RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 PFKFB3Q16875 520 aaPredicted RBP8.71□□□□□ -1.01
APOB-201ENST00000233242 MFN1Q8IWA4 741 aa8.71□□□□□ -1.01
APOB-201ENST00000233242 AMACRQ9UHK6 382 aa8.71□□□□□ -1.01
APOB-201ENST00000233242 PLA2G4AP47712 749 aa8.71□□□□□ -1.02
APOB-201ENST00000233242 NCAPHQ15003 741 aa8.71□□□□□ -1.02
APOB-201ENST00000233242 MTHFD1LQ6UB35 978 aa8.71□□□□□ -1.02
APOB-201ENST00000233242 MYLK4Q86YV6 388 aaPredicted RBP8.71□□□□□ -1.02
APOB-201ENST00000233242 SH2D3CQ8N5H7 860 aa8.71□□□□□ -1.02
APOB-201ENST00000233242 MRPL1Q9BYD6 325 aaKnown RBP8.71□□□□□ -1.02
APOB-201ENST00000233242 FRMD8Q9BZ67 464 aaPredicted RBP8.71□□□□□ -1.02
APOB-201ENST00000233242 SCTRP47872 440 aa8.71□□□□□ -1.02
APOB-201ENST00000233242 RASGRF1Q13972 1273 aa8.71□□□□□ -1.02
APOB-201ENST00000233242 ITPRIPL1Q6GPH6 555 aa8.71□□□□□ -1.02
APOB-201ENST00000233242 MIS18BP1Q6P0N0 1132 aa8.71□□□□□ -1.02
APOB-201ENST00000233242 SERPINB12Q96P63 405 aa8.71□□□□□ -1.02
APOB-201ENST00000233242 GINS2Q9Y248 185 aa8.71□□□□□ -1.02
APOB-201ENST00000233242 ARHGEF5Q12774 1597 aa8.71□□□□□ -1.02
APOB-201ENST00000233242 NPR1P16066 1061 aa8.71□□□□□ -1.02
APOB-201ENST00000233242 ZCWPW2Q504Y3 356 aa8.71□□□□□ -1.02
APOB-201ENST00000233242 CDKL3Q8IVW4 592 aaPredicted RBP8.71□□□□□ -1.02
APOB-201ENST00000233242 PRDM15P57071 1507 aaPredicted RBP8.71□□□□□ -1.02
APOB-201ENST00000233242 LDHAP00338 332 aaKnown RBP8.71□□□□□ -1.02
APOB-201ENST00000233242 WLSQ5T9L3 541 aa8.71□□□□□ -1.02
APOB-201ENST00000233242 CCDC90BQ9GZT6 254 aa8.71□□□□□ -1.02
APOB-201ENST00000233242 BFARQ9NZS9 450 aa8.71□□□□□ -1.02
APOB-201ENST00000233242 CDY2AQ9Y6F7 541 aa8.71□□□□□ -1.02
APOB-201ENST00000233242 CDY1Q9Y6F8 540 aa8.71□□□□□ -1.02
APOB-201ENST00000233242 TMEM120BA0PK00 339 aa8.71□□□□□ -1.02
APOB-201ENST00000233242 NCK2O43639 380 aa8.71□□□□□ -1.02
APOB-201ENST00000233242 LRRC14Q15048 493 aa8.71□□□□□ -1.02
APOB-201ENST00000233242 SYCP2LQ5T4T6 812 aa8.71□□□□□ -1.02
APOB-201ENST00000233242 ABCF3Q9NUQ8 709 aa8.71□□□□□ -1.02
APOB-201ENST00000233242 COASYQ13057 564 aa8.71□□□□□ -1.02
APOB-201ENST00000233242 LRRC24Q50LG9 513 aa8.71□□□□□ -1.02
APOB-201ENST00000233242 ZNF710Q8N1W2 664 aa8.71□□□□□ -1.02
APOB-201ENST00000233242 ERVK-7P63135 1459 aa8.71□□□□□ -1.02
APOB-201ENST00000233242 PRLRP16471 622 aa8.71□□□□□ -1.02
APOB-201ENST00000233242 KRT17Q04695 432 aa8.71□□□□□ -1.02
APOB-201ENST00000233242 KDSRQ06136 332 aa8.71□□□□□ -1.02
APOB-201ENST00000233242 KYNUQ16719 465 aa8.71□□□□□ -1.02
APOB-201ENST00000233242 LRRC31Q6UY01 552 aa8.71□□□□□ -1.02
APOB-201ENST00000233242 METTL16Q86W50 562 aaKnown RBP8.71□□□□□ -1.02
APOB-201ENST00000233242 PCYOX1LQ8NBM8 494 aa8.71□□□□□ -1.02
APOB-201ENST00000233242 OLFML3Q9NRN5 406 aa8.71□□□□□ -1.02
APOB-201ENST00000233242 MLH3Q9UHC1 1453 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 SRGAP2CP0DJJ0 459 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 DRAP1Q14919 205 aaPredicted RBP8.7□□□□□ -1.02
APOB-201ENST00000233242 SGMS1Q86VZ5 419 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 TC2NQ8N9U0 490 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 TUBGCP3Q96CW5 907 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 CLMNQ96JQ2 1002 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 NOD1Q9Y239 953 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 A1BGP04217 495 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 SLC5A4Q9NY91 659 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 LZTS1Q9Y250 596 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 CCDC195A0A1B0GUA6 201 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 BTDP43251 543 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 ARMCX2Q7L311 632 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 TRIM69Q86WT6 500 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 TFCP2L1Q9NZI6 479 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 ROR1Q01973 937 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 RUNX1T1Q06455 604 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 SLC12A1Q13621 1099 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 CYP4F11Q9HBI6 524 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 RGL1Q9NZL6 768 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 LRCH1Q9Y2L9 728 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 LRRC8EQ6NSJ5 796 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 TRAPPC11Q7Z392 1133 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 NLRP10Q86W26 655 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 EPS8L2Q9H6S3 715 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 CCDC78A2IDD5 438 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 WDR47O94967 919 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 ENO1P06733 434 aaKnown RBP8.7□□□□□ -1.02
APOB-201ENST00000233242 NAB2Q15742 525 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 MB21D2Q8IYB1 491 aaPredicted RBP8.7□□□□□ -1.02
APOB-201ENST00000233242 CCNYL1Q8N7R7 359 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 RASGRP4Q8TDF6 673 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 COG4Q9H9E3 785 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 THRAP3Q9Y2W1 955 aaKnown RBP8.7□□□□□ -1.02
APOB-201ENST00000233242 ANGPT2O15123 496 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 EIF3DO15371 548 aaKnown RBP eCLIP8.7□□□□□ -1.02
APOB-201ENST00000233242 FGFR4P22455 802 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 ZNF483Q8TF39 744 aaPredicted RBP8.7□□□□□ -1.02
APOB-201ENST00000233242 ZBTB10Q96DT7 871 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 BEGAINQ9BUH8 593 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 ATP7AQ04656 1500 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 FNTAP49354 379 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 STX3Q13277 289 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 CC2D2BQ6DHV5 1058 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 LRRC47Q8N1G4 583 aaKnown RBP8.7□□□□□ -1.02
APOB-201ENST00000233242 TNIP2Q8NFZ5 429 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 CARD9Q9H257 536 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 GPBP1L1Q9HC44 474 aaPredicted RBP8.7□□□□□ -1.02
APOB-201ENST00000233242 GTSE1Q9NYZ3 720 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 FIS1Q9Y3D6 152 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 CDHR2Q9BYE9 1310 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 SIX6OS1Q8N1H7 587 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 CCSER1Q9C0I3 900 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 ADGRA3Q8IWK6 1321 aa8.7□□□□□ -1.02
APOB-201ENST00000233242 ANP32DO95626 131 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms