RNA–Protein interactions for RNA: YLR040C

AFB1, Transcript of MATalpha-specific a-factor blocker, yeastyeast

Gene AFB1, Length 675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFB1YLR040C NAS2P40555 220 aa1.79□□□□□ -2.12
AFB1YLR040C TAF6P53040 516 aa1.79□□□□□ -2.12
AFB1YLR040C YGL114WP53134 725 aa1.79□□□□□ -2.12
AFB1YLR040C YNL146WP53906 100 aa1.79□□□□□ -2.12
AFB1YLR040C ACT1P60010 375 aaKnown RBP1.79□□□□□ -2.12
AFB1YLR040C YDR222WQ04925 415 aa1.79□□□□□ -2.12
AFB1YLR040C YPR096CO13587 100 aa1.78□□□□□ -2.12
AFB1YLR040C DAL81P21657 970 aa1.78□□□□□ -2.12
AFB1YLR040C ALK2P32789 676 aaPredicted RBP1.78□□□□□ -2.12
AFB1YLR040C DXO1Q06349 442 aa1.78□□□□□ -2.12
AFB1YLR040C YDR262WQ12331 272 aa1.78□□□□□ -2.12
AFB1YLR040C VMA5P31412 392 aaKnown RBP1.77□□□□□ -2.13
AFB1YLR040C MEI5P32489 222 aa1.77□□□□□ -2.13
AFB1YLR040C PPQ1P32945 549 aa1.77□□□□□ -2.13
AFB1YLR040C APE4P38821 490 aa1.77□□□□□ -2.13
AFB1YLR040C ASP1P38986 381 aaPredicted RBP1.77□□□□□ -2.13
AFB1YLR040C YFR045WP43617 309 aa1.77□□□□□ -2.13
AFB1YLR040C YNR066CP53752 436 aa1.77□□□□□ -2.13
AFB1YLR040C PDR16P53860 351 aaKnown RBP1.77□□□□□ -2.13
AFB1YLR040C YLR012CQ07927 99 aa1.77□□□□□ -2.13
AFB1YLR040C TRM10Q12400 293 aa1.77□□□□□ -2.13
AFB1YLR040C TFC7Q12415 435 aa1.77□□□□□ -2.13
AFB1YLR040C CBP2P03874 630 aaPredicted RBP1.76□□□□□ -2.13
AFB1YLR040C RPL18AP0CX49 186 aaKnown RBP1.76□□□□□ -2.13
AFB1YLR040C RPL18BP0CX50 186 aaKnown RBP1.76□□□□□ -2.13
AFB1YLR040C RBK1P25332 333 aa1.76□□□□□ -2.13
AFB1YLR040C INO2P26798 304 aa1.76□□□□□ -2.13
AFB1YLR040C ITR2P30606 609 aa1.76□□□□□ -2.13
AFB1YLR040C YEL043WP32618 956 aa1.76□□□□□ -2.13
AFB1YLR040C LIN1P38852 340 aaPredicted RBP1.76□□□□□ -2.13
AFB1YLR040C YFL040WP43562 540 aa1.76□□□□□ -2.13
AFB1YLR040C FYV8P46949 817 aaKnown RBP1.76□□□□□ -2.13
AFB1YLR040C YGL088WP53151 121 aa1.76□□□□□ -2.13
AFB1YLR040C BUR2Q05949 395 aa1.76□□□□□ -2.13
AFB1YLR040C DTD1Q07648 150 aaKnown RBP1.76□□□□□ -2.13
AFB1YLR040C YPR063CQ12160 140 aa1.76□□□□□ -2.13
AFB1YLR040C ERP3Q12403 225 aa1.76□□□□□ -2.13
AFB1YLR040C CDC42P19073 191 aa1.75□□□□□ -2.13
AFB1YLR040C MIG1P27705 504 aa1.75□□□□□ -2.13
AFB1YLR040C ACB1P31787 87 aa1.75□□□□□ -2.13
AFB1YLR040C VPH1P32563 840 aaKnown RBP1.75□□□□□ -2.13
AFB1YLR040C SUR1P33300 382 aa1.75□□□□□ -2.13
AFB1YLR040C CTM1P38818 585 aa1.75□□□□□ -2.13
AFB1YLR040C UBX2Q04228 584 aa1.75□□□□□ -2.13
AFB1YLR040C STE23Q06010 1027 aa1.75□□□□□ -2.13
AFB1YLR040C YOR292CQ08743 309 aa1.75□□□□□ -2.13
AFB1YLR040C SGT2Q12118 346 aaKnown RBP1.75□□□□□ -2.13
AFB1YLR040C YPL245WQ12179 454 aaKnown RBP1.75□□□□□ -2.13
AFB1YLR040C IES3Q12345 250 aa1.75□□□□□ -2.13
