RNA–Protein interactions for RNA: YLR411W

CTR3, Transcript of High-affinity copper transporter of the plasma membrane, yeast

Gene CTR3, Length 726 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTR3	YLR411W	NMD4	Q12129	218 aa		4.88	□□□□□ -1.63
CTR3	YLR411W	SIA1	Q12212	622 aa		4.88	□□□□□ -1.63
CTR3	YLR411W	RPN5	Q12250	445 aa	Known RBP	4.88	□□□□□ -1.63
CTR3	YLR411W	YOR214C	Q12282	236 aa		4.88	□□□□□ -1.63
CTR3	YLR411W	MHT1	Q12525	324 aa		4.88	□□□□□ -1.63
CTR3	YLR411W	DST1	P07273	309 aa		4.87	□□□□□ -1.63
CTR3	YLR411W	PUT2	P07275	575 aa		4.87	□□□□□ -1.63
CTR3	YLR411W	SAR1	P20606	190 aa	Known RBP	4.87	□□□□□ -1.63
CTR3	YLR411W	MCM10	P32354	571 aa		4.87	□□□□□ -1.63
CTR3	YLR411W	HYM1	P32464	399 aa		4.87	□□□□□ -1.63
CTR3	YLR411W	SGE1	P33335	543 aa		4.87	□□□□□ -1.63
CTR3	YLR411W	ZRT3	P34240	503 aa		4.87	□□□□□ -1.63
CTR3	YLR411W	MDM31	P38880	579 aa		4.87	□□□□□ -1.63
CTR3	YLR411W	AFG3	P39925	761 aa		4.87	□□□□□ -1.63
CTR3	YLR411W	RRG9	P40156	214 aa		4.87	□□□□□ -1.63
CTR3	YLR411W	YIL169C	P40442	995 aa		4.87	□□□□□ -1.63
CTR3	YLR411W	YKE4	P40544	346 aa		4.87	□□□□□ -1.63
CTR3	YLR411W	YJL218W	P40892	196 aa	Known RBP	4.87	□□□□□ -1.63
CTR3	YLR411W	GDS1	P41913	522 aa		4.87	□□□□□ -1.63
CTR3	YLR411W	MEP2	P41948	499 aa		4.87	□□□□□ -1.63
CTR3	YLR411W	MNN5	P46982	586 aa		4.87	□□□□□ -1.63
CTR3	YLR411W	YAE1	P47118	141 aa	Predicted RBP	4.87	□□□□□ -1.63
CTR3	YLR411W	BSC5	P53755	489 aa		4.87	□□□□□ -1.63
CTR3	YLR411W	YNL260C	P53846	198 aa		4.87	□□□□□ -1.63
CTR3	YLR411W	YNL234W	P53857	426 aa		4.87	□□□□□ -1.63
CTR3	YLR411W	YNL143C	P53908	130 aa		4.87	□□□□□ -1.63
CTR3	YLR411W	YSA1	Q01976	231 aa		4.87	□□□□□ -1.63
CTR3	YLR411W	TDA1	Q03533	586 aa		4.87	□□□□□ -1.63
CTR3	YLR411W	YMR254C	Q04838	102 aa		4.87	□□□□□ -1.63
CTR3	YLR411W	SPO77	Q06134	477 aa		4.87	□□□□□ -1.63
CTR3	YLR411W	YPL199C	Q08954	240 aa		4.87	□□□□□ -1.63
CTR3	YLR411W	ATG29	Q12092	213 aa		4.87	□□□□□ -1.63
CTR3	YLR411W	ATP16	Q12165	160 aa		4.87	□□□□□ -1.63
CTR3	YLR411W	PEX11	Q12462	236 aa		4.87	□□□□□ -1.63
CTR3	YLR411W	SNF8	Q12483	233 aa		4.87	□□□□□ -1.63
CTR3	YLR411W	TIM9	O74700	87 aa		4.86	□□□□□ -1.63
CTR3	YLR411W	YAR066W	P0CX18	203 aa		4.86	□□□□□ -1.63
CTR3	YLR411W	YHR214W	P0CX19	203 aa		4.86	□□□□□ -1.63
CTR3	YLR411W	RPB8	P20436	146 aa		4.86	□□□□□ -1.63
CTR3	YLR411W	RPS1B	P23248	255 aa	Known RBP	4.86	□□□□□ -1.63
CTR3	YLR411W	SGV1	P23293	657 aa	Known RBP	4.86	□□□□□ -1.63
CTR3	YLR411W	MNE1	P24720	663 aa		4.86	□□□□□ -1.63
CTR3	YLR411W	ATG22	P25568	528 aa		4.86	□□□□□ -1.63
CTR3	YLR411W	YBR063C	P38083	404 aa		4.86	□□□□□ -1.63
CTR3	YLR411W	SBE22	P38814	852 aa		4.86	□□□□□ -1.63
CTR3	YLR411W	VMA7	P39111	118 aa		4.86	□□□□□ -1.63
CTR3	YLR411W	RTT105	P40063	208 aa		4.86	□□□□□ -1.63
CTR3	YLR411W	BTT1	P40314	149 aa	Predicted RBP	4.86	□□□□□ -1.63
CTR3	YLR411W	UFE1	P41834	346 aa		4.86	□□□□□ -1.63
CTR3	YLR411W	YGR201C	P42936	225 aa		4.86	□□□□□ -1.63
CTR3	YLR411W	IRC18	P47056	224 aa		4.86	□□□□□ -1.63
CTR3	YLR411W	TIS11	P47977	285 aa		4.86	□□□□□ -1.63
CTR3	YLR411W	DIE2	P50076	525 aa		4.86	□□□□□ -1.63
CTR3	YLR411W	MDM34	P53083	459 aa		4.86	□□□□□ -1.63
CTR3	YLR411W	MPS2	P53159	387 aa		4.86	□□□□□ -1.63
CTR3	YLR411W	MRH4	P53166	561 aa		4.86	□□□□□ -1.63
CTR3	YLR411W	YNL140C	P53910	189 aa		4.86	□□□□□ -1.63
CTR3	YLR411W	MAK3	Q03503	176 aa		4.86	□□□□□ -1.63
CTR3	YLR411W	EKI1	Q03764	534 aa		4.86	□□□□□ -1.63
CTR3	YLR411W	RTN1	Q04947	295 aa	Known RBP	4.86	□□□□□ -1.63
CTR3	YLR411W	PHO92	Q06390	306 aa		4.86	□□□□□ -1.63
CTR3	YLR411W	YNG1	Q08465	219 aa		4.86	□□□□□ -1.63
CTR3	YLR411W	RAX1	Q08760	435 aa		4.86	□□□□□ -1.63
CTR3	YLR411W	MRX4	Q12467	430 aa		4.86	□□□□□ -1.63
CTR3	YLR411W	SKM1	Q12469	655 aa		4.86	□□□□□ -1.63
CTR3	YLR411W	SUS1	Q6WNK7	96 aa		4.86	□□□□□ -1.63
CTR3	YLR411W	QCR7	P00128	127 aa		4.85	□□□□□ -1.63
CTR3	YLR411W	RBK1	P25332	333 aa		4.85	□□□□□ -1.63
CTR3	YLR411W	CPR3	P25719	182 aa		4.85	□□□□□ -1.63
CTR3	YLR411W	OAC1	P32332	324 aa		4.85	□□□□□ -1.63
CTR3	YLR411W	SUR1	P33300	382 aa		4.85	□□□□□ -1.63
CTR3	YLR411W	PRP18	P33411	251 aa	Predicted RBP	4.85	□□□□□ -1.63
CTR3	YLR411W	SPO23	P33757	523 aa		4.85	□□□□□ -1.63
CTR3	YLR411W	NVJ1	P38881	321 aa		4.85	□□□□□ -1.63
CTR3	YLR411W	MLH1	P38920	769 aa		4.85	□□□□□ -1.63
CTR3	YLR411W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
CTR3	YLR411W	YIL060W	P40519	144 aa		4.85	□□□□□ -1.63
CTR3	YLR411W	ARF3	P40994	183 aa	RIP-Chip data	4.85	□□□□□ -1.63	not detected
CTR3	YLR411W	CAK1	P43568	368 aa	Predicted RBP	4.85	□□□□□ -1.63
CTR3	YLR411W	RMD8	P43620	662 aa		4.85	□□□□□ -1.63
CTR3	YLR411W	JHD2	P47156	728 aa	Predicted RBP	4.85	□□□□□ -1.63
CTR3	YLR411W	MPC1	P53157	130 aa	Known RBP	4.85	□□□□□ -1.63
CTR3	YLR411W	TRM112	P53738	135 aa	Predicted RBP	4.85	□□□□□ -1.63
CTR3	YLR411W	OAZ1	Q02803	292 aa		4.85	□□□□□ -1.63
CTR3	YLR411W	GIP3	Q03016	1276 aa		4.85	□□□□□ -1.63
CTR3	YLR411W	YLR281C	Q05863	155 aa		4.85	□□□□□ -1.63
CTR3	YLR411W	YLR283W	Q05867	314 aa		4.85	□□□□□ -1.63
CTR3	YLR411W	RRP9	Q06506	573 aa	Known RBP	4.85	□□□□□ -1.63
CTR3	YLR411W	YDL218W	Q07629	317 aa		4.85	□□□□□ -1.63
CTR3	YLR411W	YLR031W	Q07978	186 aa		4.85	□□□□□ -1.63
CTR3	YLR411W	CLP1	Q08685	445 aa	Predicted RBP	4.85	□□□□□ -1.63
CTR3	YLR411W	ATG31	Q12421	196 aa		4.85	□□□□□ -1.63
CTR3	YLR411W	MTF1	P14908	341 aa	Known RBP	4.84	□□□□□ -1.63
CTR3	YLR411W	PHO84	P25297	587 aa	Known RBP	4.84	□□□□□ -1.63
CTR3	YLR411W	BUD5	P25300	642 aa	Predicted RBP	4.84	□□□□□ -1.63
CTR3	YLR411W	PGS1	P25578	521 aa		4.84	□□□□□ -1.63
CTR3	YLR411W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
CTR3	YLR411W	ARO7	P32178	256 aa		4.84	□□□□□ -1.63
CTR3	YLR411W	SPS19	P32573	292 aa	Known RBP	4.84	□□□□□ -1.63
CTR3	YLR411W	SEC17	P32602	292 aa		4.84	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 48 ms