RNA–Protein interactions for RNA: tP(UGG)A

TRN1, Transcript of Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis, yeastyeast

Gene TRN1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRN1tP(UGG)A PEP4P07267 405 aaKnown RBP14.06□□□□□ -0.16
TRN1tP(UGG)A ENA1P13587 1091 aa14.06□□□□□ -0.16
TRN1tP(UGG)A PDX1P16451 410 aa14.06□□□□□ -0.16
TRN1tP(UGG)A ATS1P31386 333 aa14.06□□□□□ -0.16
TRN1tP(UGG)A MDM31P38880 579 aa14.06□□□□□ -0.16
TRN1tP(UGG)A ENA2Q01896 1091 aa14.06□□□□□ -0.16
TRN1tP(UGG)A SPC19Q03954 165 aa14.06□□□□□ -0.16
TRN1tP(UGG)A YPL272CQ08984 517 aa14.06□□□□□ -0.16
TRN1tP(UGG)A ENA5Q12691 1091 aa14.06□□□□□ -0.16
TRN1tP(UGG)A Q0144Q9ZZW2 109 aa14.06□□□□□ -0.16
TRN1tP(UGG)A RAS1P01119 309 aa14.05□□□□□ -0.16
TRN1tP(UGG)A PHO80P20052 293 aa14.05□□□□□ -0.16
TRN1tP(UGG)A SSY5P47002 699 aa14.05□□□□□ -0.16
TRN1tP(UGG)A NUP49Q02199 472 aa14.05□□□□□ -0.16
TRN1tP(UGG)A RNH1Q04740 348 aa14.05□□□□□ -0.16
TRN1tP(UGG)A EMG1Q06287 252 aaKnown RBP14.05□□□□□ -0.16
TRN1tP(UGG)A YOR289WQ12012 251 aaPredicted RBP14.05□□□□□ -0.16
TRN1tP(UGG)A PCL9Q12477 304 aa14.05□□□□□ -0.16
TRN1tP(UGG)A YAL064W-BO13512 126 aa14.04□□□□□ -0.16
TRN1tP(UGG)A GAS1P22146 559 aaKnown RBP14.04□□□□□ -0.16
TRN1tP(UGG)A VMA6P32366 345 aaKnown RBP14.04□□□□□ -0.16
TRN1tP(UGG)A YME2P32843 850 aa14.04□□□□□ -0.16
TRN1tP(UGG)A PAD1P33751 242 aaKnown RBP RIP-Chip data14.04□□□□□ -0.16not detected
TRN1tP(UGG)A AIM10P39965 576 aaKnown RBP14.04□□□□□ -0.16
TRN1tP(UGG)A SRP1Q02821 542 aaKnown RBP14.04□□□□□ -0.16
TRN1tP(UGG)A SCS7Q03529 384 aa14.04□□□□□ -0.16
TRN1tP(UGG)A ARP10Q04549 284 aa14.04□□□□□ -0.16
TRN1tP(UGG)A SFG1Q12507 346 aa14.04□□□□□ -0.16
TRN1tP(UGG)A FLO9P39712 1322 aa14.04□□□□□ -0.16
TRN1tP(UGG)A SEC16P48415 2195 aaKnown RBP14.03□□□□□ -0.16
TRN1tP(UGG)A IPP1P00817 287 aaKnown RBP14.03□□□□□ -0.16
TRN1tP(UGG)A PBS2P08018 668 aa14.03□□□□□ -0.16
TRN1tP(UGG)A MDH2P22133 377 aa14.03□□□□□ -0.16
TRN1tP(UGG)A NFS1P25374 497 aa14.03□□□□□ -0.16
TRN1tP(UGG)A YCL002CP25565 263 aa14.03□□□□□ -0.16
TRN1tP(UGG)A PRY1P47032 299 aa14.03□□□□□ -0.16
TRN1tP(UGG)A MNN5P46982 586 aa14.02□□□□□ -0.17
TRN1tP(UGG)A BPL1P48445 690 aaPredicted RBP14.02□□□□□ -0.17
TRN1tP(UGG)A MNT4P53745 580 aa14.02□□□□□ -0.17
TRN1tP(UGG)A TAZ1Q06510 381 aa14.02□□□□□ -0.17
TRN1tP(UGG)A YPR147CQ06522 304 aaKnown RBP14.02□□□□□ -0.17
TRN1tP(UGG)A YDL218WQ07629 317 aa14.02□□□□□ -0.17
TRN1tP(UGG)A STE12P13574 688 aa14.01□□□□□ -0.17
TRN1tP(UGG)A CHK1P38147 527 aa14.01□□□□□ -0.17
TRN1tP(UGG)A RFC4P40339 323 aaKnown RBP14.01□□□□□ -0.17
TRN1tP(UGG)A FDC1Q03034 503 aa14.01□□□□□ -0.17
TRN1tP(UGG)A PRP3Q03338 469 aaPredicted RBP14.01□□□□□ -0.17
TRN1tP(UGG)A YDL176WQ12027 708 aa14.01□□□□□ -0.17
TRN1tP(UGG)A PNS1Q12412 539 aa14.01□□□□□ -0.17
TRN1tP(UGG)A KIN28P06242 306 aa14□□□□□ -0.17
TRN1tP(UGG)A UTR1P21373 530 aa14□□□□□ -0.17
TRN1tP(UGG)A ERG9P29704 444 aa14□□□□□ -0.17
TRN1tP(UGG)A COS9P36034 407 aa14□□□□□ -0.17
TRN1tP(UGG)A MAL32P38158 584 aa14□□□□□ -0.17
TRN1tP(UGG)A PHO90P39535 881 aa14□□□□□ -0.17
TRN1tP(UGG)A MAL12P53341 584 aa14□□□□□ -0.17
TRN1tP(UGG)A YDR179W-AQ03983 463 aa14□□□□□ -0.17
TRN1tP(UGG)A VBA4Q04602 768 aaKnown RBP14□□□□□ -0.17
TRN1tP(UGG)A MRX10Q05648 414 aa14□□□□□ -0.17
TRN1tP(UGG)A NEJ1Q06148 342 aa14□□□□□ -0.17
TRN1tP(UGG)A RRP9Q06506 573 aaKnown RBP14□□□□□ -0.17
TRN1tP(UGG)A RKM1Q08961 583 aaPredicted RBP14□□□□□ -0.17
TRN1tP(UGG)A MDH1P17505 334 aaKnown RBP RIP-Chip data13.99□□□□□ -0.17not detected
TRN1tP(UGG)A MRPS28P21771 286 aa13.99□□□□□ -0.17
TRN1tP(UGG)A RPS5P26783 225 aaKnown RBP13.99□□□□□ -0.17
TRN1tP(UGG)A SUR1P33300 382 aa13.99□□□□□ -0.17
TRN1tP(UGG)A BAP2P38084 609 aa13.99□□□□□ -0.17
TRN1tP(UGG)A MLH1P38920 769 aa13.99□□□□□ -0.17
TRN1tP(UGG)A NTA1P40354 457 aa13.99□□□□□ -0.17
TRN1tP(UGG)A SFH5P47008 294 aa13.99□□□□□ -0.17
TRN1tP(UGG)A EFM3P47163 339 aa13.99□□□□□ -0.17
TRN1tP(UGG)A NUP116Q02630 1113 aa13.99□□□□□ -0.17
TRN1tP(UGG)A YGR161W-CQ3E744 92 aa13.99□□□□□ -0.17
TRN1tP(UGG)A NFT1P0CE68 1218 aa13.98□□□□□ -0.17
TRN1tP(UGG)A FPS1P23900 669 aa13.98□□□□□ -0.17
TRN1tP(UGG)A SHE1P38200 338 aa13.98□□□□□ -0.17
TRN1tP(UGG)A VBA2P38358 474 aaKnown RBP13.98□□□□□ -0.17
TRN1tP(UGG)A HIS6P40545 261 aa13.98□□□□□ -0.17
TRN1tP(UGG)A YMR315WQ04869 349 aaKnown RBP13.98□□□□□ -0.17
TRN1tP(UGG)A RBD2Q12270 262 aa13.98□□□□□ -0.17
TRN1tP(UGG)A HMS1Q12398 434 aa13.98□□□□□ -0.17
TRN1tP(UGG)A PPA2P28239 310 aa13.97□□□□□ -0.17
TRN1tP(UGG)A GAS2Q06135 555 aa13.97□□□□□ -0.17
TRN1tP(UGG)A YLR173WQ06247 608 aa13.97□□□□□ -0.17
TRN1tP(UGG)A YLR352WQ06479 807 aa13.97□□□□□ -0.17
TRN1tP(UGG)A GRE1Q08969 168 aa13.97□□□□□ -0.17
TRN1tP(UGG)A CBP6P07253 162 aaPredicted RBP13.96□□□□□ -0.17
TRN1tP(UGG)A SEC12P11655 471 aa13.96□□□□□ -0.17
TRN1tP(UGG)A CPR2P23285 205 aa13.96□□□□□ -0.17
TRN1tP(UGG)A PTC6P25646 442 aa13.96□□□□□ -0.17
TRN1tP(UGG)A MCM10P32354 571 aa13.96□□□□□ -0.17
TRN1tP(UGG)A BUR6P40096 142 aa13.96□□□□□ -0.17
TRN1tP(UGG)A RBL2P48606 106 aaKnown RBP13.96□□□□□ -0.17
TRN1tP(UGG)A RPN14P53196 417 aa13.96□□□□□ -0.17
TRN1tP(UGG)A VOA1P53262 265 aa13.96□□□□□ -0.17
TRN1tP(UGG)A BSC5P53755 489 aa13.96□□□□□ -0.17
TRN1tP(UGG)A MAK3Q03503 176 aa13.96□□□□□ -0.17
TRN1tP(UGG)A YLR346CQ06139 101 aa13.96□□□□□ -0.17
TRN1tP(UGG)A NIP7Q08962 181 aaKnown RBP13.96□□□□□ -0.17
TRN1tP(UGG)A YKR015CP36111 568 aa13.95□□□□□ -0.18
Retrieved 100 of 5,963 RNA–protein pairs in 48.4 ms