RNA–Protein interactions for RNA: YPR060C

ARO7, Transcript of Chorismate mutase, yeast

Gene ARO7, Length 771 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ARO7	YPR060C	MIM1	Q08176	113 aa		4.39	□□□□□ -1.71
ARO7	YPR060C	ASG7	P46993	209 aa		4.38	□□□□□ -1.71
ARO7	YPR060C	IGO1	P53897	168 aa		4.38	□□□□□ -1.71
ARO7	YPR060C	BUD2	P33314	1104 aa		4.37	□□□□□ -1.71
ARO7	YPR060C	CTM1	P38818	585 aa		4.37	□□□□□ -1.71
ARO7	YPR060C	SLM1	P40485	686 aa		4.37	□□□□□ -1.71
ARO7	YPR060C	FYV8	P46949	817 aa	Known RBP	4.36	□□□□□ -1.71
ARO7	YPR060C	YGL118C	P53132	145 aa		4.36	□□□□□ -1.71
ARO7	YPR060C	CAX4	P53223	239 aa		4.36	□□□□□ -1.71
ARO7	YPR060C	YLR012C	Q07927	99 aa		4.36	□□□□□ -1.71
ARO7	YPR060C	PRP46	Q12417	451 aa	Predicted RBP	4.36	□□□□□ -1.71
ARO7	YPR060C	YGR168C	P53293	376 aa		4.35	□□□□□ -1.71
ARO7	YPR060C	DIA1	P54005	336 aa		4.35	□□□□□ -1.71
ARO7	YPR060C	SHE4	P51534	789 aa		4.34	□□□□□ -1.71
ARO7	YPR060C	YGR016W	P53209	190 aa		4.34	□□□□□ -1.71
ARO7	YPR060C	TRM10	Q12400	293 aa		4.34	□□□□□ -1.71
ARO7	YPR060C	RPS23A	P0CX29	145 aa	Known RBP	4.33	□□□□□ -1.72
ARO7	YPR060C	RPS23B	P0CX30	145 aa		4.33	□□□□□ -1.72
ARO7	YPR060C	RPL18A	P0CX49	186 aa	Known RBP	4.33	□□□□□ -1.72
ARO7	YPR060C	RPL18B	P0CX50	186 aa	Known RBP	4.33	□□□□□ -1.72
ARO7	YPR060C	GAL3	P13045	520 aa		4.33	□□□□□ -1.72
ARO7	YPR060C	PET8	P38921	284 aa		4.33	□□□□□ -1.72
ARO7	YPR060C	YDR286C	Q05530	114 aa		4.33	□□□□□ -1.72
ARO7	YPR060C	YPL245W	Q12179	454 aa	Known RBP	4.33	□□□□□ -1.72
ARO7	YPR060C	TFC7	Q12415	435 aa		4.33	□□□□□ -1.72
ARO7	YPR060C	MRPL20	P22354	195 aa	Predicted RBP	4.32	□□□□□ -1.72
ARO7	YPR060C	CAJ1	P39101	391 aa		4.32	□□□□□ -1.72
ARO7	YPR060C	UBX2	Q04228	584 aa		4.32	□□□□□ -1.72
ARO7	YPR060C	INO2	P26798	304 aa		4.31	□□□□□ -1.72
ARO7	YPR060C	YJL144W	P47009	104 aa		4.31	□□□□□ -1.72
ARO7	YPR060C	YNR066C	P53752	436 aa		4.31	□□□□□ -1.72
ARO7	YPR060C	ERD1	P16151	362 aa		4.3	□□□□□ -1.72
ARO7	YPR060C	HPR1	P17629	752 aa	Known RBP	4.3	□□□□□ -1.72
ARO7	YPR060C	ASP1	P38986	381 aa	Predicted RBP	4.3	□□□□□ -1.72
ARO7	YPR060C	IRC4	Q03036	179 aa		4.3	□□□□□ -1.72
ARO7	YPR060C	STE23	Q06010	1027 aa		4.3	□□□□□ -1.72
ARO7	YPR060C	PGC1	Q08959	321 aa		4.3	□□□□□ -1.72
ARO7	YPR060C	YPL264C	Q08980	353 aa		4.3	□□□□□ -1.72
ARO7	YPR060C	YPR096C	O13587	100 aa		4.29	□□□□□ -1.72
ARO7	YPR060C	HRT1	Q08273	121 aa		4.29	□□□□□ -1.72
ARO7	YPR060C	CBP2	P03874	630 aa	Predicted RBP	4.28	□□□□□ -1.72
ARO7	YPR060C	DAL5	P15365	543 aa		4.28	□□□□□ -1.72
ARO7	YPR060C	ECM14	P38836	430 aa		4.28	□□□□□ -1.72
ARO7	YPR060C	INA22	P40576	216 aa		4.28	□□□□□ -1.72
ARO7	YPR060C	YFL040W	P43562	540 aa		4.28	□□□□□ -1.72
ARO7	YPR060C	YPS1	P32329	569 aa		4.27	□□□□□ -1.73
ARO7	YPR060C	SOP4	P39543	234 aa	Predicted RBP	4.27	□□□□□ -1.73
ARO7	YPR060C	UTP25	P40498	721 aa	Known RBP	4.27	□□□□□ -1.73
ARO7	YPR060C	ACT1	P60010	375 aa	Known RBP	4.27	□□□□□ -1.73
ARO7	YPR060C	GTO3	Q04806	366 aa		4.27	□□□□□ -1.73
ARO7	YPR060C	YDR222W	Q04925	415 aa		4.27	□□□□□ -1.73
ARO7	YPR060C	ERP3	Q12403	225 aa		4.27	□□□□□ -1.73
ARO7	YPR060C	SUR1	P33300	382 aa		4.26	□□□□□ -1.73
ARO7	YPR060C	CSI1	Q04368	295 aa		4.26	□□□□□ -1.73
ARO7	YPR060C	YPR063C	Q12160	140 aa		4.26	□□□□□ -1.73
ARO7	YPR060C	ARO4	P32449	370 aa	Known RBP	4.25	□□□□□ -1.73
ARO7	YPR060C	YHR035W	P38769	630 aa		4.25	□□□□□ -1.73
ARO7	YPR060C	YPL080C	Q02826	108 aa		4.25	□□□□□ -1.73
ARO7	YPR060C	SNX41	Q04053	625 aa		4.25	□□□□□ -1.73
ARO7	YPR060C	YOR292C	Q08743	309 aa		4.25	□□□□□ -1.73
ARO7	YPR060C	VIK1	Q12045	647 aa		4.25	□□□□□ -1.73
ARO7	YPR060C	SGT2	Q12118	346 aa	Known RBP	4.25	□□□□□ -1.73
ARO7	YPR060C	ZRT1	P32804	376 aa		4.24	□□□□□ -1.73
ARO7	YPR060C	YKL162C	P36052	402 aa		4.24	□□□□□ -1.73
ARO7	YPR060C	EDC2	P40023	145 aa	Predicted RBP	4.24	□□□□□ -1.73
ARO7	YPR060C	AIM20	P40451	204 aa		4.24	□□□□□ -1.73
ARO7	YPR060C	CDC37	P06101	506 aa	Known RBP	4.23	□□□□□ -1.73
ARO7	YPR060C	VMA2	P16140	517 aa	Known RBP	4.23	□□□□□ -1.73
ARO7	YPR060C	TPM1	P17536	199 aa	Known RBP	4.23	□□□□□ -1.73
ARO7	YPR060C	CSE1	P33307	960 aa		4.23	□□□□□ -1.73
ARO7	YPR060C	TKL2	P33315	681 aa		4.23	□□□□□ -1.73
ARO7	YPR060C	OKP1	P53298	406 aa		4.23	□□□□□ -1.73
ARO7	YPR060C	DAL81	P21657	970 aa		4.22	□□□□□ -1.73
ARO7	YPR060C	OPI1	P21957	404 aa		4.22	□□□□□ -1.73
ARO7	YPR060C	MED8	P38304	223 aa		4.22	□□□□□ -1.73
ARO7	YPR060C	YFR045W	P43617	309 aa		4.22	□□□□□ -1.73
ARO7	YPR060C	YNL040W	P53960	456 aa	Predicted RBP	4.22	□□□□□ -1.73
ARO7	YPR060C	CAB5	Q03941	241 aa		4.22	□□□□□ -1.73
ARO7	YPR060C	SEC13	Q04491	297 aa	Known RBP	4.22	□□□□□ -1.73
ARO7	YPR060C	UTP23	Q12339	254 aa	Known RBP	4.22	□□□□□ -1.73
ARO7	YPR060C	SMC2	P38989	1170 aa	Known RBP	4.21	□□□□□ -1.74
ARO7	YPR060C	BUD13	P46947	266 aa	Predicted RBP	4.21	□□□□□ -1.74
ARO7	YPR060C	DXO1	Q06349	442 aa		4.21	□□□□□ -1.74
ARO7	YPR060C	SAM4	Q08985	325 aa	Known RBP	4.21	□□□□□ -1.74
ARO7	YPR060C	IES3	Q12345	250 aa		4.21	□□□□□ -1.74
ARO7	YPR060C	LAG2	Q92325	660 aa		4.21	□□□□□ -1.74
ARO7	YPR060C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
ARO7	YPR060C	TRX1	P22217	103 aa	Known RBP	4.2	□□□□□ -1.74
ARO7	YPR060C	ALK2	P32789	676 aa	Predicted RBP	4.2	□□□□□ -1.74
ARO7	YPR060C	AIM29	P36154	155 aa		4.2	□□□□□ -1.74
ARO7	YPR060C	SDH4	P37298	181 aa		4.2	□□□□□ -1.74
ARO7	YPR060C	VPS20	Q04272	221 aa		4.2	□□□□□ -1.74
ARO7	YPR060C	VPH2	P32341	215 aa		4.19	□□□□□ -1.74
ARO7	YPR060C	GPX1	P36014	167 aa		4.19	□□□□□ -1.74
ARO7	YPR060C	MCH2	P36032	473 aa		4.19	□□□□□ -1.74
ARO7	YPR060C	END3	P39013	349 aa		4.19	□□□□□ -1.74
ARO7	YPR060C	ECO1	P43605	281 aa		4.19	□□□□□ -1.74
ARO7	YPR060C	YLR446W	Q06204	433 aa		4.19	□□□□□ -1.74
ARO7	YPR060C	DCP1	Q12517	231 aa	Predicted RBP	4.19	□□□□□ -1.74
ARO7	YPR060C	SWC5	P38326	303 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 103.2 ms