AFB1YLR040C MET2P08465 486 aa1.74□□□□□ -2.13
AFB1YLR040C ERD1P16151 362 aa1.74□□□□□ -2.13
AFB1YLR040C SMI1P32566 505 aa1.74□□□□□ -2.13
AFB1YLR040C UTR5P32630 166 aa1.74□□□□□ -2.13
AFB1YLR040C YBR062CP38239 180 aa1.74□□□□□ -2.13
AFB1YLR040C YGR168CP53293 376 aa1.74□□□□□ -2.13
AFB1YLR040C RVB1Q03940 463 aaKnown RBP1.74□□□□□ -2.13
AFB1YLR040C TDH2P00358 332 aaKnown RBP1.73□□□□□ -2.13
AFB1YLR040C TDH3P00359 332 aaKnown RBP RIP-Chip data1.73□□□□□ -2.13not detected
AFB1YLR040C RNR2P09938 399 aaKnown RBP1.73□□□□□ -2.13
AFB1YLR040C GAL3P13045 520 aa1.73□□□□□ -2.13
AFB1YLR040C PRE7P23724 241 aaKnown RBP1.73□□□□□ -2.13
AFB1YLR040C SWI3P32591 825 aa1.73□□□□□ -2.13
AFB1YLR040C GPX1P36014 167 aa1.73□□□□□ -2.13
AFB1YLR040C YKL162CP36052 402 aa1.73□□□□□ -2.13
AFB1YLR040C SOP4P39543 234 aaPredicted RBP1.73□□□□□ -2.13
AFB1YLR040C YER084WP40057 128 aa1.73□□□□□ -2.13
AFB1YLR040C ECO1P43605 281 aa1.73□□□□□ -2.13
AFB1YLR040C HSH155P49955 971 aaKnown RBP1.73□□□□□ -2.13
AFB1YLR040C SHE4P51534 789 aa1.73□□□□□ -2.13
AFB1YLR040C YNL040WP53960 456 aaPredicted RBP1.73□□□□□ -2.13
AFB1YLR040C YPL080CQ02826 108 aa1.73□□□□□ -2.13
AFB1YLR040C YPL113CQ02961 396 aa1.73□□□□□ -2.13
AFB1YLR040C KRE1P17260 313 aa1.72□□□□□ -2.13
AFB1YLR040C YPS1P32329 569 aa1.72□□□□□ -2.13
AFB1YLR040C UIP5P36137 443 aa1.72□□□□□ -2.13
AFB1YLR040C MED8P38304 223 aa1.72□□□□□ -2.13
AFB1YLR040C EDC2P40023 145 aaPredicted RBP1.72□□□□□ -2.13
AFB1YLR040C MIX17Q03667 156 aa1.72□□□□□ -2.13
AFB1YLR040C SNX41Q04053 625 aa1.72□□□□□ -2.13
AFB1YLR040C SEC13Q04491 297 aaKnown RBP1.72□□□□□ -2.13
AFB1YLR040C SCC4P40090 624 aa1.71□□□□□ -2.14
AFB1YLR040C UFD1P53044 361 aa1.71□□□□□ -2.14
AFB1YLR040C YGR016WP53209 190 aa1.71□□□□□ -2.14
AFB1YLR040C IRC4Q03036 179 aa1.71□□□□□ -2.14
AFB1YLR040C CSI1Q04368 295 aa1.71□□□□□ -2.14
AFB1YLR040C YDR286CQ05530 114 aa1.71□□□□□ -2.14
AFB1YLR040C RLP24Q07915 199 aaKnown RBP1.71□□□□□ -2.14
AFB1YLR040C CLP1Q08685 445 aaPredicted RBP1.71□□□□□ -2.14
AFB1YLR040C YAL063C-AQ3E791 96 aa1.71□□□□□ -2.14
AFB1YLR040C YCR025CP25352 136 aa1.7□□□□□ -2.14
AFB1YLR040C YPC1P38298 316 aa1.7□□□□□ -2.14
AFB1YLR040C AIM20P40451 204 aa1.7□□□□□ -2.14
AFB1YLR040C BUD13P46947 266 aaPredicted RBP1.7□□□□□ -2.14
AFB1YLR040C YLR446WQ06204 433 aa1.7□□□□□ -2.14
AFB1YLR040C YPL278CQ08990 100 aa1.7□□□□□ -2.14
AFB1YLR040C VIK1Q12045 647 aa1.7□□□□□ -2.14
AFB1YLR040C PAA1Q12447 191 aaKnown RBP1.7□□□□□ -2.14
AFB1YLR040C ZRT1P32804 376 aa1.69□□□□□ -2.14
AFB1YLR040C CSE1P33307 960 aa1.69□□□□□ -2.14
AFB1YLR040C BLI1P35727 113 aa1.69□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 52.9 ms