOL6Q9BWW8 343 aa15.56■□□□□ 0.08
VTI1A-206ENST00000489142 RNF39Q9H2S5 420 aa15.56■□□□□ 0.08
VTI1A-206ENST00000489142 NRDE2Q9H7Z3 1164 aa15.56■□□□□ 0.08
VTI1A-206ENST00000489142 CLEC1BQ9P126 229 aa15.56■□□□□ 0.08
VTI1A-206ENST00000489142 LRWD1Q9UFC0 647 aa15.56■□□□□ 0.08
VTI1A-206ENST00000489142 CD207Q9UJ71 328 aa15.56■□□□□ 0.08
VTI1A-206ENST00000489142 DBR1Q9UK59 544 aaKnown RBP15.56■□□□□ 0.08
VTI1A-206ENST00000489142 ARHGEF35A5YM69 484 aa15.55■□□□□ 0.08
VTI1A-206ENST00000489142 H3BQV1 296 aa15.55■□□□□ 0.08
VTI1A-206ENST00000489142 MBTPS2O43462 519 aa15.55■□□□□ 0.08
VTI1A-206ENST00000489142 POMCP01189 267 aa15.55■□□□□ 0.08
VTI1A-206ENST00000489142 XRCC6P12956 609 aaKnown RBP eCLIP15.55■□□□□ 0.08
VTI1A-206ENST00000489142 ARF4P18085 180 aaPredicted RBP15.55■□□□□ 0.08
VTI1A-206ENST00000489142 LIG1P18858 919 aa15.55■□□□□ 0.08
VTI1A-206ENST00000489142 CDC25AP30304 524 aa15.55■□□□□ 0.08
VTI1A-206ENST00000489142 PPM1AP35813 382 aa15.55■□□□□ 0.08
VTI1A-206ENST00000489142 ALDH7A1P49419 539 aaKnown RBP15.55■□□□□ 0.08
VTI1A-206ENST00000489142 KRT17Q04695 432 aa15.55■□□□□ 0.08
VTI1A-206ENST00000489142 AMHR2Q16671 573 aa15.55■□□□□ 0.08
VTI1A-206ENST00000489142 LLGL2Q6P1M3 1020 aa15.55■□□□□ 0.08
VTI1A-206ENST00000489142 AUTS2Q8WXX7 1259 aa15.55■□□□□ 0.08
VTI1A-206ENST00000489142 PGBD4Q96DM1 585 aa15.55■□□□□ 0.08
VTI1A-206ENST00000489142 EPHX3Q9H6B9 360 aa15.55■□□□□ 0.08
VTI1A-206ENST00000489142 RSAD1Q9HA92 442 aa15.55■□□□□ 0.08
VTI1A-206ENST00000489142 PUF60Q9UHX1 559 aaKnown RBP15.55■□□□□ 0.08
VTI1A-206ENST00000489142 SMC3Q9UQE7 1217 aa15.55■□□□□ 0.08
VTI1A-206ENST00000489142 LZTS1Q9Y250 596 aa15.55■□□□□ 0.08
VTI1A-206ENST00000489142 USP20Q9Y2K6 914 aa15.55■□□□□ 0.08
VTI1A-206ENST00000489142 KIF3AQ9Y496 699 aa15.55■□□□□ 0.08
VTI1A-206ENST00000489142 IPPQ9Y573 584 aa15.55■□□□□ 0.08
VTI1A-206ENST00000489142 DDHD2O94830 711 aa15.54■□□□□ 0.08
VTI1A-206ENST00000489142 SLC11A1P49279 550 aa15.54■□□□□ 0.08
VTI1A-206ENST00000489142 DUSP6Q16828 381 aa15.54■□□□□ 0.08
VTI1A-206ENST00000489142 PUS10Q3MIT2 529 aaKnown RBP15.54■□□□□ 0.08
VTI1A-206ENST00000489142 HAUS3Q68CZ6 603 aa15.54■□□□□ 0.08
VTI1A-206ENST00000489142 NOTUMQ6P988 496 aa15.54■□□□□ 0.08
VTI1A-206ENST00000489142 TMC7Q7Z402 723 aa15.54■□□□□ 0.08
VTI1A-206ENST00000489142 MRPL10Q7Z7H8 261 aaKnown RBP15.54■□□□□ 0.08
VTI1A-206ENST00000489142 IFNLR1Q8IU57 520 aaPredicted RBP15.54■□□□□ 0.08
VTI1A-206ENST00000489142 MCPH1Q8NEM0 835 aa15.54■□□□□ 0.08
VTI1A-206ENST00000489142 URGCPQ8TCY9 931 aa15.54■□□□□ 0.08
VTI1A-206ENST00000489142 SNX29Q8TEQ0 813 aa15.54■□□□□ 0.08
VTI1A-206ENST00000489142 MSLNLQ96KJ4 702 aa15.54■□□□□ 0.08
VTI1A-206ENST00000489142 APOL5Q9BWW9 433 aa15.54■□□□□ 0.08
VTI1A-206ENST00000489142 BHMT2Q9H2M3 363 aa15.54■□□□□ 0.08
VTI1A-206ENST00000489142 NXF3Q9H4D5 531 aaKnown RBP15.54■□□□□ 0.08
VTI1A-206ENST00000489142 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.54■□□□□ 0.08
VTI1A-206ENST00000489142 DDX19AQ9NUU7 478 aaKnown RBP15.54■□□□□ 0.08
VTI1A-206ENST00000489142 KIAA1024Q9UPX6 916 aa15.54■□□□□ 0.08
VTI1A-206ENST00000489142 TTLL13PA6NNM8 815 aa15.53■□□□□ 0.08
VTI1A-206ENST00000489142 NPTXRO95502 500 aa15.53■□□□□ 0.08
VTI1A-206ENST00000489142 GALTP07902 379 aa15.53■□□□□ 0.08
VTI1A-206ENST00000489142 ITGA4P13612 1032 aa15.53■□□□□ 0.08
VTI1A-206ENST00000489142 NCLP19338 710 aaKnown RBP15.53■□□□□ 0.08
VTI1A-206ENST00000489142 SMAD4Q13485 552 aaKnown RBP15.53■□□□□ 0.08
VTI1A-206ENST00000489142 ZRSR1Q15695 479 aaKnown RBP15.53■□□□□ 0.08
VTI1A-206ENST00000489142 GJD3Q8N144 294 aa15.53■□□□□ 0.08
VTI1A-206ENST00000489142 IGSF22Q8N9C0 903 aa15.53■□□□□ 0.08
VTI1A-206ENST00000489142 TMEM169Q96HH4 297 aa15.53■□□□□ 0.08
VTI1A-206ENST00000489142 ZFP42Q96MM3 310 aa15.53■□□□□ 0.08
VTI1A-206ENST00000489142 GAD1Q99259 594 aa15.53■□□□□ 0.08
VTI1A-206ENST00000489142 KIFC3Q9BVG8 833 aa15.53■□□□□ 0.08
VTI1A-206ENST00000489142 CSRNP2Q9H175 543 aa15.53■□□□□ 0.08
VTI1A-206ENST00000489142 CNTNAP2Q9UHC6 1331 aa15.52■□□□□ 0.08
VTI1A-206ENST00000489142 E9PMD0 336 aa15.52■□□□□ 0.08
VTI1A-206ENST00000489142 EDN1P05305 212 aa15.52■□□□□ 0.08
VTI1A-206ENST00000489142 CYP11B2P19099 503 aa15.52■□□□□ 0.08
VTI1A-206ENST00000489142 AKAP5P24588 427 aa15.52■□□□□ 0.08
VTI1A-206ENST00000489142 MLH1P40692 756 aa15.52■□□□□ 0.08
VTI1A-206ENST00000489142 MCM2P49736 904 aa15.52■□□□□ 0.08
VTI1A-206ENST00000489142 ZP2Q05996 745 aa15.52■□□□□ 0.08
VTI1A-206ENST00000489142 POU5F1BQ06416 359 aa15.52■□□□□ 0.08
VTI1A-206ENST00000489142 SMAD2Q15796 467 aaKnown RBP15.52■□□□□ 0.08
VTI1A-206ENST00000489142 PDE12Q6L8Q7 609 aaKnown RBP15.52■□□□□ 0.08
VTI1A-206ENST00000489142 VPS52Q8N1B4 723 aa15.52■□□□□ 0.08
VTI1A-206ENST00000489142 IGSF21Q96ID5 467 aa15.52■□□□□ 0.08
VTI1A-206ENST00000489142 FAM193BQ96PV7 902 aaPredicted RBP15.52■□□□□ 0.08
VTI1A-206ENST00000489142 VN1R3Q9BXE9 311 aa15.52■□□□□ 0.08
VTI1A-206ENST00000489142 NFKBIZQ9BYH8 718 aa15.52■□□□□ 0.08
VTI1A-206ENST00000489142 TRIM6Q9C030 488 aaPredicted RBP15.52■□□□□ 0.08
VTI1A-206ENST00000489142 FAM50BQ9Y247 325 aa15.52■□□□□ 0.08
VTI1A-206ENST00000489142 FAM86C2PA6NEL3 165 aa15.51■□□□□ 0.07
VTI1A-206ENST00000489142 C2orf71A6NGG8 1288 aa15.51■□□□□ 0.07
VTI1A-206ENST00000489142 ARL5CA6NH57 179 aa15.51■□□□□ 0.07
VTI1A-206ENST00000489142 SSBP05455 408 aaKnown RBP eCLIP15.51■□□□□ 0.07
VTI1A-206ENST00000489142 AXLP30530 894 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms