RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 MCAMP43121 646 aa5.68□□□□□ -1.5
RNU6-560P-201ENST00000364007 PPP2CBP62714 309 aa5.68□□□□□ -1.5
RNU6-560P-201ENST00000364007 PPP2CAP67775 309 aa5.68□□□□□ -1.5
RNU6-560P-201ENST00000364007 ADAM8P78325 824 aa5.68□□□□□ -1.5
RNU6-560P-201ENST00000364007 JAG1P78504 1218 aa5.68□□□□□ -1.5
RNU6-560P-201ENST00000364007 KIF23Q02241 960 aaPredicted RBP5.68□□□□□ -1.5
RNU6-560P-201ENST00000364007 MALLQ13021 153 aa5.68□□□□□ -1.5
RNU6-560P-201ENST00000364007 NFYCQ13952 458 aa5.68□□□□□ -1.5
RNU6-560P-201ENST00000364007 MUM1L1Q5H9M0 696 aa5.68□□□□□ -1.5
RNU6-560P-201ENST00000364007 KRTAP19-1Q8IUB9 90 aa5.68□□□□□ -1.5
RNU6-560P-201ENST00000364007 ANKRD53Q8N9V6 530 aa5.68□□□□□ -1.5
RNU6-560P-201ENST00000364007 OR2I1PQ8NGU4 316 aa5.68□□□□□ -1.5
RNU6-560P-201ENST00000364007 NRG4Q8WWG1 115 aa5.68□□□□□ -1.5
RNU6-560P-201ENST00000364007 SSH1Q8WYL5 1049 aa5.68□□□□□ -1.5
RNU6-560P-201ENST00000364007 TSR2Q969E8 191 aaKnown RBP5.68□□□□□ -1.5
RNU6-560P-201ENST00000364007 SLC7A6OSQ96CW6 309 aaPredicted RBP5.68□□□□□ -1.5
RNU6-560P-201ENST00000364007 CDH19Q9H159 772 aa5.68□□□□□ -1.5
RNU6-560P-201ENST00000364007 GREM2Q9H772 168 aa5.68□□□□□ -1.5
RNU6-560P-201ENST00000364007 AKR1B10O60218 316 aa5.67□□□□□ -1.5
RNU6-560P-201ENST00000364007 ALDH1A2O94788 518 aa5.67□□□□□ -1.5
RNU6-560P-201ENST00000364007 TOX4O94842 621 aa5.67□□□□□ -1.5
RNU6-560P-201ENST00000364007 SAFB2Q14151 953 aaKnown RBP eCLIP5.67□□□□□ -1.5
RNU6-560P-201ENST00000364007 NOMO1Q15155 1222 aa5.67□□□□□ -1.5
RNU6-560P-201ENST00000364007 TMEM240Q5SV17 173 aa5.67□□□□□ -1.5
RNU6-560P-201ENST00000364007 ARHGEF18Q6ZSZ5 1173 aa5.67□□□□□ -1.5
RNU6-560P-201ENST00000364007 THEMISQ8N1K5 641 aaPredicted RBP5.67□□□□□ -1.5
RNU6-560P-201ENST00000364007 GPR156Q8NFN8 814 aa5.67□□□□□ -1.5
RNU6-560P-201ENST00000364007 SNX33Q8WV41 574 aa5.67□□□□□ -1.5
RNU6-560P-201ENST00000364007 JPH3Q8WXH2 748 aaPredicted RBP5.67□□□□□ -1.5
RNU6-560P-201ENST00000364007 LPPQ93052 612 aa5.67□□□□□ -1.5
RNU6-560P-201ENST00000364007 COA7Q96BR5 231 aa5.67□□□□□ -1.5
RNU6-560P-201ENST00000364007 NEIL1Q96FI4 390 aaPredicted RBP5.67□□□□□ -1.5
RNU6-560P-201ENST00000364007 LRRC37BQ96QE4 947 aa5.67□□□□□ -1.5
RNU6-560P-201ENST00000364007 GPHA2Q96T91 129 aa5.67□□□□□ -1.5
RNU6-560P-201ENST00000364007 SLC6A15Q9H2J7 730 aa5.67□□□□□ -1.5
RNU6-560P-201ENST00000364007 C12orf65Q9H3J6 166 aaKnown RBP5.67□□□□□ -1.5
RNU6-560P-201ENST00000364007 AGO3Q9H9G7 860 aaKnown RBP5.67□□□□□ -1.5
RNU6-560P-201ENST00000364007 TCF7L1Q9HCS4 588 aa5.67□□□□□ -1.5
RNU6-560P-201ENST00000364007 PARD6AQ9NPB6 346 aa5.67□□□□□ -1.5
RNU6-560P-201ENST00000364007 TLR9Q9NR96 1032 aa5.67□□□□□ -1.5
RNU6-560P-201ENST00000364007 TCEAL9Q9UHQ7 104 aa5.67□□□□□ -1.5
RNU6-560P-201ENST00000364007 NOB1Q9ULX3 412 aaKnown RBP5.67□□□□□ -1.5
RNU6-560P-201ENST00000364007 E2F8A0AVK6 867 aa5.66□□□□□ -1.5
RNU6-560P-201ENST00000364007 PRPF3O43395 683 aaKnown RBP5.66□□□□□ -1.5
RNU6-560P-201ENST00000364007 PRICKLE3O43900 615 aaPredicted RBP5.66□□□□□ -1.5
RNU6-560P-201ENST00000364007 IL33O95760 270 aa5.66□□□□□ -1.5
RNU6-560P-201ENST00000364007 SCGB1D2O95969 90 aa5.66□□□□□ -1.5
RNU6-560P-201ENST00000364007 HMGB1P09429 215 aaKnown RBP5.66□□□□□ -1.5
RNU6-560P-201ENST00000364007 VSIG10L2P0DP72 767 aa5.66□□□□□ -1.5
RNU6-560P-201ENST00000364007 EDNRBP24530 442 aa5.66□□□□□ -1.5
RNU6-560P-201ENST00000364007 RAC3P60763 192 aa5.66□□□□□ -1.5
RNU6-560P-201ENST00000364007 SEPT2Q15019 361 aa5.66□□□□□ -1.5
RNU6-560P-201ENST00000364007 PPP2R5AQ15172 486 aa5.66□□□□□ -1.5
RNU6-560P-201ENST00000364007 ZNF568Q3ZCX4 644 aa5.66□□□□□ -1.5
RNU6-560P-201ENST00000364007 Q6ZVL8 140 aa5.66□□□□□ -1.5
RNU6-560P-201ENST00000364007 FMNL3Q8IVF7 1028 aa5.66□□□□□ -1.5
RNU6-560P-201ENST00000364007 TPH2Q8IWU9 490 aa5.66□□□□□ -1.5
RNU6-560P-201ENST00000364007 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.66□□□□□ -1.5
RNU6-560P-201ENST00000364007 HSPBAP1Q96EW2 488 aa5.66□□□□□ -1.5
RNU6-560P-201ENST00000364007 GNRHR2Q96P88 292 aa5.66□□□□□ -1.5
RNU6-560P-201ENST00000364007 LMF1Q96S06 567 aa5.66□□□□□ -1.5
RNU6-560P-201ENST00000364007 DPYSL5Q9BPU6 564 aa5.66□□□□□ -1.5
RNU6-560P-201ENST00000364007 ADI1Q9BV57 179 aa5.66□□□□□ -1.5
RNU6-560P-201ENST00000364007 C14orf93Q9H972 538 aaKnown RBP5.66□□□□□ -1.5
RNU6-560P-201ENST00000364007 RBM12Q9NTZ6 932 aaKnown RBP5.66□□□□□ -1.5
RNU6-560P-201ENST00000364007 NCDNQ9UBB6 729 aa5.66□□□□□ -1.5
RNU6-560P-201ENST00000364007 PUF60Q9UHX1 559 aaKnown RBP5.66□□□□□ -1.5
RNU6-560P-201ENST00000364007 INTUQ9ULD6 942 aa5.66□□□□□ -1.5
RNU6-560P-201ENST00000364007 ZBTB21Q9ULJ3 1066 aa5.66□□□□□ -1.5
RNU6-560P-201ENST00000364007 LIMCH1Q9UPQ0 1083 aa5.66□□□□□ -1.5
RNU6-560P-201ENST00000364007 ANKRD6Q9Y2G4 727 aa5.66□□□□□ -1.5
RNU6-560P-201ENST00000364007 GIT1Q9Y2X7 761 aa5.66□□□□□ -1.5
RNU6-560P-201ENST00000364007 RPTORQ8N122 1335 aa5.66□□□□□ -1.5
RNU6-560P-201ENST00000364007 CT47B1P0C2W7 299 aaPredicted RBP5.65□□□□□ -1.5
RNU6-560P-201ENST00000364007 ADKP55263 362 aaKnown RBP5.65□□□□□ -1.5
RNU6-560P-201ENST00000364007 MEF2AQ02078 507 aaPredicted RBP5.65□□□□□ -1.5
RNU6-560P-201ENST00000364007 UAP1L1Q3KQV9 507 aa5.65□□□□□ -1.5
RNU6-560P-201ENST00000364007 KRTAP19-4Q3LI73 84 aa5.65□□□□□ -1.5
RNU6-560P-201ENST00000364007 C19orf54Q5BKX5 351 aa5.65□□□□□ -1.5
RNU6-560P-201ENST00000364007 KRT40Q6A162 431 aa5.65□□□□□ -1.5
RNU6-560P-201ENST00000364007 PLEKHH3Q7Z736 793 aa5.65□□□□□ -1.5
RNU6-560P-201ENST00000364007 ADGRE4PQ86SQ3 457 aa5.65□□□□□ -1.5
RNU6-560P-201ENST00000364007 GPR135Q8IZ08 494 aa5.65□□□□□ -1.5
RNU6-560P-201ENST00000364007 CHPFQ8IZ52 775 aa5.65□□□□□ -1.5
RNU6-560P-201ENST00000364007 LILRA3Q8N6C8 439 aaPredicted RBP5.65□□□□□ -1.5
RNU6-560P-201ENST00000364007 KRTAP4-12Q9BQ66 201 aa5.65□□□□□ -1.5
RNU6-560P-201ENST00000364007 JADE2Q9NQC1 790 aa5.65□□□□□ -1.5
RNU6-560P-201ENST00000364007 PPP4R1LQ9P1A2 415 aa5.65□□□□□ -1.5
RNU6-560P-201ENST00000364007 CCDC154A6NI56 674 aa5.64□□□□□ -1.51
RNU6-560P-201ENST00000364007 HTRA2O43464 458 aaPredicted RBP5.64□□□□□ -1.51
RNU6-560P-201ENST00000364007 LAMTOR5O43504 91 aa5.64□□□□□ -1.51
RNU6-560P-201ENST00000364007 SLC26A4O43511 780 aa5.64□□□□□ -1.51
RNU6-560P-201ENST00000364007 TSPAN6O43657 245 aa5.64□□□□□ -1.51
RNU6-560P-201ENST00000364007 JUNP05412 331 aaKnown RBP5.64□□□□□ -1.51
RNU6-560P-201ENST00000364007 CR2P20023 1033 aa5.64□□□□□ -1.51
RNU6-560P-201ENST00000364007 CASRP41180 1078 aa5.64□□□□□ -1.51
RNU6-560P-201ENST00000364007 FXR1P51114 621 aaKnown RBP eCLIP5.64□□□□□ -1.51
RNU6-560P-201ENST00000364007 EPHB4P54760 987 aa5.64□□□□□ -1.51
RNU6-560P-201ENST00000364007 IL10RAQ13651 578 aa5.64□□□□□ -1.51
RNU6-560P-201ENST00000364007 C3orf36Q3SXR2 165 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms