RNA–Protein interactions for RNA: YLR412W

BER1, Transcript of Protein involved in microtubule-related processes, yeastyeast

Gene BER1, Length 825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BER1YLR412W CSI1Q04368 295 aa1.76□□□□□ -2.13
BER1YLR412W DBP9Q06218 594 aaKnown RBP1.76□□□□□ -2.13
BER1YLR412W SGT2Q12118 346 aaKnown RBP1.76□□□□□ -2.13
BER1YLR412W IES3Q12345 250 aa1.76□□□□□ -2.13
BER1YLR412W TRM10Q12400 293 aa1.76□□□□□ -2.13
BER1YLR412W SPO24Q3E752 67 aa1.76□□□□□ -2.13
BER1YLR412W MET2P08465 486 aa1.75□□□□□ -2.13
BER1YLR412W CTM1P38818 585 aa1.75□□□□□ -2.13
BER1YLR412W SCC4P40090 624 aa1.75□□□□□ -2.13
BER1YLR412W BTT1P40314 149 aaPredicted RBP1.75□□□□□ -2.13
BER1YLR412W ECO1P43605 281 aa1.75□□□□□ -2.13
BER1YLR412W BUD13P46947 266 aaPredicted RBP1.75□□□□□ -2.13
BER1YLR412W HSH155P49955 971 aaKnown RBP1.75□□□□□ -2.13
BER1YLR412W PXR1P53335 271 aaPredicted RBP1.75□□□□□ -2.13
BER1YLR412W YPL080CQ02826 108 aa1.75□□□□□ -2.13
BER1YLR412W RLP24Q07915 199 aaKnown RBP1.75□□□□□ -2.13
BER1YLR412W RDL2Q08742 149 aaKnown RBP1.75□□□□□ -2.13
BER1YLR412W PRM4Q12498 284 aa1.75□□□□□ -2.13
BER1YLR412W NBL1Q3E7Y6 73 aa1.75□□□□□ -2.13
BER1YLR412W CBP2P03874 630 aaPredicted RBP1.74□□□□□ -2.13
BER1YLR412W MEI5P32489 222 aa1.74□□□□□ -2.13
BER1YLR412W MED8P38304 223 aa1.74□□□□□ -2.13
BER1YLR412W PET8P38921 284 aa1.74□□□□□ -2.13
BER1YLR412W YIL089WP40500 205 aa1.74□□□□□ -2.13
BER1YLR412W CUE3P53137 624 aaKnown RBP1.74□□□□□ -2.13
BER1YLR412W ACT1P60010 375 aaKnown RBP1.74□□□□□ -2.13
BER1YLR412W YDR114CQ04597 100 aa1.74□□□□□ -2.13
BER1YLR412W DTD1Q07648 150 aaKnown RBP1.74□□□□□ -2.13
BER1YLR412W NFI1Q12216 726 aa1.74□□□□□ -2.13
BER1YLR412W KRE1P17260 313 aa1.73□□□□□ -2.13
BER1YLR412W RBK1P25332 333 aa1.73□□□□□ -2.13
BER1YLR412W BUD2P33314 1104 aa1.73□□□□□ -2.13
BER1YLR412W YKR032WP36127 104 aa1.73□□□□□ -2.13
BER1YLR412W FYV8P46949 817 aaKnown RBP1.73□□□□□ -2.13
BER1YLR412W TAF6P53040 516 aa1.73□□□□□ -2.13
BER1YLR412W YNR066CP53752 436 aa1.73□□□□□ -2.13
BER1YLR412W YNL146WP53906 100 aa1.73□□□□□ -2.13
BER1YLR412W RCF1Q03713 159 aa1.73□□□□□ -2.13
BER1YLR412W CLP1Q08685 445 aaPredicted RBP1.73□□□□□ -2.13
BER1YLR412W YPL245WQ12179 454 aaKnown RBP1.73□□□□□ -2.13
BER1YLR412W ERP3Q12403 225 aa1.73□□□□□ -2.13
BER1YLR412W TDH2P00358 332 aaKnown RBP1.72□□□□□ -2.13
BER1YLR412W TDH3P00359 332 aaKnown RBP RIP-Chip data1.72□□□□□ -2.13 RIP-Chip
BER1YLR412W POT1P27796 417 aaKnown RBP RIP-Chip data1.72□□□□□ -2.13not detected
BER1YLR412W SUR1P33300 382 aa1.72□□□□□ -2.13
BER1YLR412W EDC2P40023 145 aaPredicted RBP1.72□□□□□ -2.13
BER1YLR412W YGL114WP53134 725 aa1.72□□□□□ -2.13
BER1YLR412W YNL040WP53960 456 aaPredicted RBP1.72□□□□□ -2.13
BER1YLR412W TAL1P15019 335 aaKnown RBP1.71□□□□□ -2.14
BER1YLR412W ERD1P16151 362 aa1.71□□□□□ -2.14
BER1YLR412W CDC42P19073 191 aa1.71□□□□□ -2.14
BER1YLR412W VMA5P31412 392 aaKnown RBP1.71□□□□□ -2.14
BER1YLR412W CSE1P33307 960 aa1.71□□□□□ -2.14
BER1YLR412W SIF2P38262 535 aa1.71□□□□□ -2.14
BER1YLR412W YER084WP40057 128 aa1.71□□□□□ -2.14
BER1YLR412W BUR2Q05949 395 aa1.71□□□□□ -2.14
BER1YLR412W YLR012CQ07927 99 aa1.71□□□□□ -2.14
BER1YLR412W PML1Q07930 204 aaPredicted RBP1.71□□□□□ -2.14
BER1YLR412W MRX4Q12467 430 aa1.71□□□□□ -2.14
BER1YLR412W PRE7P23724 241 aaKnown RBP1.7□□□□□ -2.14
BER1YLR412W ACB1P31787 87 aa1.7□□□□□ -2.14
BER1YLR412W RGM1Q00453 211 aa1.7□□□□□ -2.14
BER1YLR412W RVB1Q03940 463 aaKnown RBP1.7□□□□□ -2.14
BER1YLR412W YOR292CQ08743 309 aa1.7□□□□□ -2.14
BER1YLR412W YDR262WQ12331 272 aa1.7□□□□□ -2.14
BER1YLR412W RSA4P25382 515 aaKnown RBP1.69□□□□□ -2.14
BER1YLR412W UFD1P53044 361 aa1.69□□□□□ -2.14
BER1YLR412W UBX2Q04228 584 aa1.69□□□□□ -2.14
BER1YLR412W MED6P38782 295 aa1.68□□□□□ -2.14
BER1YLR412W YER188WP40103 239 aa1.68□□□□□ -2.14
BER1YLR412W YGR016WP53209 190 aa1.68□□□□□ -2.14
BER1YLR412W YGR168CP53293 376 aa1.68□□□□□ -2.14
BER1YLR412W SEC13Q04491 297 aaKnown RBP1.68□□□□□ -2.14
BER1YLR412W CDD1Q06549 142 aa1.68□□□□□ -2.14
BER1YLR412W FEX1Q08913 375 aa1.68□□□□□ -2.14
BER1YLR412W FEX2Q08991 375 aa1.68□□□□□ -2.14
BER1YLR412W VIK1Q12045 647 aa1.68□□□□□ -2.14
BER1YLR412W YAK1P14680 807 aa1.67□□□□□ -2.14
BER1YLR412W SNF6P18888 332 aa1.67□□□□□ -2.14
BER1YLR412W AIM29P36154 155 aa1.67□□□□□ -2.14
BER1YLR412W YBL081WP38180 368 aaKnown RBP1.67□□□□□ -2.14
BER1YLR412W SOP4P39543 234 aaPredicted RBP1.67□□□□□ -2.14
BER1YLR412W ARC18Q05933 178 aaKnown RBP1.67□□□□□ -2.14
BER1YLR412W PEX30Q06169 523 aa1.67□□□□□ -2.14
BER1YLR412W PSY3Q12318 242 aa1.67□□□□□ -2.14
BER1YLR412W YOL163WP0CF20 169 aa1.66□□□□□ -2.14
BER1YLR412W RPL18AP0CX49 186 aaKnown RBP1.66□□□□□ -2.14
BER1YLR412W RPL18BP0CX50 186 aaKnown RBP1.66□□□□□ -2.14
BER1YLR412W GPX1P36014 167 aa1.66□□□□□ -2.14
BER1YLR412W YBR062CP38239 180 aa1.66□□□□□ -2.14
BER1YLR412W ATG12P38316 186 aa1.66□□□□□ -2.14
BER1YLR412W LIN1P38852 340 aaPredicted RBP1.66□□□□□ -2.14
BER1YLR412W YFL040WP43562 540 aa1.66□□□□□ -2.14
BER1YLR412W PDR16P53860 351 aaKnown RBP1.66□□□□□ -2.14
BER1YLR412W IRC4Q03036 179 aa1.66□□□□□ -2.14
BER1YLR412W SNX41Q04053 625 aa1.66□□□□□ -2.14
BER1YLR412W YPL278CQ08990 100 aa1.66□□□□□ -2.14
BER1YLR412W RNR2P09938 399 aaKnown RBP1.65□□□□□ -2.15
BER1YLR412W YEL043WP32618 956 aa1.65□□□□□ -2.15
BER1YLR412W MRPL6P32904 214 aa1.65□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 106.9 ms