RNA–Protein interactions for RNA: ENST00000470408.5

UBE3C-205, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 5,197 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-205ENST00000470408 TRIM4Q9C037 500 aa10.16□□□□□ -0.78
UBE3C-205ENST00000470408 MAD1L1Q9Y6D9 718 aa10.16□□□□□ -0.78
UBE3C-205ENST00000470408 HOXA2O43364 376 aa10.16□□□□□ -0.78
UBE3C-205ENST00000470408 SEC31AO94979 1220 aaKnown RBP10.16□□□□□ -0.78
UBE3C-205ENST00000470408 KRT7P08729 469 aa10.16□□□□□ -0.78
UBE3C-205ENST00000470408 RPA1P27694 616 aa10.16□□□□□ -0.78
UBE3C-205ENST00000470408 SDC4P31431 198 aa10.16□□□□□ -0.78
UBE3C-205ENST00000470408 CLCN6P51797 869 aa10.16□□□□□ -0.78
UBE3C-205ENST00000470408 GUCY2FP51841 1108 aa10.16□□□□□ -0.78
UBE3C-205ENST00000470408 EPHB1P54762 984 aa10.16□□□□□ -0.78
UBE3C-205ENST00000470408 IRX5P78411 483 aaPredicted RBP10.16□□□□□ -0.78
UBE3C-205ENST00000470408 EDRF1Q3B7T1 1238 aa10.16□□□□□ -0.78
UBE3C-205ENST00000470408 DARS2Q6PI48 645 aaKnown RBP10.16□□□□□ -0.78
UBE3C-205ENST00000470408 ELOA2Q8IYF1 753 aaPredicted RBP10.16□□□□□ -0.78
UBE3C-205ENST00000470408 GDAP1L1Q96MZ0 367 aa10.16□□□□□ -0.78
UBE3C-205ENST00000470408 MKNK1Q9BUB5 465 aa10.16□□□□□ -0.78
UBE3C-205ENST00000470408 KIF9Q9HAQ2 790 aa10.16□□□□□ -0.78
UBE3C-205ENST00000470408 WDR35Q9P2L0 1181 aa10.16□□□□□ -0.78
UBE3C-205ENST00000470408 HPCAL4Q9UM19 191 aa10.16□□□□□ -0.78
UBE3C-205ENST00000470408 FARP1Q9Y4F1 1045 aaPredicted RBP10.16□□□□□ -0.78
UBE3C-205ENST00000470408 PCDHA13Q9Y5I0 950 aa10.16□□□□□ -0.78
UBE3C-205ENST00000470408 EIF3DO15371 548 aaKnown RBP eCLIP10.16□□□□□ -0.78
UBE3C-205ENST00000470408 EVI5O60447 810 aa10.16□□□□□ -0.78
UBE3C-205ENST00000470408 CPP00450 1065 aa10.16□□□□□ -0.78
UBE3C-205ENST00000470408 STAG3L1P0CL83 205 aa10.16□□□□□ -0.78
UBE3C-205ENST00000470408 ATP1A2P50993 1020 aa10.16□□□□□ -0.78
UBE3C-205ENST00000470408 MRRFQ96E11 262 aaKnown RBP10.16□□□□□ -0.78
UBE3C-205ENST00000470408 KIF12Q96FN5 646 aa10.16□□□□□ -0.78
UBE3C-205ENST00000470408 NUF2Q9BZD4 464 aa10.16□□□□□ -0.78
UBE3C-205ENST00000470408 Q9H521 79 aa10.16□□□□□ -0.78
UBE3C-205ENST00000470408 AAASQ9NRG9 546 aa10.16□□□□□ -0.78
UBE3C-205ENST00000470408 MFAP3LO75121 409 aa10.16□□□□□ -0.78
UBE3C-205ENST00000470408 MYCP01106 439 aaPredicted RBP10.16□□□□□ -0.78
UBE3C-205ENST00000470408 APOEP02649 317 aa10.16□□□□□ -0.78
UBE3C-205ENST00000470408 GCLMP48507 274 aa10.16□□□□□ -0.78
UBE3C-205ENST00000470408 YWHAGP61981 247 aaKnown RBP eCLIP10.16□□□□□ -0.78
UBE3C-205ENST00000470408 GLB1LQ6UWU2 654 aa10.16□□□□□ -0.78
UBE3C-205ENST00000470408 CD302Q8IX05 232 aa10.16□□□□□ -0.78
UBE3C-205ENST00000470408 EFHBQ8N7U6 833 aa10.16□□□□□ -0.78
UBE3C-205ENST00000470408 CCDC197Q8NCU1 140 aa10.16□□□□□ -0.78
UBE3C-205ENST00000470408 IDI2Q9BXS1 227 aa10.16□□□□□ -0.78
UBE3C-205ENST00000470408 RTFDC1Q9BY42 306 aaPredicted RBP10.16□□□□□ -0.78
UBE3C-205ENST00000470408 PIDD1Q9HB75 910 aa10.16□□□□□ -0.78
UBE3C-205ENST00000470408 P4HA2O15460 535 aa10.15□□□□□ -0.78
UBE3C-205ENST00000470408 ZBED1O96006 694 aa10.15□□□□□ -0.78
UBE3C-205ENST00000470408 ZFXP17010 805 aaPredicted RBP10.15□□□□□ -0.78
UBE3C-205ENST00000470408 RAD51Q06609 339 aa10.15□□□□□ -0.78
UBE3C-205ENST00000470408 THOC5Q13769 683 aaKnown RBP10.15□□□□□ -0.78
UBE3C-205ENST00000470408 CLEC17AQ6ZS10 378 aa10.15□□□□□ -0.78
UBE3C-205ENST00000470408 GPIHBP1Q8IV16 184 aa10.15□□□□□ -0.78
UBE3C-205ENST00000470408 SCN4BQ8IWT1 228 aa10.15□□□□□ -0.78
UBE3C-205ENST00000470408 TACO1Q9BSH4 297 aaKnown RBP10.15□□□□□ -0.78
UBE3C-205ENST00000470408 KIAA1683Q9H0B3 1180 aa10.15□□□□□ -0.78
UBE3C-205ENST00000470408 PPP1R9AQ9ULJ8 1098 aa10.15□□□□□ -0.78
UBE3C-205ENST00000470408 PIN4Q9Y237 131 aaKnown RBP10.15□□□□□ -0.78
UBE3C-205ENST00000470408 CNTNAP5Q8WYK1 1306 aa10.15□□□□□ -0.78
UBE3C-205ENST00000470408 CARNS1A5YM72 827 aa10.15□□□□□ -0.78
UBE3C-205ENST00000470408 SUPT20HL2P0C7V6 817 aa10.15□□□□□ -0.78
UBE3C-205ENST00000470408 PRCPP42785 496 aa10.15□□□□□ -0.78
UBE3C-205ENST00000470408 PDE1BQ01064 536 aa10.15□□□□□ -0.78
UBE3C-205ENST00000470408 DNAAF3Q8N9W5 541 aa10.15□□□□□ -0.78
UBE3C-205ENST00000470408 EEF2KMTQ96G04 330 aa10.15□□□□□ -0.78
UBE3C-205ENST00000470408 TRIM56Q9BRZ2 755 aaKnown RBP10.15□□□□□ -0.78
UBE3C-205ENST00000470408 RPS6KA5O75582 802 aa10.15□□□□□ -0.78
UBE3C-205ENST00000470408 HNRNPH2P55795 449 aaKnown RBP10.15□□□□□ -0.78
UBE3C-205ENST00000470408 EMC2Q15006 297 aa10.15□□□□□ -0.78
UBE3C-205ENST00000470408 CCDC13Q8IYE1 715 aa10.15□□□□□ -0.78
UBE3C-205ENST00000470408 ANKRD13CQ8N6S4 541 aa10.15□□□□□ -0.78
UBE3C-205ENST00000470408 DNERQ8NFT8 737 aa10.15□□□□□ -0.78
UBE3C-205ENST00000470408 MAGEB5Q9BZ81 275 aa10.15□□□□□ -0.78
UBE3C-205ENST00000470408 TRIM9Q9C026 710 aa10.15□□□□□ -0.78
UBE3C-205ENST00000470408 NGRNQ9NPE2 291 aaKnown RBP10.15□□□□□ -0.78
UBE3C-205ENST00000470408 CYP26B1Q9NR63 512 aa10.15□□□□□ -0.78
UBE3C-205ENST00000470408 CNOT8Q9UFF9 292 aaKnown RBP10.15□□□□□ -0.78
UBE3C-205ENST00000470408 NRBP1Q9UHY1 535 aa10.15□□□□□ -0.78
UBE3C-205ENST00000470408 FBXO2Q9UK22 296 aaPredicted RBP10.15□□□□□ -0.78
UBE3C-205ENST00000470408 TACC3Q9Y6A5 838 aa10.15□□□□□ -0.78
UBE3C-205ENST00000470408 KIF20BQ96Q89 1820 aa10.15□□□□□ -0.79
UBE3C-205ENST00000470408 PODXLO00592 558 aa10.15□□□□□ -0.79
UBE3C-205ENST00000470408 CYP2C9P11712 490 aa10.15□□□□□ -0.79
UBE3C-205ENST00000470408 PNPLA4P41247 253 aa10.15□□□□□ -0.79
UBE3C-205ENST00000470408 SNX17Q15036 470 aa10.15□□□□□ -0.79
UBE3C-205ENST00000470408 ICE2Q659A1 982 aa10.15□□□□□ -0.79
UBE3C-205ENST00000470408 TMEM270Q6UE05 265 aa10.15□□□□□ -0.79
UBE3C-205ENST00000470408 MMS22LQ6ZRQ5 1243 aa10.15□□□□□ -0.79
UBE3C-205ENST00000470408 SRRM1Q8IYB3 904 aaKnown RBP10.15□□□□□ -0.79
UBE3C-205ENST00000470408 SH3TC2Q8TF17 1288 aa10.15□□□□□ -0.79
UBE3C-205ENST00000470408 TTC25Q96NG3 672 aa10.15□□□□□ -0.79
UBE3C-205ENST00000470408 INTS2Q9H0H0 1204 aaKnown RBP10.15□□□□□ -0.79
UBE3C-205ENST00000470408 DDX56Q9NY93 547 aaKnown RBP10.15□□□□□ -0.79
UBE3C-205ENST00000470408 IP6K2Q9UHH9 426 aa10.15□□□□□ -0.79
UBE3C-205ENST00000470408 ARHGEF28Q8N1W1 1705 aaKnown RBP10.15□□□□□ -0.79
UBE3C-205ENST00000470408 SUN1O94901 812 aa10.14□□□□□ -0.79
UBE3C-205ENST00000470408 ZRANB2O95218 330 aaKnown RBP eCLIP10.14□□□□□ -0.79
UBE3C-205ENST00000470408 PAMP19021 973 aa10.14□□□□□ -0.79
UBE3C-205ENST00000470408 DCAF4L1Q3SXM0 396 aa10.14□□□□□ -0.79
UBE3C-205ENST00000470408 GNASQ5JWF2 1037 aa10.14□□□□□ -0.79
UBE3C-205ENST00000470408 DCP1BQ8IZD4 617 aaKnown RBP10.14□□□□□ -0.79
UBE3C-205ENST00000470408 IGSF9BQ9UPX0 1349 aa10.14□□□□□ -0.79
UBE3C-205ENST00000470408 A8MXQ7 604 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms