RNA–Protein interactions for RNA: YOR098C

NUP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeast

Gene NUP1, Length 3,231 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP1	YOR098C	YMC2	P38087	329 aa		4.92	□□□□□ -1.62
NUP1	YOR098C	LAG1	P38703	411 aa		4.92	□□□□□ -1.62
NUP1	YOR098C	FAA2	P39518	744 aa		4.92	□□□□□ -1.62
NUP1	YOR098C	CPR8	P53728	308 aa		4.92	□□□□□ -1.62
NUP1	YOR098C	OSH6	Q02201	448 aa		4.92	□□□□□ -1.62
NUP1	YOR098C	YDR157W	A0A023PZE8	133 aa		4.91	□□□□□ -1.62
NUP1	YOR098C	HTB1	P02293	131 aa	Known RBP	4.91	□□□□□ -1.62
NUP1	YOR098C	HTB2	P02294	131 aa		4.91	□□□□□ -1.62
NUP1	YOR098C	SNF6	P18888	332 aa		4.91	□□□□□ -1.62
NUP1	YOR098C	VPS51	P36116	164 aa		4.91	□□□□□ -1.62
NUP1	YOR098C	IST2	P38250	946 aa		4.91	□□□□□ -1.62
NUP1	YOR098C	ARG2	P40360	574 aa		4.91	□□□□□ -1.62
NUP1	YOR098C	IBA57	P47158	497 aa		4.91	□□□□□ -1.62
NUP1	YOR098C	AZR1	P50080	613 aa		4.91	□□□□□ -1.62
NUP1	YOR098C	SLX9	P53251	210 aa	Predicted RBP	4.91	□□□□□ -1.62
NUP1	YOR098C	REX4	Q08237	289 aa		4.91	□□□□□ -1.62
NUP1	YOR098C	ATP6	P00854	259 aa		4.91	□□□□□ -1.62
NUP1	YOR098C	YBR121C-A	P0C5L4	52 aa		4.91	□□□□□ -1.62
NUP1	YOR098C	HOC1	P47124	396 aa		4.91	□□□□□ -1.62
NUP1	YOR098C	MIG2	P53035	382 aa		4.91	□□□□□ -1.62
NUP1	YOR098C	YGL159W	P53110	370 aa		4.91	□□□□□ -1.62
NUP1	YOR098C	RRN9	P53437	365 aa		4.91	□□□□□ -1.62
NUP1	YOR098C	SMX3	P54999	86 aa	Predicted RBP	4.91	□□□□□ -1.62
NUP1	YOR098C	ORT1	Q12375	292 aa		4.91	□□□□□ -1.62
NUP1	YOR098C	RPL7A	P05737	244 aa	Known RBP	4.91	□□□□□ -1.62
NUP1	YOR098C	ALG7	P07286	448 aa		4.91	□□□□□ -1.62
NUP1	YOR098C	CMK2	P22517	447 aa		4.91	□□□□□ -1.62
NUP1	YOR098C	PPZ2	P33329	710 aa		4.91	□□□□□ -1.62
NUP1	YOR098C	FHL1	P39521	936 aa		4.91	□□□□□ -1.62
NUP1	YOR098C	USE1	P53146	245 aa		4.91	□□□□□ -1.62
NUP1	YOR098C	RHO4	Q00246	291 aa		4.91	□□□□□ -1.62
NUP1	YOR098C	PRM15	Q03262	622 aa		4.91	□□□□□ -1.62
NUP1	YOR098C	HER2	Q03557	464 aa		4.91	□□□□□ -1.62
NUP1	YOR098C	GPM2	Q12008	311 aa		4.91	□□□□□ -1.62
NUP1	YOR098C	RPL7B	Q12213	244 aa	Known RBP	4.91	□□□□□ -1.62
NUP1	YOR098C	FBA1	P14540	359 aa	Known RBP	4.9	□□□□□ -1.62
NUP1	YOR098C	ARF2	P19146	181 aa	Known RBP	4.9	□□□□□ -1.62
NUP1	YOR098C	DPB2	P24482	689 aa	Predicted RBP	4.9	□□□□□ -1.62
NUP1	YOR098C	VPH2	P32341	215 aa		4.9	□□□□□ -1.62
NUP1	YOR098C	MNS1	P32906	549 aa		4.9	□□□□□ -1.62
NUP1	YOR098C	YFL040W	P43562	540 aa		4.9	□□□□□ -1.62
NUP1	YOR098C	IMD3	P50095	523 aa	Known RBP	4.9	□□□□□ -1.62
NUP1	YOR098C	NBP1	P52919	319 aa	Predicted RBP	4.9	□□□□□ -1.62
NUP1	YOR098C	YPL034W	Q03083	165 aa		4.9	□□□□□ -1.62
NUP1	YOR098C	QCR7	P00128	127 aa		4.9	□□□□□ -1.63
NUP1	YOR098C	MAK32	P23060	363 aa		4.9	□□□□□ -1.63
NUP1	YOR098C	BUB3	P26449	341 aa		4.9	□□□□□ -1.63
NUP1	YOR098C	UTR4	P32626	227 aa		4.9	□□□□□ -1.63
NUP1	YOR098C	VPS21	P36017	210 aa	Known RBP	4.9	□□□□□ -1.63
NUP1	YOR098C	UBP5	P39944	805 aa		4.9	□□□□□ -1.63
NUP1	YOR098C	RTT101	P47050	842 aa		4.9	□□□□□ -1.63
NUP1	YOR098C	SOL4	P53315	255 aa		4.9	□□□□□ -1.63
NUP1	YOR098C	CDC14	Q00684	551 aa		4.9	□□□□□ -1.63
NUP1	YOR098C	RPN8	Q08723	338 aa	Known RBP	4.9	□□□□□ -1.63
NUP1	YOR098C	SIM1	P40472	476 aa		4.89	□□□□□ -1.63
NUP1	YOR098C	LST7	P53237	242 aa		4.89	□□□□□ -1.63
NUP1	YOR098C	THI7	Q05998	598 aa		4.89	□□□□□ -1.63
NUP1	YOR098C	MCH4	Q08268	501 aa		4.89	□□□□□ -1.63
NUP1	YOR098C	IES3	Q12345	250 aa		4.89	□□□□□ -1.63
NUP1	YOR098C	POM152	P39685	1337 aa		4.89	□□□□□ -1.63
NUP1	YOR098C	HIS1	P00498	297 aa	Known RBP	4.89	□□□□□ -1.63
NUP1	YOR098C	RPS13	P05756	151 aa	Known RBP	4.89	□□□□□ -1.63
NUP1	YOR098C	URE2	P23202	354 aa	Known RBP	4.89	□□□□□ -1.63
NUP1	YOR098C	COX13	P32799	129 aa		4.89	□□□□□ -1.63
NUP1	YOR098C	PEX2	P32800	271 aa		4.89	□□□□□ -1.63
NUP1	YOR098C	PDR3	P33200	976 aa		4.89	□□□□□ -1.63
NUP1	YOR098C	SPO23	P33757	523 aa		4.89	□□□□□ -1.63
NUP1	YOR098C	RCK2	P38623	610 aa		4.89	□□□□□ -1.63
NUP1	YOR098C	NPT1	P39683	429 aa	Known RBP	4.89	□□□□□ -1.63
NUP1	YOR098C	EXO1	P39875	702 aa		4.89	□□□□□ -1.63
NUP1	YOR098C	THO1	P40040	218 aa	Known RBP	4.89	□□□□□ -1.63
NUP1	YOR098C	YCH1	P42937	148 aa		4.89	□□□□□ -1.63
NUP1	YOR098C	SSU72	P53538	206 aa	Predicted RBP	4.89	□□□□□ -1.63
NUP1	YOR098C	VBA1	Q04301	562 aa		4.89	□□□□□ -1.63
NUP1	YOR098C	TOM1	Q03280	3268 aa		4.89	□□□□□ -1.63
NUP1	YOR098C	MRPL6	P32904	214 aa		4.89	□□□□□ -1.63
NUP1	YOR098C	YPT52	P36018	234 aa	Known RBP	4.89	□□□□□ -1.63
NUP1	YOR098C	YBR056W	P38081	501 aa		4.89	□□□□□ -1.63
NUP1	YOR098C	CBR1	P38626	284 aa	Known RBP	4.89	□□□□□ -1.63
NUP1	YOR098C	TIS11	P47977	285 aa		4.89	□□□□□ -1.63
NUP1	YOR098C	GET1	P53192	235 aa		4.89	□□□□□ -1.63
NUP1	YOR098C	YGR035C	P53222	116 aa		4.89	□□□□□ -1.63
NUP1	YOR098C	GPI1	P53306	609 aa		4.89	□□□□□ -1.63
NUP1	YOR098C	SKI7	Q08491	747 aa	Predicted RBP	4.89	□□□□□ -1.63
NUP1	YOR098C	YLR462W	O13556	202 aa		4.88	□□□□□ -1.63
NUP1	YOR098C	MAK31	P23059	88 aa		4.88	□□□□□ -1.63
NUP1	YOR098C	DBP7	P36120	742 aa	Known RBP	4.88	□□□□□ -1.63
NUP1	YOR098C	YHL049C	P38722	271 aa		4.88	□□□□□ -1.63
NUP1	YOR098C	YEL075C	P39972	122 aa		4.88	□□□□□ -1.63
NUP1	YOR098C	YER189W	P40104	122 aa		4.88	□□□□□ -1.63
NUP1	YOR098C	YFL064C	P43540	174 aa		4.88	□□□□□ -1.63
NUP1	YOR098C	CSM3	Q04659	317 aa		4.88	□□□□□ -1.63
NUP1	YOR098C	DIC1	Q06143	298 aa		4.88	□□□□□ -1.63
NUP1	YOR098C	SRL2	Q12020	392 aa		4.88	□□□□□ -1.63
NUP1	YOR098C	RFA3	P26755	122 aa	Known RBP	4.88	□□□□□ -1.63
NUP1	YOR098C	ECM15	P35195	104 aa		4.88	□□□□□ -1.63
NUP1	YOR098C	YKR073C	P36153	106 aa		4.88	□□□□□ -1.63
NUP1	YOR098C	FLO10	P36170	1169 aa		4.88	□□□□□ -1.63
NUP1	YOR098C	FES1	P38260	290 aa		4.88	□□□□□ -1.63
NUP1	YOR098C	TRM5	P38793	499 aa		4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 70.9 ms