RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 MRPL10Q7Z7H8 261 aaKnown RBP16.97■□□□□ 0.31
NUP50-204ENST00000417702 CPB2Q96IY4 423 aa16.97■□□□□ 0.31
NUP50-204ENST00000417702 NECAB3Q96P71 396 aaPredicted RBP16.97■□□□□ 0.31
NUP50-204ENST00000417702 C2orf40Q9H1Z8 148 aa16.97■□□□□ 0.31
NUP50-204ENST00000417702 RSAD1Q9HA92 442 aa16.97■□□□□ 0.31
NUP50-204ENST00000417702 UBN1Q9NPG3 1134 aa16.97■□□□□ 0.31
NUP50-204ENST00000417702 KANSL3Q9P2N6 904 aa16.97■□□□□ 0.31
NUP50-204ENST00000417702 DNM3Q9UQ16 869 aa16.97■□□□□ 0.31
NUP50-204ENST00000417702 FAM50BQ9Y247 325 aa16.97■□□□□ 0.31
NUP50-204ENST00000417702 VCANP13611 3396 aa16.97■□□□□ 0.31
NUP50-204ENST00000417702 MEIS3P2A8K0S8 358 aa16.96■□□□□ 0.31
NUP50-204ENST00000417702 ZC3H11AO75152 810 aaKnown RBP eCLIP16.96■□□□□ 0.31
NUP50-204ENST00000417702 ITGA4P13612 1032 aa16.96■□□□□ 0.31
NUP50-204ENST00000417702 NCLP19338 710 aaKnown RBP16.96■□□□□ 0.31
NUP50-204ENST00000417702 BCAR1P56945 870 aa16.96■□□□□ 0.31
NUP50-204ENST00000417702 PPP2R5AQ15172 486 aa16.96■□□□□ 0.31
NUP50-204ENST00000417702 IL17AQ16552 155 aa16.96■□□□□ 0.31
NUP50-204ENST00000417702 CTC1Q2NKJ3 1217 aa16.96■□□□□ 0.31
NUP50-204ENST00000417702 AGMOQ6ZNB7 445 aa16.96■□□□□ 0.31
NUP50-204ENST00000417702 BRAPQ7Z569 592 aa16.96■□□□□ 0.31
NUP50-204ENST00000417702 ADGRD2Q7Z7M1 963 aa16.96■□□□□ 0.31
NUP50-204ENST00000417702 HACE1Q8IYU2 909 aa16.96■□□□□ 0.31
NUP50-204ENST00000417702 SLC39A11Q8N1S5 342 aa16.96■□□□□ 0.31
NUP50-204ENST00000417702 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.96■□□□□ 0.31
NUP50-204ENST00000417702 DEPTORQ8TB45 409 aa16.96■□□□□ 0.31
NUP50-204ENST00000417702 TRIM6Q9C030 488 aaPredicted RBP16.96■□□□□ 0.31
NUP50-204ENST00000417702 CSRNP2Q9H175 543 aa16.96■□□□□ 0.31
NUP50-204ENST00000417702 TLE6Q9H808 572 aa16.96■□□□□ 0.31
NUP50-204ENST00000417702 ENTPD7Q9NQZ7 604 aa16.96■□□□□ 0.31
NUP50-204ENST00000417702 TBC1D13Q9NVG8 400 aa16.96■□□□□ 0.31
NUP50-204ENST00000417702 PRMT7Q9NVM4 692 aaPredicted RBP16.96■□□□□ 0.31
NUP50-204ENST00000417702 PP2D1A8MPX8 630 aa16.95■□□□□ 0.3
NUP50-204ENST00000417702 ARF4P18085 180 aaPredicted RBP16.95■□□□□ 0.3
NUP50-204ENST00000417702 GTF2F1P35269 517 aaKnown RBP eCLIP16.95■□□□□ 0.34e-6■■■■□ 25.2
NUP50-204ENST00000417702 NRIP1P48552 1158 aa16.95■□□□□ 0.3
NUP50-204ENST00000417702 NDUFV1P49821 464 aa16.95■□□□□ 0.3
NUP50-204ENST00000417702 ERVFC1P60507 584 aa16.95■□□□□ 0.3
NUP50-204ENST00000417702 BMS1Q14692 1282 aaKnown RBP16.95■□□□□ 0.3
NUP50-204ENST00000417702 ZRSR1Q15695 479 aaKnown RBP16.95■□□□□ 0.3
NUP50-204ENST00000417702 AMHR2Q16671 573 aa16.95■□□□□ 0.3
NUP50-204ENST00000417702 ARL6IP4Q66PJ3 421 aaKnown RBP16.95■□□□□ 0.3
NUP50-204ENST00000417702 RBM23Q86U06 439 aaKnown RBP16.95■□□□□ 0.3
NUP50-204ENST00000417702 EFHBQ8N7U6 833 aa16.95■□□□□ 0.3
NUP50-204ENST00000417702 KIFAP3Q92845 792 aa16.95■□□□□ 0.3
NUP50-204ENST00000417702 TMEM169Q96HH4 297 aa16.95■□□□□ 0.3
NUP50-204ENST00000417702 IFT74Q96LB3 600 aa16.95■□□□□ 0.3
NUP50-204ENST00000417702 PRIMPOLQ96LW4 560 aa16.95■□□□□ 0.3
NUP50-204ENST00000417702 FAM193BQ96PV7 902 aaPredicted RBP16.95■□□□□ 0.3
NUP50-204ENST00000417702 TCF25Q9BQ70 676 aa16.95■□□□□ 0.3
NUP50-204ENST00000417702 EIF2AQ9BY44 585 aaKnown RBP16.95■□□□□ 0.3
NUP50-204ENST00000417702 GBP3Q9H0R5 595 aa16.95■□□□□ 0.3
NUP50-204ENST00000417702 NGRNQ9NPE2 291 aaKnown RBP16.95■□□□□ 0.3
NUP50-204ENST00000417702 IPPQ9Y573 584 aa16.95■□□□□ 0.3
NUP50-204ENST00000417702 PCDHGC5Q9Y5F6 944 aa16.95■□□□□ 0.3
NUP50-204ENST00000417702 FSD2A1L4K1 749 aa16.94■□□□□ 0.3
NUP50-204ENST00000417702 VPS37CA5D8V6 355 aaPredicted RBP16.94■□□□□ 0.3
NUP50-204ENST00000417702 VWA3AA6NCI4 1184 aa16.94■□□□□ 0.3
NUP50-204ENST00000417702 NT5C1B-RDH14C9J2C7 533 aa16.94■□□□□ 0.3
NUP50-204ENST00000417702 FSCN2O14926 492 aa16.94■□□□□ 0.3
NUP50-204ENST00000417702 B4GALT5O43286 388 aa16.94■□□□□ 0.3
NUP50-204ENST00000417702 EYA4O95677 639 aa16.94■□□□□ 0.3
NUP50-204ENST00000417702 BMP15O95972 392 aa16.94■□□□□ 0.3
NUP50-204ENST00000417702 CDC25AP30304 524 aa16.94■□□□□ 0.3
NUP50-204ENST00000417702 LTBRP36941 435 aa16.94■□□□□ 0.3
NUP50-204ENST00000417702 NAMPTP43490 491 aa16.94■□□□□ 0.3
NUP50-204ENST00000417702 ADAM15Q13444 863 aa16.94■□□□□ 0.3
NUP50-204ENST00000417702 MAPK6Q16659 721 aa16.94■□□□□ 0.3
NUP50-204ENST00000417702 TMEM132AQ24JP5 1023 aa16.94■□□□□ 0.3
NUP50-204ENST00000417702 PLPP4Q5VZY2 271 aa16.94■□□□□ 0.3
NUP50-204ENST00000417702 CDCA2Q69YH5 1023 aaPredicted RBP16.94■□□□□ 0.3
NUP50-204ENST00000417702 PPP4R3CPQ6ZMV5 832 aa16.94■□□□□ 0.3
NUP50-204ENST00000417702 TMC7Q7Z402 723 aa16.94■□□□□ 0.3
NUP50-204ENST00000417702 SMG8Q8ND04 991 aaKnown RBP16.94■□□□□ 0.3
NUP50-204ENST00000417702 BSNDQ8WZ55 320 aa16.94■□□□□ 0.3
NUP50-204ENST00000417702 CDCA3Q99618 268 aaPredicted RBP16.94■□□□□ 0.3
NUP50-204ENST00000417702 NRDE2Q9H7Z3 1164 aa16.94■□□□□ 0.3
NUP50-204ENST00000417702 REV3LO60673 3130 aa16.94■□□□□ 0.3
NUP50-204ENST00000417702 A0A1B0GUA9 196 aa16.93■□□□□ 0.3
NUP50-204ENST00000417702 GRXCR2A6NFK2 248 aa16.93■□□□□ 0.3
NUP50-204ENST00000417702 E9PMD0 336 aa16.93■□□□□ 0.3
NUP50-204ENST00000417702 GALTP07902 379 aa16.93■□□□□ 0.3
NUP50-204ENST00000417702 FAM187BQ17R55 369 aa16.93■□□□□ 0.3
NUP50-204ENST00000417702 SLC27A1Q6PCB7 646 aa16.93■□□□□ 0.3
NUP50-204ENST00000417702 CDK5RAP3Q96JB5 506 aa16.93■□□□□ 0.3
NUP50-204ENST00000417702 MMTAG2Q9BU76 263 aaKnown RBP16.93■□□□□ 0.3
NUP50-204ENST00000417702 APOL6Q9BWW8 343 aa16.93■□□□□ 0.3
NUP50-204ENST00000417702 NT5C3AQ9H0P0 336 aa16.93■□□□□ 0.3
NUP50-204ENST00000417702 FZD8Q9H461 694 aa16.93■□□□□ 0.3
NUP50-204ENST00000417702 PLXNA4Q9HCM2 1894 aa16.93■□□□□ 0.3
NUP50-204ENST00000417702 ATG2AQ2TAZ0 1938 aa16.92■□□□□ 0.3
NUP50-204ENST00000417702 PER2O15055 1255 aa16.92■□□□□ 0.3
NUP50-204ENST00000417702 LINC01565O15544 149 aa16.92■□□□□ 0.3
NUP50-204ENST00000417702 TBX10O75333 385 aa16.92■□□□□ 0.3
NUP50-204ENST00000417702 NPTXRO95502 500 aa16.92■□□□□ 0.3
NUP50-204ENST00000417702 POMCP01189 267 aa16.92■□□□□ 0.3
NUP50-204ENST00000417702 PRKCBP05771 671 aa16.92■□□□□ 0.3
NUP50-204ENST00000417702 IL9P15248 144 aa16.92■□□□□ 0.3
NUP50-204ENST00000417702 LIG1P18858 919 aa16.92■□□□□ 0.3
NUP50-204ENST00000417702 EFNA5P52803 228 aa16.92■□□□□ 0.3
NUP50-204ENST00000417702 DLX2Q07687 328 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms