RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 TTC26A0AVF1 554 aa25.31■■□□□ 1.64
SDF4-202ENST00000360001 RRN3P2A6NIE6 340 aa25.31■■□□□ 1.64
SDF4-202ENST00000360001 MAPK13O15264 365 aa25.31■■□□□ 1.64
SDF4-202ENST00000360001 TPM1P09493 284 aa25.31■■□□□ 1.64
SDF4-202ENST00000360001 PSEN2P49810 448 aa25.31■■□□□ 1.64
SDF4-202ENST00000360001 LIG4P49917 911 aa25.31■■□□□ 1.64
SDF4-202ENST00000360001 KCNMA1Q12791 1236 aa25.31■■□□□ 1.64
SDF4-202ENST00000360001 TFDP1Q14186 410 aa25.31■■□□□ 1.64
SDF4-202ENST00000360001 TCERG1LQ5VWI1 586 aa25.31■■□□□ 1.64
SDF4-202ENST00000360001 CNGA4Q8IV77 575 aa25.31■■□□□ 1.64
SDF4-202ENST00000360001 LMBR1Q8WVP7 490 aa25.31■■□□□ 1.64
SDF4-202ENST00000360001 PCMTD1Q96MG8 357 aaPredicted RBP25.31■■□□□ 1.64
SDF4-202ENST00000360001 NLRP4Q96MN2 994 aa25.31■■□□□ 1.64
SDF4-202ENST00000360001 NUP58Q9BVL2 599 aa25.31■■□□□ 1.64
SDF4-202ENST00000360001 UPF3AQ9H1J1 476 aaKnown RBP25.31■■□□□ 1.64
SDF4-202ENST00000360001 SAGE1Q9NXZ1 904 aa25.31■■□□□ 1.64
SDF4-202ENST00000360001 STYXL1Q9Y6J8 313 aa25.31■■□□□ 1.64
SDF4-202ENST00000360001 C6orf222P0C671 652 aaPredicted RBP25.31■■□□□ 1.64
SDF4-202ENST00000360001 PRKAR2AP13861 404 aaKnown RBP25.31■■□□□ 1.64
SDF4-202ENST00000360001 BFSP1Q12934 665 aa25.31■■□□□ 1.64
SDF4-202ENST00000360001 FIGNQ5HY92 759 aa25.31■■□□□ 1.64
SDF4-202ENST00000360001 TMEM139Q8IV31 216 aa25.31■■□□□ 1.64
SDF4-202ENST00000360001 ZBTB8OSQ8IWT0 167 aa25.31■■□□□ 1.64
SDF4-202ENST00000360001 POMGNT1Q8WZA1 660 aa25.31■■□□□ 1.64
SDF4-202ENST00000360001 PANX2Q96RD6 677 aa25.31■■□□□ 1.64
SDF4-202ENST00000360001 C2orf40Q9H1Z8 148 aa25.31■■□□□ 1.64
SDF4-202ENST00000360001 MSCO60682 206 aa25.3■■□□□ 1.64
SDF4-202ENST00000360001 GNRH1P01148 92 aa25.3■■□□□ 1.64
SDF4-202ENST00000360001 TMOD1P28289 359 aa25.3■■□□□ 1.64
SDF4-202ENST00000360001 CCND3P30281 292 aaPredicted RBP25.3■■□□□ 1.64
SDF4-202ENST00000360001 CHMP4BP1P59074 171 aa25.3■■□□□ 1.64
SDF4-202ENST00000360001 PURAQ00577 322 aaKnown RBP25.3■■□□□ 1.64
SDF4-202ENST00000360001 KIAA1524Q8TCG1 905 aa25.3■■□□□ 1.64
SDF4-202ENST00000360001 SAAL1Q96ER3 474 aa25.3■■□□□ 1.64
SDF4-202ENST00000360001 ZNF668Q96K58 619 aaPredicted RBP25.3■■□□□ 1.64
SDF4-202ENST00000360001 FBXL18Q96ME1 805 aa25.3■■□□□ 1.64
SDF4-202ENST00000360001 TARS2Q9BW92 718 aaKnown RBP25.3■■□□□ 1.64
SDF4-202ENST00000360001 CAPN11Q9UMQ6 739 aa25.3■■□□□ 1.64
SDF4-202ENST00000360001 NRCAMQ92823 1304 aa25.3■■□□□ 1.64
SDF4-202ENST00000360001 GOLGA8IPA6NC78 632 aa25.29■■□□□ 1.64
SDF4-202ENST00000360001 GOLGA8JA6NMD2 632 aa25.29■■□□□ 1.64
SDF4-202ENST00000360001 TRIM21P19474 475 aaKnown RBP25.29■■□□□ 1.64
SDF4-202ENST00000360001 NKX3-2P78367 333 aa25.29■■□□□ 1.64
SDF4-202ENST00000360001 INTS8Q75QN2 995 aaKnown RBP25.29■■□□□ 1.64
SDF4-202ENST00000360001 CCDC112Q8NEF3 446 aa25.29■■□□□ 1.64
SDF4-202ENST00000360001 PPP1R13LQ8WUF5 828 aa25.29■■□□□ 1.64
SDF4-202ENST00000360001 ERO1AQ96HE7 468 aa25.29■■□□□ 1.64
SDF4-202ENST00000360001 MMRN2Q9H8L6 949 aa25.29■■□□□ 1.64
SDF4-202ENST00000360001 FKTNO75072 461 aa25.29■■□□□ 1.64
SDF4-202ENST00000360001 ADRB2P07550 413 aa25.29■■□□□ 1.64
SDF4-202ENST00000360001 RARBP10826 455 aa25.29■■□□□ 1.64
SDF4-202ENST00000360001 PTENP60484 403 aa25.29■■□□□ 1.64
SDF4-202ENST00000360001 POU5F1BQ06416 359 aa25.29■■□□□ 1.64
SDF4-202ENST00000360001 CBWD2Q8IUF1 395 aa25.29■■□□□ 1.64
SDF4-202ENST00000360001 ZNF296Q8WUU4 475 aaPredicted RBP25.29■■□□□ 1.64
SDF4-202ENST00000360001 CCDC51Q96ER9 411 aa25.29■■□□□ 1.64
SDF4-202ENST00000360001 NFKBIZQ9BYH8 718 aa25.29■■□□□ 1.64
SDF4-202ENST00000360001 AKT3Q9Y243 479 aa25.29■■□□□ 1.64
SDF4-202ENST00000360001 TTLL13PA6NNM8 815 aa25.28■■□□□ 1.64
SDF4-202ENST00000360001 EPHB6O15197 1021 aa25.28■■□□□ 1.64
SDF4-202ENST00000360001 PGK1P00558 417 aa25.28■■□□□ 1.64
SDF4-202ENST00000360001 HMGCRP04035 888 aa25.28■■□□□ 1.64
SDF4-202ENST00000360001 MCCD1P59942 119 aaPredicted RBP25.28■■□□□ 1.64
SDF4-202ENST00000360001 SNRNP35Q16560 246 aaKnown RBP25.28■■□□□ 1.64
SDF4-202ENST00000360001 MAP3K21Q5TCX8 1036 aa25.28■■□□□ 1.64
SDF4-202ENST00000360001 NFRKBQ6P4R8 1299 aa25.28■■□□□ 1.64
SDF4-202ENST00000360001 CRACR2AQ9BSW2 395 aa25.28■■□□□ 1.64
SDF4-202ENST00000360001 KATNAL1Q9BW62 490 aa25.28■■□□□ 1.64
SDF4-202ENST00000360001 HAPLN2Q9GZV7 340 aa25.28■■□□□ 1.64
SDF4-202ENST00000360001 IFT122Q9HBG6 1241 aa25.28■■□□□ 1.64
SDF4-202ENST00000360001 FAM207AQ9NSI2 230 aaPredicted RBP25.28■■□□□ 1.64
SDF4-202ENST00000360001 KPNA6O60684 536 aa25.27■■□□□ 1.64
SDF4-202ENST00000360001 VTNP04004 478 aa25.27■■□□□ 1.64
SDF4-202ENST00000360001 PRKCBP05771 671 aa25.27■■□□□ 1.64
SDF4-202ENST00000360001 TRIM49P0CI25 452 aa25.27■■□□□ 1.64
SDF4-202ENST00000360001 TRIM49CP0CI26 452 aa25.27■■□□□ 1.64
SDF4-202ENST00000360001 KRT13P13646 458 aa25.27■■□□□ 1.64
SDF4-202ENST00000360001 KRT9P35527 623 aa25.27■■□□□ 1.64
SDF4-202ENST00000360001 ADAM17P78536 824 aa25.27■■□□□ 1.64
SDF4-202ENST00000360001 HIC1Q14526 733 aa25.27■■□□□ 1.64
SDF4-202ENST00000360001 MAPK6Q16659 721 aa25.27■■□□□ 1.64
SDF4-202ENST00000360001 GNASQ5JWF2 1037 aa25.27■■□□□ 1.64
SDF4-202ENST00000360001 ZPBP2Q6X784 338 aa25.27■■□□□ 1.64
SDF4-202ENST00000360001 KIAA0319LQ8IZA0 1049 aa25.27■■□□□ 1.64
SDF4-202ENST00000360001 RAET1EQ8TD07 263 aa25.27■■□□□ 1.64
SDF4-202ENST00000360001 IQCDQ96DY2 449 aa25.27■■□□□ 1.64
SDF4-202ENST00000360001 ABHD10Q9NUJ1 306 aa25.27■■□□□ 1.64
SDF4-202ENST00000360001 LUC7L2Q9Y383 392 aaKnown RBP25.27■■□□□ 1.64
SDF4-202ENST00000360001 MBLAC1A4D2B0 266 aaPredicted RBP25.27■■□□□ 1.64
SDF4-202ENST00000360001 IFNLR1Q8IU57 520 aaPredicted RBP25.27■■□□□ 1.64
SDF4-202ENST00000360001 PLEKHO2Q8TD55 490 aa25.27■■□□□ 1.64
SDF4-202ENST00000360001 PXYLP1Q8TE99 480 aa25.27■■□□□ 1.64
SDF4-202ENST00000360001 ZBTB45Q96K62 511 aaPredicted RBP25.27■■□□□ 1.64
SDF4-202ENST00000360001 BAG1Q99933 345 aaPredicted RBP25.27■■□□□ 1.64
SDF4-202ENST00000360001 MRPL4Q9BYD3 311 aaKnown RBP25.27■■□□□ 1.64
SDF4-202ENST00000360001 FZD8Q9H461 694 aa25.27■■□□□ 1.64
SDF4-202ENST00000360001 MINDY3Q9H8M7 445 aa25.27■■□□□ 1.64
SDF4-202ENST00000360001 AGPAT5Q9NUQ2 364 aa25.27■■□□□ 1.64
SDF4-202ENST00000360001 A0A1W2PQJ5 194 aa25.26■■□□□ 1.63
SDF4-202ENST00000360001 NRDCO43847 1150 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms