RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 AMHR2Q16671 573 aa16.07■□□□□ 0.16
SHANK2-210ENST00000449116 KNOP1Q1ED39 458 aaKnown RBP16.07■□□□□ 0.16
SHANK2-210ENST00000449116 ANO6Q4KMQ2 910 aa16.07■□□□□ 0.16
SHANK2-210ENST00000449116 FBXO47Q5MNV8 452 aa16.07■□□□□ 0.16
SHANK2-210ENST00000449116 KLHL10Q6JEL2 608 aa16.07■□□□□ 0.16
SHANK2-210ENST00000449116 SYCP3Q8IZU3 236 aa16.07■□□□□ 0.16
SHANK2-210ENST00000449116 MRPL4Q9BYD3 311 aaKnown RBP16.07■□□□□ 0.16
SHANK2-210ENST00000449116 DNAJC25Q9H1X3 360 aa16.07■□□□□ 0.16
SHANK2-210ENST00000449116 NOC2LQ9Y3T9 749 aaKnown RBP16.07■□□□□ 0.16
SHANK2-210ENST00000449116 SQORQ9Y6N5 450 aa16.07■□□□□ 0.16
SHANK2-210ENST00000449116 SIP14410 1827 aa16.06■□□□□ 0.16
SHANK2-210ENST00000449116 ZMYM2Q9UBW7 1377 aa16.06■□□□□ 0.16
SHANK2-210ENST00000449116 HNRNPDLO14979 420 aaKnown RBP16.06■□□□□ 0.16
SHANK2-210ENST00000449116 RPS6KA5O75582 802 aa16.06■□□□□ 0.16
SHANK2-210ENST00000449116 ERLIN2O94905 339 aa16.06■□□□□ 0.16
SHANK2-210ENST00000449116 SLC34A2O95436 690 aa16.06■□□□□ 0.16
SHANK2-210ENST00000449116 PIGRP01833 764 aa16.06■□□□□ 0.16
SHANK2-210ENST00000449116 ERCC5P28715 1186 aaPredicted RBP16.06■□□□□ 0.16
SHANK2-210ENST00000449116 PAK1Q13153 545 aa16.06■□□□□ 0.16
SHANK2-210ENST00000449116 PRPF4BQ13523 1007 aaKnown RBP16.06■□□□□ 0.16
SHANK2-210ENST00000449116 C11orf57Q6ZUT1 292 aaPredicted RBP16.06■□□□□ 0.16
SHANK2-210ENST00000449116 CATSPER4Q7RTX7 472 aa16.06■□□□□ 0.16
SHANK2-210ENST00000449116 FAM228AQ86W67 206 aa16.06■□□□□ 0.16
SHANK2-210ENST00000449116 USP38Q8NB14 1042 aa16.06■□□□□ 0.16
SHANK2-210ENST00000449116 NELFBQ8WX92 580 aa16.06■□□□□ 0.16
SHANK2-210ENST00000449116 BICD1Q96G01 975 aa16.06■□□□□ 0.16
SHANK2-210ENST00000449116 HTATIP2Q9BUP3 242 aa16.06■□□□□ 0.16
SHANK2-210ENST00000449116 PPP1R12CQ9BZL4 782 aa16.06■□□□□ 0.16
SHANK2-210ENST00000449116 NAT10Q9H0A0 1025 aaKnown RBP16.06■□□□□ 0.16
SHANK2-210ENST00000449116 GBP3Q9H0R5 595 aa16.06■□□□□ 0.16
SHANK2-210ENST00000449116 KCTD10Q9H3F6 313 aa16.06■□□□□ 0.16
SHANK2-210ENST00000449116 TYW1Q9NV66 732 aaKnown RBP16.06■□□□□ 0.16
SHANK2-210ENST00000449116 CTNND2Q9UQB3 1225 aa16.06■□□□□ 0.16
SHANK2-210ENST00000449116 DNAH12Q6ZR08 3092 aa16.05■□□□□ 0.16
SHANK2-210ENST00000449116 UMODL1Q5DID0 1318 aa16.05■□□□□ 0.16
SHANK2-210ENST00000449116 CNTNAP2Q9UHC6 1331 aa16.05■□□□□ 0.16
SHANK2-210ENST00000449116 PDXKO00764 312 aa16.05■□□□□ 0.16
SHANK2-210ENST00000449116 KIAA0355O15063 1070 aa16.05■□□□□ 0.16
SHANK2-210ENST00000449116 TSPAN1O60635 241 aa16.05■□□□□ 0.16
SHANK2-210ENST00000449116 PARNO95453 639 aaKnown RBP16.05■□□□□ 0.16
SHANK2-210ENST00000449116 CAVIN2O95810 425 aa16.05■□□□□ 0.16
SHANK2-210ENST00000449116 EDN1P05305 212 aa16.05■□□□□ 0.16
SHANK2-210ENST00000449116 GHRP10912 638 aa16.05■□□□□ 0.16
SHANK2-210ENST00000449116 FGFR4P22455 802 aa16.05■□□□□ 0.16
SHANK2-210ENST00000449116 CCNE1P24864 410 aa16.05■□□□□ 0.16
SHANK2-210ENST00000449116 LIG4P49917 911 aa16.05■□□□□ 0.16
SHANK2-210ENST00000449116 SNRPFP62306 86 aaKnown RBP16.05■□□□□ 0.16
SHANK2-210ENST00000449116 NCBP1Q09161 790 aaKnown RBP16.05■□□□□ 0.16
SHANK2-210ENST00000449116 LPIN1Q14693 890 aa16.05■□□□□ 0.16
SHANK2-210ENST00000449116 MBTPS1Q14703 1052 aa16.05■□□□□ 0.16
SHANK2-210ENST00000449116 CENPPQ6IPU0 288 aa16.05■□□□□ 0.16
SHANK2-210ENST00000449116 ZPBP2Q6X784 338 aa16.05■□□□□ 0.16
SHANK2-210ENST00000449116 TSHZ1Q6ZSZ6 1077 aa16.05■□□□□ 0.16
SHANK2-210ENST00000449116 HS2ST1Q7LGA3 356 aa16.05■□□□□ 0.16
SHANK2-210ENST00000449116 GOLGA5Q8TBA6 731 aa16.05■□□□□ 0.16
SHANK2-210ENST00000449116 P2RX5Q93086 422 aa16.05■□□□□ 0.16
SHANK2-210ENST00000449116 TARS2Q9BW92 718 aaKnown RBP16.05■□□□□ 0.16
SHANK2-210ENST00000449116 SEMA6BQ9H3T3 888 aa16.05■□□□□ 0.16
SHANK2-210ENST00000449116 TSPY26PQ9H489 355 aa16.05■□□□□ 0.16
SHANK2-210ENST00000449116 PRDM5Q9NQX1 630 aaPredicted RBP16.05■□□□□ 0.16
SHANK2-210ENST00000449116 RWDD2AQ9UIY3 292 aa16.05■□□□□ 0.16
SHANK2-210ENST00000449116 BICDL2A1A5D9 508 aa16.04■□□□□ 0.16
SHANK2-210ENST00000449116 TRIM43BA6NCK2 446 aa16.04■□□□□ 0.16
SHANK2-210ENST00000449116 GPR182O15218 404 aa16.04■□□□□ 0.16
SHANK2-210ENST00000449116 B4GALT5O43286 388 aa16.04■□□□□ 0.16
SHANK2-210ENST00000449116 TGFB1I1O43294 461 aa16.04■□□□□ 0.16
SHANK2-210ENST00000449116 CALUO43852 315 aaPredicted RBP16.04■□□□□ 0.16
SHANK2-210ENST00000449116 CYP2C18P33260 490 aa16.04■□□□□ 0.16
SHANK2-210ENST00000449116 LRRC63Q05C16 580 aa16.04■□□□□ 0.16
SHANK2-210ENST00000449116 PAK2Q13177 524 aa16.04■□□□□ 0.16
SHANK2-210ENST00000449116 TMEM132AQ24JP5 1023 aa16.04■□□□□ 0.16
SHANK2-210ENST00000449116 ZCWPW2Q504Y3 356 aa16.04■□□□□ 0.16
SHANK2-210ENST00000449116 TRIM43Q96BQ3 446 aaPredicted RBP16.04■□□□□ 0.16
SHANK2-210ENST00000449116 ACO2Q99798 780 aaKnown RBP16.04■□□□□ 0.16
SHANK2-210ENST00000449116 TSG101Q99816 390 aa16.04■□□□□ 0.16
SHANK2-210ENST00000449116 WNT8AQ9H1J5 351 aa16.04■□□□□ 0.16
SHANK2-210ENST00000449116 AGO3Q9H9G7 860 aaKnown RBP16.04■□□□□ 0.16
SHANK2-210ENST00000449116 AGPAT5Q9NUQ2 364 aa16.04■□□□□ 0.16
SHANK2-210ENST00000449116 CGNQ9P2M7 1197 aaKnown RBP16.04■□□□□ 0.16
SHANK2-210ENST00000449116 ST3GAL5Q9UNP4 418 aa16.04■□□□□ 0.16
SHANK2-210ENST00000449116 TRAF3IP3Q9Y228 551 aa16.04■□□□□ 0.16
SHANK2-210ENST00000449116 USP20Q9Y2K6 914 aa16.04■□□□□ 0.16
SHANK2-210ENST00000449116 TRIM49BA6NDI0 452 aa16.03■□□□□ 0.16
SHANK2-210ENST00000449116 TTLL13PA6NNM8 815 aa16.03■□□□□ 0.16
SHANK2-210ENST00000449116 TIMP1P01033 207 aa16.03■□□□□ 0.16
SHANK2-210ENST00000449116 ARF4P18085 180 aaPredicted RBP16.03■□□□□ 0.16
SHANK2-210ENST00000449116 AXLP30530 894 aa16.03■□□□□ 0.16
SHANK2-210ENST00000449116 CD52P31358 61 aa16.03■□□□□ 0.16
SHANK2-210ENST00000449116 PMS1P54277 932 aaKnown RBP16.03■□□□□ 0.16
SHANK2-210ENST00000449116 CCL23P55773 120 aa16.03■□□□□ 0.16
SHANK2-210ENST00000449116 STX17P56962 302 aa16.03■□□□□ 0.16
SHANK2-210ENST00000449116 NFX1Q12986 1120 aaKnown RBP16.03■□□□□ 0.16
SHANK2-210ENST00000449116 ATF7IP2Q5U623 682 aa16.03■□□□□ 0.16
SHANK2-210ENST00000449116 SLC39A4Q6P5W5 647 aa16.03■□□□□ 0.16
SHANK2-210ENST00000449116 FOXR2Q6PJQ5 311 aa16.03■□□□□ 0.16
SHANK2-210ENST00000449116 BPIFA3Q9BQP9 254 aa16.03■□□□□ 0.16
SHANK2-210ENST00000449116 OSBPL7Q9BZF2 842 aa16.03■□□□□ 0.16
SHANK2-210ENST00000449116 IKZF4Q9H2S9 585 aa16.03■□□□□ 0.16
SHANK2-210ENST00000449116 ERVK-5Q9HDB9 667 aa16.03■□□□□ 0.16
SHANK2-210ENST00000449116 AGPAT3Q9NRZ7 376 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms