RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 CABP7Q86V35 215 aa5.35□□□□□ -1.55
SKP1-202ENST00000353411 ATL2Q8NHH9 583 aa5.35□□□□□ -1.55
SKP1-202ENST00000353411 DPF2Q92785 391 aa5.35□□□□□ -1.55
SKP1-202ENST00000353411 PBXIP1Q96AQ6 731 aa5.35□□□□□ -1.55
SKP1-202ENST00000353411 MLXIPQ9HAP2 919 aa5.35□□□□□ -1.55
SKP1-202ENST00000353411 AK5Q9Y6K8 562 aa5.35□□□□□ -1.55
SKP1-202ENST00000353411 MBD5Q9P267 1494 aa5.35□□□□□ -1.55
SKP1-202ENST00000353411 KDM3AQ9Y4C1 1321 aa5.35□□□□□ -1.55
SKP1-202ENST00000353411 CCDC162PA2VCL2 907 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 TEX33O43247 280 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 VAV1P15498 845 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 FNTAP49354 379 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 SNX16P57768 344 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 STK4Q13043 487 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 C16orf89Q6UX73 402 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 TAS2R42Q7RTR8 314 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 NEK8Q86SG6 692 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 MREGQ8N565 214 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 BORCS5Q969J3 196 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 SNF8Q96H20 258 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 TSSK1BQ9BXA7 367 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 MLXIPLQ9NP71 852 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 NPHS2Q9NP85 383 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 KRT82Q9NSB4 513 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 CROTQ9UKG9 612 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 PA2G4Q9UQ80 394 aaKnown RBP5.34□□□□□ -1.55
SKP1-202ENST00000353411 CITO14578 2027 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 CACNA1FO60840 1977 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 WDR91A4D1P6 747 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 UNC5CO95185 931 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 DLGAP3O95886 979 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 HOXB7P09629 217 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 STAMQ92783 540 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 ZFYVE19Q96K21 471 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 PLIN2Q99541 437 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 DDX47Q9H0S4 455 aaKnown RBP5.34□□□□□ -1.55
SKP1-202ENST00000353411 ATP6V1HQ9UI12 483 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 BAG5Q9UL15 447 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 PREX2Q70Z35 1606 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 SSU72P8A0A1W2PR75 194 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 NOP56O00567 594 aaKnown RBP5.34□□□□□ -1.55
SKP1-202ENST00000353411 COPEO14579 308 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 OLR1P78380 273 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 TNNI3KQ59H18 835 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 KIAA1755Q5JYT7 1200 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 PPP1R2P3Q6NXS1 205 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 DPH6Q7L8W6 267 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 SMYD4Q8IYR2 804 aaPredicted RBP5.34□□□□□ -1.55
SKP1-202ENST00000353411 USP38Q8NB14 1042 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 EMC3Q9P0I2 261 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 CHPF2Q9P2E5 772 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 FPGT-TNNI3KV9GXZ4 949 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 A0A1W2PQJ5 194 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 DNALI1O14645 258 aaPredicted RBP5.34□□□□□ -1.55
SKP1-202ENST00000353411 RHOBTB1O94844 696 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 ZNF18P17022 549 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 NR1H2P55055 460 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 GALNT17Q6IS24 598 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.34□□□□□ -1.55
SKP1-202ENST00000353411 RASSF5Q8WWW0 418 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 ACSBG1Q96GR2 724 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 SELENONQ9NZV5 590 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 RABL2AQ9UBK7 228 aaPredicted RBP5.34□□□□□ -1.55
SKP1-202ENST00000353411 SPAG17Q6Q759 2223 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 B2RBV5 119 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 CCNT1O60563 726 aaKnown RBP5.34□□□□□ -1.55
SKP1-202ENST00000353411 DDHD2O94830 711 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 IFNB1P01574 187 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 ITGA7Q13683 1181 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 KRT27Q7Z3Y8 459 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 CATSPER3Q86XQ3 398 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 PIH1D3Q9NQM4 214 aaKnown RBP5.34□□□□□ -1.55
SKP1-202ENST00000353411 RAD51CO43502 376 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 GYPCP04921 128 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 ATP5BP06576 529 aaKnown RBP5.34□□□□□ -1.55
SKP1-202ENST00000353411 KRT16P08779 473 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 SMARCA1P28370 1054 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 USP46P62068 366 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 BTKQ06187 659 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 PPP6R3Q5H9R7 873 aaPredicted RBP5.34□□□□□ -1.55
SKP1-202ENST00000353411 UNC13DQ70J99 1090 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 UNC5CLQ8IV45 518 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 QKIQ96PU8 341 aaKnown RBP eCLIP5.34□□□□□ -1.552e-6■■■■□ 25.1
SKP1-202ENST00000353411 BTBD10Q9BSF8 475 aa5.34□□□□□ -1.55
SKP1-202ENST00000353411 EVPLLA8MZ36 301 aa5.34□□□□□ -1.56
SKP1-202ENST00000353411 LDHAP00338 332 aaKnown RBP5.34□□□□□ -1.56
SKP1-202ENST00000353411 ENO1P06733 434 aaKnown RBP5.34□□□□□ -1.56
SKP1-202ENST00000353411 FLOT2Q14254 428 aa5.34□□□□□ -1.56
SKP1-202ENST00000353411 ALKBH5Q6P6C2 394 aaKnown RBP5.34□□□□□ -1.56
SKP1-202ENST00000353411 MIGA2Q7L4E1 593 aa5.34□□□□□ -1.56
SKP1-202ENST00000353411 KRT25Q7Z3Z0 450 aa5.34□□□□□ -1.56
SKP1-202ENST00000353411 MDM1Q8TC05 714 aa5.34□□□□□ -1.56
SKP1-202ENST00000353411 EPS8L2Q9H6S3 715 aa5.34□□□□□ -1.56
SKP1-202ENST00000353411 ITM2BQ9Y287 266 aa5.34□□□□□ -1.56
SKP1-202ENST00000353411 COL4A3BPQ9Y5P4 624 aa5.34□□□□□ -1.56
SKP1-202ENST00000353411 BCL10O95999 233 aa5.34□□□□□ -1.56
SKP1-202ENST00000353411 KDSRQ06136 332 aa5.34□□□□□ -1.56
SKP1-202ENST00000353411 JADE1Q6IE81 842 aa5.34□□□□□ -1.56
SKP1-202ENST00000353411 TTC33Q6PID6 262 aaPredicted RBP5.34□□□□□ -1.56
SKP1-202ENST00000353411 PLD3Q8IV08 490 aa5.34□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms