RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 TMEM174Q8WUU8 243 aa16.09■□□□□ 0.17
CXCL12-201ENST00000343575 HVCN1Q96D96 273 aa16.09■□□□□ 0.17
CXCL12-201ENST00000343575 ZNF668Q96K58 619 aaPredicted RBP16.09■□□□□ 0.17
CXCL12-201ENST00000343575 JPH2Q9BR39 696 aaPredicted RBP16.09■□□□□ 0.17
CXCL12-201ENST00000343575 TMEM206Q9H813 350 aa16.09■□□□□ 0.17
CXCL12-201ENST00000343575 TTLL13PA6NNM8 815 aa16.08■□□□□ 0.17
CXCL12-201ENST00000343575 CALUO43852 315 aaPredicted RBP16.08■□□□□ 0.17
CXCL12-201ENST00000343575 MARSP56192 900 aaKnown RBP16.08■□□□□ 0.17
CXCL12-201ENST00000343575 CHMP4BP1P59074 171 aa16.08■□□□□ 0.17
CXCL12-201ENST00000343575 TERF2Q15554 542 aa16.08■□□□□ 0.17
CXCL12-201ENST00000343575 KCNA10Q16322 511 aa16.08■□□□□ 0.17
CXCL12-201ENST00000343575 RHPN2Q8IUC4 686 aa16.08■□□□□ 0.17
CXCL12-201ENST00000343575 SH3TC2Q8TF17 1288 aa16.08■□□□□ 0.17
CXCL12-201ENST00000343575 CBWD1Q9BRT8 395 aa16.08■□□□□ 0.17
CXCL12-201ENST00000343575 TUBGCP2Q9BSJ2 902 aa16.08■□□□□ 0.17
CXCL12-201ENST00000343575 CCDC113Q9H0I3 377 aa16.08■□□□□ 0.17
CXCL12-201ENST00000343575 VPS16Q9H269 839 aa16.08■□□□□ 0.17
CXCL12-201ENST00000343575 IFT122Q9HBG6 1241 aa16.08■□□□□ 0.17
CXCL12-201ENST00000343575 HDAC6Q9UBN7 1215 aa16.08■□□□□ 0.17
CXCL12-201ENST00000343575 PTPN22Q9Y2R2 807 aa16.08■□□□□ 0.17
CXCL12-201ENST00000343575 RRN3P2A6NIE6 340 aa16.08■□□□□ 0.16
CXCL12-201ENST00000343575 NRDCO43847 1150 aa16.08■□□□□ 0.16
CXCL12-201ENST00000343575 ASGR1P07306 291 aa16.08■□□□□ 0.16
CXCL12-201ENST00000343575 SRGAP2CP0DJJ0 459 aa16.08■□□□□ 0.16
CXCL12-201ENST00000343575 PBX1P40424 430 aa16.08■□□□□ 0.16
CXCL12-201ENST00000343575 SLC9A9Q8IVB4 645 aa16.08■□□□□ 0.16
CXCL12-201ENST00000343575 SYCP3Q8IZU3 236 aa16.08■□□□□ 0.16
CXCL12-201ENST00000343575 RNF149Q8NC42 400 aa16.08■□□□□ 0.16
CXCL12-201ENST00000343575 RETREG2Q8NC44 543 aa16.08■□□□□ 0.16
CXCL12-201ENST00000343575 DEPTORQ8TB45 409 aa16.08■□□□□ 0.16
CXCL12-201ENST00000343575 BORCS6Q96GS4 357 aa16.08■□□□□ 0.16
CXCL12-201ENST00000343575 DNAH12Q6ZR08 3092 aa16.07■□□□□ 0.16
CXCL12-201ENST00000343575 GRIN2DO15399 1336 aa16.07■□□□□ 0.16
CXCL12-201ENST00000343575 RBAK-RBAKDNI3L0D1 243 aa16.07■□□□□ 0.16
CXCL12-201ENST00000343575 CETN3O15182 167 aa16.07■□□□□ 0.16
CXCL12-201ENST00000343575 KPNA6O60684 536 aa16.07■□□□□ 0.16
CXCL12-201ENST00000343575 SLU7O95391 586 aaKnown RBP16.07■□□□□ 0.16
CXCL12-201ENST00000343575 VTNP04004 478 aa16.07■□□□□ 0.16
CXCL12-201ENST00000343575 IQCF3P0C7M6 154 aa16.07■□□□□ 0.16
CXCL12-201ENST00000343575 SKILP12757 684 aa16.07■□□□□ 0.16
CXCL12-201ENST00000343575 NFRKBQ6P4R8 1299 aa16.07■□□□□ 0.16
CXCL12-201ENST00000343575 RUFY4Q6ZNE9 571 aa16.07■□□□□ 0.16
CXCL12-201ENST00000343575 HS2ST1Q7LGA3 356 aa16.07■□□□□ 0.16
CXCL12-201ENST00000343575 C12orf56Q8IXR9 622 aa16.07■□□□□ 0.16
CXCL12-201ENST00000343575 MTG1Q9BT17 334 aaPredicted RBP16.07■□□□□ 0.16
CXCL12-201ENST00000343575 KATNAL1Q9BW62 490 aa16.07■□□□□ 0.16
CXCL12-201ENST00000343575 TMEM134Q9H6X4 195 aa16.07■□□□□ 0.16
CXCL12-201ENST00000343575 MINDY3Q9H8M7 445 aa16.07■□□□□ 0.16
CXCL12-201ENST00000343575 SPC25Q9HBM1 224 aa16.07■□□□□ 0.16
CXCL12-201ENST00000343575 KCNG1Q9UIX4 513 aa16.07■□□□□ 0.16
CXCL12-201ENST00000343575 K7ERI5 159 aa16.06■□□□□ 0.16
CXCL12-201ENST00000343575 TREHO43280 583 aa16.06■□□□□ 0.16
CXCL12-201ENST00000343575 MSCO60682 206 aa16.06■□□□□ 0.16
CXCL12-201ENST00000343575 FGFR1OPO95684 399 aaKnown RBP16.06■□□□□ 0.16
CXCL12-201ENST00000343575 DNM2P50570 870 aa16.06■□□□□ 0.16
CXCL12-201ENST00000343575 PTENP60484 403 aa16.06■□□□□ 0.16
CXCL12-201ENST00000343575 NBPF20Q3BBV1 942 aa16.06■□□□□ 0.16
CXCL12-201ENST00000343575 VSTM4Q8IW00 320 aa16.06■□□□□ 0.16
CXCL12-201ENST00000343575 FAM114A1Q8IWE2 563 aa16.06■□□□□ 0.16
CXCL12-201ENST00000343575 TRIM59Q8IWR1 403 aa16.06■□□□□ 0.16
CXCL12-201ENST00000343575 CTAGE1Q96RT6 745 aa16.06■□□□□ 0.16
CXCL12-201ENST00000343575 HAPLN2Q9GZV7 340 aa16.06■□□□□ 0.16
CXCL12-201ENST00000343575 PCIF1Q9H4Z3 704 aa16.06■□□□□ 0.16
CXCL12-201ENST00000343575 HMX1Q9NP08 348 aaPredicted RBP16.06■□□□□ 0.16
CXCL12-201ENST00000343575 H0YCG3 227 aa16.05■□□□□ 0.16
CXCL12-201ENST00000343575 ASAP2O43150 1006 aa16.05■□□□□ 0.16
CXCL12-201ENST00000343575 CCP110O43303 1012 aa16.05■□□□□ 0.16
CXCL12-201ENST00000343575 PIGRP01833 764 aa16.05■□□□□ 0.16
CXCL12-201ENST00000343575 NLRP4Q96MN2 994 aa16.05■□□□□ 0.16
CXCL12-201ENST00000343575 PPP1R16BQ96T49 567 aa16.05■□□□□ 0.16
CXCL12-201ENST00000343575 MAGEC2Q9UBF1 373 aaPredicted RBP16.05■□□□□ 0.16
CXCL12-201ENST00000343575 N4BP3O15049 544 aa16.05■□□□□ 0.16
CXCL12-201ENST00000343575 CBFA2T2O43439 604 aa16.05■□□□□ 0.16
CXCL12-201ENST00000343575 RPL13P26373 211 aaKnown RBP16.05■□□□□ 0.16
CXCL12-201ENST00000343575 CYP2J2P51589 502 aa16.05■□□□□ 0.16
CXCL12-201ENST00000343575 POU5F1BQ06416 359 aa16.05■□□□□ 0.16
CXCL12-201ENST00000343575 MYBPC2Q14324 1141 aa16.05■□□□□ 0.16
CXCL12-201ENST00000343575 BMS1Q14692 1282 aaKnown RBP16.05■□□□□ 0.16
CXCL12-201ENST00000343575 IFNLR1Q8IU57 520 aaPredicted RBP16.05■□□□□ 0.16
CXCL12-201ENST00000343575 CCAR2Q8N163 923 aaKnown RBP16.05■□□□□ 0.16
CXCL12-201ENST00000343575 CCDC150Q8NCX0 1101 aa16.05■□□□□ 0.16
CXCL12-201ENST00000343575 GOLGA5Q8TBA6 731 aa16.05■□□□□ 0.16
CXCL12-201ENST00000343575 NFKBIZQ9BYH8 718 aa16.05■□□□□ 0.16
CXCL12-201ENST00000343575 CALCOCO1Q9P1Z2 691 aa16.05■□□□□ 0.16
CXCL12-201ENST00000343575 EXOC7Q9UPT5 735 aa16.05■□□□□ 0.16
CXCL12-201ENST00000343575 AKT3Q9Y243 479 aa16.05■□□□□ 0.16
CXCL12-201ENST00000343575 STYXL1Q9Y6J8 313 aa16.05■□□□□ 0.16
CXCL12-201ENST00000343575 FRMPD3Q5JV73 1810 aa16.05■□□□□ 0.16
CXCL12-201ENST00000343575 PHLPP2Q6ZVD8 1323 aa16.04■□□□□ 0.16
CXCL12-201ENST00000343575 A0A087WZ62 844 aa16.04■□□□□ 0.16
CXCL12-201ENST00000343575 SMIM35A0A1B0GVV1 85 aa16.04■□□□□ 0.16
CXCL12-201ENST00000343575 LGALS16A8MUM7 142 aa16.04■□□□□ 0.16
CXCL12-201ENST00000343575 CSDE1O75534 798 aaKnown RBP16.04■□□□□ 0.16
CXCL12-201ENST00000343575 GNA14O95837 355 aa16.04■□□□□ 0.16
CXCL12-201ENST00000343575 SCP2P22307 547 aa16.04■□□□□ 0.16
CXCL12-201ENST00000343575 MTIF2P46199 727 aaKnown RBP16.04■□□□□ 0.16
CXCL12-201ENST00000343575 SNRPFP62306 86 aaKnown RBP16.04■□□□□ 0.16
CXCL12-201ENST00000343575 MBTD1Q05BQ5 628 aa16.04■□□□□ 0.16
CXCL12-201ENST00000343575 ZBTB45Q96K62 511 aaPredicted RBP16.04■□□□□ 0.16
CXCL12-201ENST00000343575 FDXACB1Q9BRP7 624 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms