RNA–Protein interactions for RNA: YIR006C

PAN1, Transcript of Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, yeast

Gene PAN1, Length 4,443 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAN1	YIR006C	COS9	P36034	407 aa		4.36	□□□□□ -1.71
PAN1	YIR006C	MIA40	P36046	403 aa		4.36	□□□□□ -1.71
PAN1	YIR006C	ALY1	P36117	915 aa		4.36	□□□□□ -1.71
PAN1	YIR006C	SSH1	P38353	490 aa	Known RBP	4.36	□□□□□ -1.71
PAN1	YIR006C	IRC7	P43623	340 aa		4.36	□□□□□ -1.71
PAN1	YIR006C	RPE1	P46969	238 aa		4.36	□□□□□ -1.71
PAN1	YIR006C	FMP48	P53233	369 aa		4.36	□□□□□ -1.71
PAN1	YIR006C	RSM23	Q01163	450 aa		4.36	□□□□□ -1.71
PAN1	YIR006C	PIR1	Q03178	341 aa		4.36	□□□□□ -1.71
PAN1	YIR006C	YDR415C	Q04033	374 aa	Predicted RBP	4.36	□□□□□ -1.71
PAN1	YIR006C	MRX8	Q05473	314 aa		4.36	□□□□□ -1.71
PAN1	YIR006C	YPQ1	Q12010	308 aa		4.36	□□□□□ -1.71
PAN1	YIR006C	ARG80	P07249	177 aa		4.36	□□□□□ -1.71
PAN1	YIR006C	HVG1	P0CE11	249 aa		4.36	□□□□□ -1.71
PAN1	YIR006C	SNF5	P18480	905 aa		4.36	□□□□□ -1.71
PAN1	YIR006C	MSS1	P32559	526 aa	Predicted RBP	4.36	□□□□□ -1.71
PAN1	YIR006C	SCO2	P38072	301 aa		4.36	□□□□□ -1.71
PAN1	YIR006C	HTD2	P38790	280 aa	Known RBP	4.36	□□□□□ -1.71
PAN1	YIR006C	TVP23	P38962	199 aa		4.36	□□□□□ -1.71
PAN1	YIR006C	IRC22	P40006	225 aa		4.36	□□□□□ -1.71
PAN1	YIR006C	GDS1	P41913	522 aa		4.36	□□□□□ -1.71
PAN1	YIR006C	BUD9	P53226	547 aa		4.36	□□□□□ -1.71
PAN1	YIR006C	BIO5	P53744	561 aa	Known RBP	4.36	□□□□□ -1.71
PAN1	YIR006C	EKI1	Q03764	534 aa		4.36	□□□□□ -1.71
PAN1	YIR006C	GAS2	Q06135	555 aa		4.36	□□□□□ -1.71
PAN1	YIR006C	FRQ1	Q06389	190 aa		4.36	□□□□□ -1.71
PAN1	YIR006C	VAM3	Q12241	283 aa		4.36	□□□□□ -1.71
PAN1	YIR006C	PST1	Q12355	444 aa		4.36	□□□□□ -1.71
PAN1	YIR006C	AGC1	Q12482	902 aa		4.36	□□□□□ -1.71
PAN1	YIR006C	ODC2	Q99297	307 aa		4.36	□□□□□ -1.71
PAN1	YIR006C	RPS17A	P02407	136 aa	Known RBP	4.36	□□□□□ -1.71
PAN1	YIR006C	ADE8	P04161	214 aa		4.36	□□□□□ -1.71
PAN1	YIR006C	RPS17B	P14127	136 aa	Known RBP	4.36	□□□□□ -1.71
PAN1	YIR006C	FUS3	P16892	353 aa	Known RBP	4.36	□□□□□ -1.71
PAN1	YIR006C	SPT14	P32363	452 aa		4.36	□□□□□ -1.71
PAN1	YIR006C	CLB6	P32943	380 aa		4.36	□□□□□ -1.71
PAN1	YIR006C	SFK1	P35735	353 aa		4.36	□□□□□ -1.71
PAN1	YIR006C	MNL1	P38888	796 aa		4.36	□□□□□ -1.71
PAN1	YIR006C	TAT2	P38967	592 aa		4.36	□□□□□ -1.71
PAN1	YIR006C	LYS1	P38998	373 aa	RIP-Chip data	4.36	□□□□□ -1.71	not detected
PAN1	YIR006C	FMP52	P40008	231 aa		4.36	□□□□□ -1.71
PAN1	YIR006C	YDR444W	Q04093	687 aa		4.36	□□□□□ -1.71
PAN1	YIR006C	GMC1	Q04399	608 aa		4.36	□□□□□ -1.71
PAN1	YIR006C	HIP1	P06775	603 aa		4.35	□□□□□ -1.71
PAN1	YIR006C	YOL162W	P0CF19	215 aa		4.35	□□□□□ -1.71
PAN1	YIR006C	MGM101	P32787	269 aa	Known RBP	4.35	□□□□□ -1.71
PAN1	YIR006C	SSS1	P35179	80 aa		4.35	□□□□□ -1.71
PAN1	YIR006C	DOA1	P36037	715 aa		4.35	□□□□□ -1.71
PAN1	YIR006C	DCW1	P36091	449 aa		4.35	□□□□□ -1.71
PAN1	YIR006C	YJR011C	P47086	261 aa	Predicted RBP	4.35	□□□□□ -1.71
PAN1	YIR006C	PDR16	P53860	351 aa	Known RBP	4.35	□□□□□ -1.71
PAN1	YIR006C	EGD1	Q02642	157 aa	Known RBP	4.35	□□□□□ -1.71
PAN1	YIR006C	ARR2	Q06597	130 aa		4.35	□□□□□ -1.71
PAN1	YIR006C	SUL2	Q12325	893 aa		4.35	□□□□□ -1.71
PAN1	YIR006C	RRI1	Q12468	440 aa		4.35	□□□□□ -1.71
PAN1	YIR006C	RIF1	P29539	1916 aa		4.35	□□□□□ -1.71
PAN1	YIR006C	UTR1	P21373	530 aa		4.35	□□□□□ -1.71
PAN1	YIR006C	SLM5	P25345	492 aa	Known RBP	4.35	□□□□□ -1.71
PAN1	YIR006C	PUT3	P25502	979 aa	Predicted RBP	4.35	□□□□□ -1.71
PAN1	YIR006C	CWH43	P25618	953 aa		4.35	□□□□□ -1.71
PAN1	YIR006C	KAE1	P36132	386 aa		4.35	□□□□□ -1.71
PAN1	YIR006C	IML3	P38265	245 aa		4.35	□□□□□ -1.71
PAN1	YIR006C	CUE1	P38428	203 aa		4.35	□□□□□ -1.71
PAN1	YIR006C	FMO1	P38866	432 aa		4.35	□□□□□ -1.71
PAN1	YIR006C	NBP35	P52920	328 aa		4.35	□□□□□ -1.71
PAN1	YIR006C	SOK2	P53438	785 aa	Predicted RBP	4.35	□□□□□ -1.71
PAN1	YIR006C	CWC27	Q02770	301 aa		4.35	□□□□□ -1.71
PAN1	YIR006C	YLR446W	Q06204	433 aa		4.35	□□□□□ -1.71
PAN1	YIR006C	YOR289W	Q12012	251 aa	Predicted RBP	4.35	□□□□□ -1.71
PAN1	YIR006C	MHT1	Q12525	324 aa		4.35	□□□□□ -1.71
PAN1	YIR006C	CTS1	P29029	562 aa		4.35	□□□□□ -1.71
PAN1	YIR006C	ERG1	P32476	496 aa	Known RBP	4.35	□□□□□ -1.71
PAN1	YIR006C	MTC2	P34246	357 aa		4.35	□□□□□ -1.71
PAN1	YIR006C	APL3	P38065	1025 aa		4.35	□□□□□ -1.71
PAN1	YIR006C	SMB1	P40018	196 aa	Known RBP	4.35	□□□□□ -1.71
PAN1	YIR006C	ZAP1	P47043	880 aa		4.35	□□□□□ -1.71
PAN1	YIR006C	RAD17	P48581	401 aa		4.35	□□□□□ -1.71
PAN1	YIR006C	YNR062C	P53748	327 aa		4.35	□□□□□ -1.71
PAN1	YIR006C	SNO2	P53823	222 aa		4.35	□□□□□ -1.71
PAN1	YIR006C	REC102	Q02721	264 aa		4.35	□□□□□ -1.71
PAN1	YIR006C	YMR090W	Q04304	227 aa	Known RBP	4.35	□□□□□ -1.71
PAN1	YIR006C	YLR108C	Q12259	485 aa		4.35	□□□□□ -1.71
PAN1	YIR006C	YNK1	P36010	153 aa	Known RBP	4.35	□□□□□ -1.71
PAN1	YIR006C	YPT35	P38815	214 aa	Known RBP	4.35	□□□□□ -1.71
PAN1	YIR006C	FAA3	P39002	694 aa		4.35	□□□□□ -1.71
PAN1	YIR006C	YER184C	P39961	794 aa		4.35	□□□□□ -1.71
PAN1	YIR006C	GID8	P40208	455 aa		4.35	□□□□□ -1.71
PAN1	YIR006C	ZIM17	P42844	174 aa		4.35	□□□□□ -1.71
PAN1	YIR006C	COQ5	P49017	307 aa		4.35	□□□□□ -1.71
PAN1	YIR006C	PMT5	P52867	743 aa		4.35	□□□□□ -1.71
PAN1	YIR006C	ARO8	P53090	500 aa	Known RBP	4.35	□□□□□ -1.71
PAN1	YIR006C	AAT1	Q01802	451 aa		4.35	□□□□□ -1.71
PAN1	YIR006C	RTK1	Q12100	620 aa	Predicted RBP	4.35	□□□□□ -1.71
PAN1	YIR006C	EAF3	Q12432	401 aa		4.35	□□□□□ -1.71
PAN1	YIR006C	RPS21B	Q3E754	87 aa	Known RBP	4.35	□□□□□ -1.71
PAN1	YIR006C	SPT3	P06844	337 aa		4.34	□□□□□ -1.71
PAN1	YIR006C	SPO7	P18410	259 aa		4.34	□□□□□ -1.71
PAN1	YIR006C	STE18	P18852	110 aa		4.34	□□□□□ -1.71
PAN1	YIR006C	RPA135	P22138	1203 aa	Known RBP	4.34	□□□□□ -1.71
PAN1	YIR006C	CPR3	P25719	182 aa		4.34	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 85.9 ms