RNA–Protein interactions for RNA: ENST00000262215.7

ARFGEF1-201, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF1, Length 7,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-201ENST00000262215 NUP85Q9BW27 656 aa13.21□□□□□ -0.3
ARFGEF1-201ENST00000262215 TMEM245Q9H330 911 aa13.21□□□□□ -0.3
ARFGEF1-201ENST00000262215 GJB4Q9NTQ9 266 aa13.21□□□□□ -0.3
ARFGEF1-201ENST00000262215 NUMBP49757 651 aa13.2□□□□□ -0.3
ARFGEF1-201ENST00000262215 NCAPHQ15003 741 aa13.2□□□□□ -0.3
ARFGEF1-201ENST00000262215 CNGA3Q16281 694 aa13.2□□□□□ -0.3
ARFGEF1-201ENST00000262215 HEATR6Q6AI08 1181 aaKnown RBP13.2□□□□□ -0.3
ARFGEF1-201ENST00000262215 CCDC81Q6ZN84 652 aa13.2□□□□□ -0.3
ARFGEF1-201ENST00000262215 XPO1O14980 1071 aaKnown RBP13.2□□□□□ -0.3
ARFGEF1-201ENST00000262215 KRT7P08729 469 aa13.2□□□□□ -0.3
ARFGEF1-201ENST00000262215 NFKBIAP25963 317 aa13.2□□□□□ -0.3
ARFGEF1-201ENST00000262215 CUL1Q13616 776 aa13.2□□□□□ -0.3
ARFGEF1-201ENST00000262215 CDC37Q16543 378 aaPredicted RBP13.2□□□□□ -0.3
ARFGEF1-201ENST00000262215 PARP9Q8IXQ6 854 aa13.2□□□□□ -0.3
ARFGEF1-201ENST00000262215 LCORLQ8N3X6 602 aa13.2□□□□□ -0.3
ARFGEF1-201ENST00000262215 USP33Q8TEY7 942 aa13.2□□□□□ -0.3
ARFGEF1-201ENST00000262215 TRIM8Q9BZR9 551 aa13.2□□□□□ -0.3
ARFGEF1-201ENST00000262215 LRRC53A6NM62 1247 aa13.2□□□□□ -0.3
ARFGEF1-201ENST00000262215 SLC16A4O15374 487 aa13.2□□□□□ -0.3
ARFGEF1-201ENST00000262215 RFX3P48380 749 aa13.2□□□□□ -0.3
ARFGEF1-201ENST00000262215 AGBL1Q96MI9 1066 aa13.2□□□□□ -0.3
ARFGEF1-201ENST00000262215 TRPC7Q9HCX4 862 aa13.2□□□□□ -0.3
ARFGEF1-201ENST00000262215 ADGRA2Q96PE1 1338 aa13.2□□□□□ -0.3
ARFGEF1-201ENST00000262215 USP27XA6NNY8 438 aa13.2□□□□□ -0.3
ARFGEF1-201ENST00000262215 CLDN3O15551 220 aa13.2□□□□□ -0.3
ARFGEF1-201ENST00000262215 GPATCH4Q5T3I0 446 aaKnown RBP13.2□□□□□ -0.3
ARFGEF1-201ENST00000262215 TEDDM1Q5T9Z0 273 aa13.2□□□□□ -0.3
ARFGEF1-201ENST00000262215 VN1R5Q7Z5H4 357 aa13.2□□□□□ -0.3
ARFGEF1-201ENST00000262215 MFN1Q8IWA4 741 aa13.2□□□□□ -0.3
ARFGEF1-201ENST00000262215 HMBSP08397 361 aa13.2□□□□□ -0.3
ARFGEF1-201ENST00000262215 ALFQ53S48 1182 aa13.2□□□□□ -0.3
ARFGEF1-201ENST00000262215 CAPRIN2Q6IMN6 1127 aaKnown RBP13.2□□□□□ -0.3
ARFGEF1-201ENST00000262215 ASNSD1Q9NWL6 643 aa13.2□□□□□ -0.3
ARFGEF1-201ENST00000262215 GTF2A1LQ9UNN4 478 aa13.2□□□□□ -0.3
ARFGEF1-201ENST00000262215 UBXN8O00124 270 aa13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 IL13P35225 146 aa13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 BAG6P46379 1132 aa13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 SESN2P58004 480 aaPredicted RBP13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 VSTM4Q8IW00 320 aa13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 ZBTB38Q8NAP3 1195 aaPredicted RBP13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 BBS2Q9BXC9 721 aa13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 PCF11O94913 1555 aaKnown RBP13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 CHUKO15111 745 aa13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 HUS1O60921 280 aa13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 PLIN5Q00G26 463 aa13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 ZNF568Q3ZCX4 644 aa13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 NSUN7Q8NE18 718 aaKnown RBP13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 CUEDC2Q9H467 287 aa13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 BABAM1Q9NWV8 329 aa13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 S100A5P33763 92 aa13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 PGM1P36871 562 aa13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 WASHC5Q12768 1159 aa13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 RARS2Q5T160 578 aaKnown RBP13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 KHDRBS2Q5VWX1 349 aaKnown RBP13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 CC2D1AQ6P1N0 951 aaPredicted RBP13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 FGD2Q7Z6J4 655 aa13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 RHPN2Q8IUC4 686 aa13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 PGBD3Q8N328 593 aa13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 ZNF555Q8NEP9 628 aa13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 PPP1R14AQ96A00 147 aa13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 PRMT1Q99873 361 aaKnown RBP13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 USP44Q9H0E7 712 aa13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 GMNCA6NCL1 334 aa13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 NBPF26B4DH59 902 aa13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 CHL1O00533 1208 aa13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 NBPF15Q8N660 670 aa13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 ZNF341Q9BYN7 854 aa13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 MAGEF1Q9HAY2 307 aa13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 EFCAB5A4FU69 1503 aa13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 LAD1O00515 517 aa13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 MMP1P03956 469 aa13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 CCNE1P24864 410 aa13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 HMOX2P30519 316 aa13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 MAPRE1Q15691 268 aaKnown RBP13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 AK8Q96MA6 479 aa13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 THAP9Q9H5L6 903 aa13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 PER1O15534 1290 aaPredicted RBP13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 LAYNQ6UX15 382 aa13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 KDM4CQ9H3R0 1056 aa13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 RGL1Q9NZL6 768 aa13.19□□□□□ -0.3
ARFGEF1-201ENST00000262215 PODXLO00592 558 aa13.18□□□□□ -0.3
ARFGEF1-201ENST00000262215 CYP21A2P08686 494 aa13.18□□□□□ -0.3
ARFGEF1-201ENST00000262215 ARHGAP17Q68EM7 881 aa13.18□□□□□ -0.3
ARFGEF1-201ENST00000262215 CYFIP1Q7L576 1253 aa13.18□□□□□ -0.3
ARFGEF1-201ENST00000262215 LONP2Q86WA8 852 aa13.18□□□□□ -0.3
ARFGEF1-201ENST00000262215 DYRK4Q9NR20 520 aa13.18□□□□□ -0.3
ARFGEF1-201ENST00000262215 H2AFY2Q9P0M6 372 aaPredicted RBP13.18□□□□□ -0.3
ARFGEF1-201ENST00000262215 SATB2Q9UPW6 733 aa13.18□□□□□ -0.3
ARFGEF1-201ENST00000262215 POTEMA6NI47 508 aa13.18□□□□□ -0.3
ARFGEF1-201ENST00000262215 NLRP11P59045 1033 aaKnown RBP13.18□□□□□ -0.3
ARFGEF1-201ENST00000262215 KIF23Q02241 960 aaPredicted RBP13.18□□□□□ -0.3
ARFGEF1-201ENST00000262215 MAP3K10Q02779 954 aa13.18□□□□□ -0.3
ARFGEF1-201ENST00000262215 ANKS3Q6ZW76 656 aa13.18□□□□□ -0.3
ARFGEF1-201ENST00000262215 ANGPT2O15123 496 aa13.18□□□□□ -0.3
ARFGEF1-201ENST00000262215 CYTH3O43739 400 aa13.18□□□□□ -0.3
ARFGEF1-201ENST00000262215 NLRP9Q7RTR0 991 aa13.18□□□□□ -0.3
ARFGEF1-201ENST00000262215 PID1Q7Z2X4 250 aa13.18□□□□□ -0.3
ARFGEF1-201ENST00000262215 CENPTQ96BT3 561 aa13.18□□□□□ -0.3
ARFGEF1-201ENST00000262215 CSE1LP55060 971 aaKnown RBP13.18□□□□□ -0.3
ARFGEF1-201ENST00000262215 GUCY1A3Q02108 690 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms